Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p42340 Brassica napus HOM05D000607 ORTHO05D010164 7.9e-55 216.9 108 100.0
BolC9t57113H Brassica oleracea HOM05D000607 ORTHO05D010164 7.9e-55 216.9 108 100.0
BcaC04g20541 Brassica carinata HOM05D000607 ORTHO05D010164 5.1e-38 161.0 80 100.0
A02p11650 Brassica napus HOM05D000607 ORTHO05D010164 5.5e-24 114.4 99 63.6
BraA02t06228Z Brassica rapa HOM05D000607 ORTHO05D010164 1.6e-23 112.8 99 62.6
A02p11640 Brassica napus HOM05D000607 ORTHO05D010164 6.7e-22 107.5 100 58.0
BcaB05g21974 Brassica carinata HOM05D000607 ORTHO05D010164 8.8e-22 107.1 99 58.6
C02p19460 Brassica napus HOM05D000607 ORTHO05D010164 1.3e-20 103.2 99 58.6
BolC2t08080H Brassica oleracea HOM05D000607 ORTHO05D010164 1.3e-20 103.2 99 58.6
BcaC03g14510 Brassica carinata HOM05D000607 ORTHO05D010164 2.2e-20 102.4 99 56.6
Sp6g14880 Schrenkiella parvula HOM05D000607 ORTHO05D010164 4.8e-20 101.3 83 60.2
Sp6g14870 Schrenkiella parvula HOM05D000607 ORTHO05D010164 8.2e-20 100.5 101 54.5
C02p19470 Brassica napus HOM05D000607 ORTHO05D010164 1.1e-19 100.1 99 55.6
BcaC03g14511 Brassica carinata HOM05D000607 ORTHO05D010164 6.9e-19 97.4 99 54.5
BcaB01g00906 Brassica carinata HOM05D000607 ORTHO05D010164 1.2e-18 96.7 99 54.5
CARHR265680 Cardamine hirsuta HOM05D000607 ORTHO05D010164 2.0e-18 95.9 99 58.6
Sp6g14900 Schrenkiella parvula HOM05D000607 ORTHO05D010164 2.0e-18 95.9 101 55.4
Aa31LG3G8990 Aethionema arabicum HOM05D000607 ORTHO05D010164 2.6e-18 95.5 101 54.5
BolC2t08079H Brassica oleracea HOM05D000607 ORTHO05D010164 3.4e-18 95.1 109 52.3
BcaB01g04211 Brassica carinata HOM05D000607 ORTHO05D010164 1.7e-17 92.8 102 56.9
BcaC03g14502 Brassica carinata HOM05D000607 ORTHO05D010164 1.7e-17 92.8 79 63.3
AL8G27190 Arabidopsis lyrata HOM05D000607 ORTHO05D010164 2.2e-17 92.4 84 61.9
Aa31LG3G9000 Aethionema arabicum HOM05D000607 ORTHO05D010164 3.8e-17 91.7 81 60.5
A03p15560 Brassica napus HOM05D000607 ORTHO05D010164 3.8e-17 91.7 100 55.0
BraA03t10848Z Brassica rapa HOM05D000607 ORTHO05D010164 3.8e-17 91.7 100 55.0
A02p11630 Brassica napus HOM05D000607 ORTHO05D010164 8.5e-17 90.5 79 62.0
C03p18190 Brassica napus HOM05D000607 ORTHO05D010164 8.5e-17 90.5 84 61.9
BolC3t14220H Brassica oleracea HOM05D000607 ORTHO05D010164 8.5e-17 90.5 84 61.9
C03p18170 Brassica napus HOM05D000607 ORTHO05D010164 1.1e-16 90.1 84 60.7
BolC3t14218H Brassica oleracea HOM05D000607 ORTHO05D010164 1.1e-16 90.1 84 60.7
BcaC03g14506 Brassica carinata HOM05D000607 ORTHO05D010164 1.4e-16 89.7 81 59.3
BraA02t06224Z Brassica rapa HOM05D000607 ORTHO05D010164 2.7e-15 85.5 72 63.9
Sp6g09500 Schrenkiella parvula HOM05D000607 ORTHO05D010164 2.7e-15 85.5 99 48.5
BolC2t08077H Brassica oleracea HOM05D000607 ORTHO05D010164 3.6e-15 85.1 99 51.5
C02p19420 Brassica napus HOM05D000607 ORTHO05D010164 1.0e-14 83.6 83 56.6
BcaC03g14503 Brassica carinata HOM05D000607 ORTHO05D010164 1.4e-14 83.2 83 55.4
BcaB05g21973 Brassica carinata HOM05D000607 ORTHO05D010164 3.0e-14 82.0 70 60.0
AT5G52760 Arabidopsis thaliana HOM05D000607 ORTHO05D010164 3.9e-14 81.6 77 57.1
BcaB08g35624 Brassica carinata HOM05D000607 ORTHO05D010164 3.9e-14 81.6 88 51.1
A10p10240 Brassica napus HOM05D000607 ORTHO05D010164 3.9e-14 81.6 104 48.1
BraA10t43103Z Brassica rapa HOM05D000607 ORTHO05D010164 3.9e-14 81.6 104 48.1
C02p19400 Brassica napus HOM05D000607 ORTHO05D010164 6.7e-14 80.9 79 58.2
BraA10t43102Z Brassica rapa HOM05D000607 ORTHO05D010164 8.8e-14 80.5 104 47.1
BcaC04g20551 Brassica carinata HOM05D000607 ORTHO05D010164 2.0e-13 79.3 88 50.0
A10p10250 Brassica napus HOM05D000607 ORTHO05D010164 2.0e-13 79.3 88 50.0
C09p42230 Brassica napus HOM05D000607 ORTHO05D010164 2.0e-13 79.3 88 50.0
BolC9t57104H Brassica oleracea HOM05D000607 ORTHO05D010164 2.0e-13 79.3 88 50.0
Aa31LG3G9010 Aethionema arabicum HOM05D000607 ORTHO05D010164 3.3e-13 78.6 106 43.4
BcaB05g21977 Brassica carinata HOM05D000607 ORTHO05D010164 4.4e-13 78.2 92 52.2
BcaC04g20552 Brassica carinata HOM05D000607 ORTHO05D010164 5.7e-13 77.8 88 50.0
C09p42220 Brassica napus HOM05D000607 ORTHO05D010164 5.7e-13 77.8 88 50.0
BolC9t57103H Brassica oleracea HOM05D000607 ORTHO05D010164 5.7e-13 77.8 88 50.0
Aa31LG3G8040 Aethionema arabicum HOM05D000607 ORTHO05D010164 1.3e-12 76.6 99 46.5
BcaC01g06197 Brassica carinata HOM05D000607 ORTHO05D010164 3.7e-12 75.1 73 61.6
BcaC01g06201 Brassica carinata HOM05D000607 ORTHO05D010164 3.7e-12 75.1 73 61.6
Aa31LG3G8050 Aethionema arabicum HOM05D000607 ORTHO05D010164 8.2e-12 73.9 99 44.4
Carub.0008s1293 Capsella rubella HOM05D000607 ORTHO05D010164 2.0e-10 69.3 73 53.4
Aa31LG3G8030 Aethionema arabicum HOM05D000607 ORTHO05D010164 2.6e-10 68.9 99 44.4
Aa31LG3G8020 Aethionema arabicum HOM05D000607 ORTHO05D010164 4.5e-10 68.2 78 53.8
AL8G27180 Arabidopsis lyrata HOM05D000607 ORTHO05D010164 1.3e-09 66.6 90 46.7
Thhalv10014994m.g Eutrema salsugineum HOM05D000607 ORTHO05D010164 1.7e-09 66.2 99 43.4
CARHR265690 Cardamine hirsuta HOM05D000607 ORTHO05D010164 3.8e-09 65.1 43 76.7
CARHR265700 Cardamine hirsuta HOM05D000607 ORTHO05D010164 6.5e-09 64.3 97 45.4
CARHR265710 Cardamine hirsuta HOM05D000607 ORTHO05D010164 1.1e-08 63.5 88 46.6
BraA10t43104Z Brassica rapa HOM05D000607 ORTHO05D010164 2.5e-08 62.4 41 75.6
Carub.0008s1291 Capsella rubella HOM05D000607 ORTHO05D010164 2.5e-08 62.4 81 45.7
Carub.0008s1292 Capsella rubella HOM05D000607 ORTHO05D010164 2.5e-08 62.4 81 46.9
AT5G52770 Arabidopsis thaliana HOM05D000607 ORTHO05D010164 4.2e-08 61.6 101 42.6
THA.LOC104825116 Tarenaya hassleriana HOM05D000607 ORTHO05D010164 7.2e-08 60.8 100 38.0
AT5G52750 Arabidopsis thaliana HOM05D000607 ORTHO05D010164 1.6e-07 59.7 90 43.3
Sp6g14910 Schrenkiella parvula HOM05D000607 ORTHO05D010164 3.6e-07 58.5 73 46.6
Carub.0008s1289 Capsella rubella HOM05D000607 ORTHO05D010164 4.7e-07 58.2 84 44.0
AL8G27200 Arabidopsis lyrata HOM05D000607 ORTHO05D010164 1.0e-06 57.0 54 57.4
Potri.017G147400 Populus trichocarpa HOM05D000607 ORTHO05D000518 3.0e-06 55.5 84 44.0
PSO478G2661 Papaver somniferum HOM05D000607 ORTHO05D000518 6.7e-06 54.3 83 42.2
PSO478G4469 Papaver somniferum HOM05D000607 ORTHO05D000518 6.7e-06 54.3 83 42.2
PSO782G0004 Papaver somniferum HOM05D000607 ORTHO05D000518 6.7e-06 54.3 70 50.0
PSO782G1566 Papaver somniferum HOM05D000607 ORTHO05D000518 6.7e-06 54.3 70 50.0
PSO782G1585 Papaver somniferum HOM05D000607 ORTHO05D000518 6.7e-06 54.3 70 50.0
PSO782G4468 Papaver somniferum HOM05D000607 ORTHO05D000518 6.7e-06 54.3 70 50.0
PSO782G4991 Papaver somniferum HOM05D000607 ORTHO05D000518 6.7e-06 54.3 70 50.0
PSO782G5097 Papaver somniferum HOM05D000607 ORTHO05D000518 6.7e-06 54.3 70 50.0
Atru.ctg97_1.34 Acer truncatum HOM05D000607 ORTHO05D000518 8.8e-06 53.9 66 48.5
CANSAT26G0001 Cannabis sativa HOM05D000607 ORTHO05D000518 8.8e-06 53.9 66 45.5


User provided reference genes

Program Settings