Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p42540 Brassica napus HOM05D006306 ORTHO05D007912 9.8e-68 260.0 131 100.0
BolC9t57131H Brassica oleracea HOM05D006306 ORTHO05D007912 8.6e-64 246.9 125 100.0
BcaC04g20531 Brassica carinata HOM05D006306 ORTHO05D007912 1.6e-62 242.7 124 99.2
BcaC04g20532 Brassica carinata HOM05D006306 ORTHO05D007912 3.9e-48 194.9 120 84.2
C09p42490 Brassica napus HOM05D006306 ORTHO05D007912 1.1e-47 193.4 120 83.3
BolC9t57127H Brassica oleracea HOM05D006306 ORTHO05D007912 1.1e-47 193.4 120 83.3
BcaB08g35641 Brassica carinata HOM05D006306 ORTHO05D007912 1.1e-45 186.8 120 80.0
Carub.0008s1304 Capsella rubella HOM05D006306 ORTHO05D007912 1.7e-40 169.5 127 67.7
BcaB08g35646 Brassica carinata HOM05D006306 ORTHO05D007912 1.5e-39 166.4 117 74.4
CARHR265820 Cardamine hirsuta HOM05D006306 ORTHO05D007912 1.9e-39 166.0 128 65.6
Thhalv10014697m.g Eutrema salsugineum HOM05D006306 ORTHO05D007912 3.3e-39 165.2 127 66.9
AL8G27340 Arabidopsis lyrata HOM05D006306 ORTHO05D007912 9.6e-39 163.7 128 68.0
AT5G52880 Arabidopsis thaliana HOM05D006306 ORTHO05D007912 1.3e-38 163.3 128 65.6
THA.LOC104825120 Tarenaya hassleriana HOM05D006306 ORTHO05D007912 9.3e-26 120.6 131 51.9
Aa31LG3G9120 Aethionema arabicum HOM05D006306 ORTHO05D007912 1.0e-24 117.1 123 53.7
Aa31LG3G9130 Aethionema arabicum HOM05D006306 ORTHO05D007912 1.8e-24 116.3 122 54.9
ClCG01G000830 Citrullus lanatus HOM05D006306 ORTHO05D007912 1.2e-20 103.6 142 43.0
CsaV3_5G000970 Cucumis sativus L. HOM05D006306 ORTHO05D007912 2.0e-20 102.8 144 41.7
Migut.F00264 Erythranthe guttata HOM05D006306 ORTHO05D007912 2.0e-20 102.8 138 45.7
Manes.06G154300 Manihot esculenta HOM05D006306 ORTHO05D007912 3.4e-20 102.1 144 43.8
Sc19g0001030 Simmondsia chinensis HOM05D006306 ORTHO05D007912 4.5e-20 101.7 103 51.5
MSTRG.27066 Avicennia marina HOM05D006306 ORTHO05D007912 1.7e-19 99.8 110 50.0
Sed0005488 Sechium edule HOM05D006306 ORTHO05D007912 2.2e-19 99.4 136 40.4
Ciclev10005526m.g Citrus clementina HOM05D006306 ORTHO05D007912 2.9e-19 99.0 144 42.4
Lsat_1_v5_gn_8_6341 Lactuca sativa HOM05D006306 ORTHO05D007912 2.9e-19 99.0 134 41.0
CiPaw.06G005500 Carya illinoinensis HOM05D006306 ORTHO05D007912 3.8e-19 98.6 149 43.6
Medtr1g099490 Medicago truncatula HOM05D006306 ORTHO05D007912 4.9e-19 98.2 97 52.6
Psat6g195200 Pisum sativum HOM05D006306 ORTHO05D007912 8.4e-19 97.4 134 44.0
ECA233G3199 Erigeron canadensis HOM05D006306 ORTHO05D007912 1.4e-18 96.7 110 50.0
Gohir.D12G255200 Gossypium hirsutum HOM05D006306 ORTHO05D007912 1.9e-18 96.3 101 51.5
Gorai.008G272800 Gossypium raimondii HOM05D006306 ORTHO05D007912 1.9e-18 96.3 101 51.5
Atru.chr1.326 Acer truncatum HOM05D006306 ORTHO05D007912 2.5e-18 95.9 141 44.7
AUR62021081 Chenopodium quinoa HOM05D006306 ORTHO05D007912 2.5e-18 95.9 101 51.5
Prupe.2G303600 Prunus persica HOM05D006306 ORTHO05D007912 2.5e-18 95.9 138 42.0
TWI39G0038 Tripterygium wilfordii HOM05D006306 ORTHO05D007912 2.5e-18 95.9 103 48.5
Cpa.g.sc3.9 Carica papaya HOM05D006306 ORTHO05D007912 9.3e-18 94.0 143 42.0
AUR62031450 Chenopodium quinoa HOM05D006306 ORTHO05D007912 9.3e-18 94.0 101 50.5
HanXRQChr05g0141161 Helianthus annuus HOM05D006306 ORTHO05D007912 9.3e-18 94.0 99 50.5
Sabra12G0024000 Salix brachista HOM05D006306 ORTHO05D007912 1.2e-17 93.6 136 45.6
Hund11704 Selenicereus undatus HOM05D006306 ORTHO05D007912 1.2e-17 93.6 148 39.2
DCAR_020289 Daucus carota HOM05D006306 ORTHO05D007912 2.1e-17 92.8 144 38.9
Cfa016324 Carpinus fangiana HOM05D006306 ORTHO05D007912 2.7e-17 92.4 145 40.7
Ca_10706_v3 Cicer arietinum L. HOM05D006306 ORTHO05D007912 2.7e-17 92.4 102 45.1
FvH4_7g30600 Fragaria vesca HOM05D006306 ORTHO05D007912 6.0e-17 91.3 101 50.5
FAN01G1106 Fragaria x ananassa HOM05D006306 ORTHO05D007912 6.0e-17 91.3 101 50.5
FAN06G4689 Fragaria x ananassa HOM05D006306 ORTHO05D007912 6.0e-17 91.3 101 50.5
FAN06G4805 Fragaria x ananassa HOM05D006306 ORTHO05D007912 6.0e-17 91.3 101 50.5
COL.COLO4_30262 Corchorus olitorius HOM05D006306 ORTHO05D007912 1.0e-16 90.5 102 50.0
Eucgr.K00302 Eucalyptus grandis HOM05D006306 ORTHO05D007912 1.0e-16 90.5 144 38.2
Phvul.007G076000 Phaseolus vulgaris HOM05D006306 ORTHO05D007912 1.0e-16 90.5 112 42.9
Potri.012G035500 Populus trichocarpa HOM05D006306 ORTHO05D007912 1.0e-16 90.5 136 45.6
Thecc.03G188100 Theobroma cacao HOM05D006306 ORTHO05D007912 1.0e-16 90.5 101 50.5
CANSAT21G1468 Cannabis sativa HOM05D006306 ORTHO05D007912 1.3e-16 90.1 103 46.6
Lalb_Chr02g0141321 Lupinus albus HOM05D006306 ORTHO05D007912 2.3e-16 89.4 102 47.1
Cc02_g02170 Coffea canephora HOM05D006306 ORTHO05D007912 3.9e-16 88.6 119 43.7
RcHm_v2.0_Chr1g0379281 Rosa chinensis HOM05D006306 ORTHO05D007912 6.7e-16 87.8 101 48.5
RcHm_v2.0_Chr1g0379511 Rosa chinensis HOM05D006306 ORTHO05D007912 6.7e-16 87.8 101 48.5
SalBow4G0206 Salvia bowleyana HOM05D006306 ORTHO05D007912 6.7e-16 87.8 104 49.0
Nitab4.5_0008026g0020 Nicotiana tabacum HOM05D006306 ORTHO05D007912 8.7e-16 87.4 141 41.8
unitig_92.g28262 Utricularia gibba HOM05D006306 ORTHO05D001071 8.7e-16 87.4 103 47.6
PGSC0003DMG400019962 Solanum tuberosum HOM05D006306 ORTHO05D007912 1.1e-15 87.0 141 40.4
GSVIVG01028794001 Vitis vinifera HOM05D006306 ORTHO05D007912 1.1e-15 87.0 147 38.1
FAN10G1990 Fragaria x ananassa HOM05D006306 ORTHO05D007912 1.5e-15 86.7 101 48.5
FAN10G3235 Fragaria x ananassa HOM05D006306 ORTHO05D007912 1.5e-15 86.7 101 48.5
Glyma.10G229500 Glycine max HOM05D006306 ORTHO05D007912 1.5e-15 86.7 93 49.5
QL09p012095 Quercus lobata HOM05D006306 ORTHO05D007912 1.5e-15 86.7 94 51.1
arahy.Tifrunner.gnm1.ann1.FS5X82 Arachis hypogaea HOM05D006306 ORTHO05D007912 1.9e-15 86.3 94 51.1
arahy.Tifrunner.gnm1.ann1.U1BTLB Arachis hypogaea HOM05D006306 ORTHO05D007912 2.5e-15 85.9 94 51.1
Nitab4.5_0001748g0060 Nicotiana tabacum HOM05D006306 ORTHO05D007912 2.5e-15 85.9 141 40.4
PGR142G3937 Punica granatum HOM05D006306 ORTHO05D007912 2.5e-15 85.9 103 47.6
Gohir.A12G254499 Gossypium hirsutum HOM05D006306 ORTHO05D007912 4.3e-15 85.1 124 42.7
MBI06_g33547_MAGBIO Magnolia biondii HOM05D006306 ORTHO05D007912 4.3e-15 85.1 146 37.0
Duzib084G0050 Durio zibethinus HOM05D006306 ORTHO05D007912 9.6e-15 84.0 111 45.0
Peaxi162Scf00057g00026 Petunia axillaris HOM05D006306 ORTHO05D007912 9.6e-15 84.0 96 49.0
MD01G1211200 Malus domestica HOM05D006306 ORTHO05D007912 1.3e-14 83.6 103 47.6
TAR636G3656 Trochodendron aralioides HOM05D006306 ORTHO05D007912 1.3e-14 83.6 99 46.5
Aqoxy5G04066 Aquilegia oxysepala HOM05D006306 ORTHO05D007912 1.6e-14 83.2 144 36.1
Solyc03g007750.3 Solanum lycopersicum HOM05D006306 ORTHO05D007912 1.6e-14 83.2 96 49.0
Sopen03g003670 Solanum pennellii HOM05D006306 ORTHO05D007912 2.1e-14 82.8 96 47.9
VMungo0720G2617 Vigna mungo HOM05D006306 ORTHO05D007912 2.1e-14 82.8 112 42.0
Zm00001eb293490 Zea mays HOM05D006306 ORTHO05D007912 3.7e-14 82.0 135 37.0
Hma1.2p1_0142F.1_g064400 Hydrangea macrophylla HOM05D006306 ORTHO05D007912 8.2e-14 80.9 101 48.5
Lj1A1009G47 Lonicera japonica HOM05D006306 ORTHO05D007912 8.2e-14 80.9 155 35.5
CSS0007539 Camellia sinensis var. sinensis HOM05D006306 ORTHO05D007912 1.4e-13 80.1 101 47.5
SGA_v2.0_scaffold192G40609 Striga asiatica HOM05D006306 ORTHO05D007912 1.8e-13 79.7 103 42.7
ATR1131G020 Amborella trichopoda HOM05D006306 ORTHO05D007912 2.4e-13 79.3 102 42.2
CAN.G926.4 Capsicum annuum HOM05D006306 ORTHO05D007912 2.4e-13 79.3 96 47.9
Hma1.2p1_0142F.1_g064410 Hydrangea macrophylla HOM05D006306 ORTHO05D007912 3.1e-13 79.0 99 48.5
CDE08G0346 Ceratophyllum demersum HOM05D006306 ORTHO05D007912 4.1e-13 78.6 101 40.6
ClCG04G002190 Citrullus lanatus HOM05D006306 ORTHO05D007912 6.9e-13 77.8 81 53.1
ClCG04G002620 Citrullus lanatus HOM05D006306 ORTHO05D007912 6.9e-13 77.8 81 53.1
Haze_00077 Corylus avellana HOM05D000147 ORTHO05D002016 6.9e-13 77.8 122 43.4
MBI17_g41518_MAGBIO Magnolia biondii HOM05D006306 ORTHO05D007912 1.5e-12 76.6 98 43.9
A10p10330 Brassica napus HOM05D006306 ORTHO05D007912 2.6e-12 75.9 51 84.3
TPR.G7772 Trifolium pratense HOM05D006306 ORTHO05D007912 4.5e-12 75.1 73 53.4
Lj5g0016065 Lotus japonicus HOM05D006306 ORTHO05D007912 2.9e-11 72.4 107 39.3
RhsimUnG0097700 Rhododendron simsii HOM05D006306 ORTHO05D007912 3.8e-11 72.0 93 44.1
PSO170G4684 Papaver somniferum HOM05D006306 ORTHO05D007912 5.0e-11 71.6 104 38.5
PSO063G5557 Papaver somniferum HOM05D006306 ORTHO05D007912 6.5e-11 71.2 104 38.5
Rhsim03G0195700 Rhododendron simsii HOM05D006306 ORTHO05D007912 2.5e-10 69.3 93 44.1
Sp6g15040 Schrenkiella parvula HOM05D006306 ORTHO05D007912 9.3e-10 67.4 117 37.6
AagrBONN_evm.TU.Sc2ySwM_228.2460 Anthoceros agrestis HOM05D006306 ORTHO05D007912 3.5e-09 65.5 98 38.8
HPP92_009775 Vanilla planifolia HOM05D006306 ORTHO05D007912 3.5e-09 65.5 145 31.7
AagrBONN_evm.TU.Sc2ySwM_117.3502 Anthoceros agrestis HOM05D006306 ORTHO05D007912 1.3e-08 63.5 98 38.8
vmacro06599 Vaccinium macrocarpon HOM05D006306 ORTHO05D007912 2.5e-07 59.3 118 38.1
Pp3c4_17520 Physcomitrium patens HOM05D006306 ORTHO05D007912 7.4e-07 57.8 124 35.5
RcHm_v2.0_Chr1g0379501 Rosa chinensis HOM05D006306 ORTHO05D007912 1.6e-06 56.6 97 38.1
Os05g0526300 Oryza sativa ssp. japonica HOM05D006306 ORTHO05D007912 4.8e-06 55.1 79 43.0
CAN.G926.5 Capsicum annuum HOM05D006306 ORTHO05D007912 6.3e-06 54.7 100 28.0
MELO3C034012.2 Cucumis melo HOM05D006306 ORTHO05D007912 6.3e-06 54.7 81 38.3


User provided reference genes

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