Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20543 Brassica carinata HOM05D008414 ORTHO05D014108 1.0e-80 303.5 173 99.4
C09p42300 Brassica napus HOM05D008414 ORTHO05D014108 1.0e-80 303.5 173 100.0
C02p39460 Brassica napus HOM05D008414 ORTHO05D014108 1.7e-72 276.2 167 94.0
BcaC06g35525 Brassica carinata HOM05D008414 ORTHO05D014108 7.6e-68 260.8 173 88.4
BcaC06g35065 Brassica carinata HOM05D008414 ORTHO05D014108 9.9e-68 260.4 173 87.3
C07p13930 Brassica napus HOM05D008414 ORTHO05D014108 9.3e-66 253.8 173 86.7
BcaB02g10766 Brassica carinata HOM05D008414 ORTHO05D014108 7.6e-60 234.2 160 87.5
BolC3t18883H Brassica oleracea HOM05D008414 ORTHO05D039896 3.5e-49 198.7 170 68.8
BolC7t40818H Brassica oleracea HOM05D008414 ORTHO05D032445 1.5e-44 183.3 171 60.2
C07p04240 Brassica napus HOM05D008414 ORTHO05D032445 7.2e-42 174.5 171 57.9
C09p45510 Brassica napus HOM05D008414 ORTHO05D032461 7.7e-36 154.5 129 63.6
BcaC01g02360 Brassica carinata HOM05D008414 ORTHO05D039896 2.9e-35 152.5 139 67.6
BcaC04g20282 Brassica carinata HOM05D008414 ORTHO05D032461 2.5e-34 149.4 129 61.2
BolC9t57420H Brassica oleracea HOM05D008414 ORTHO05D032461 3.6e-33 145.6 129 61.2
BolC9t57108H Brassica oleracea HOM05D008414 ORTHO05D033115 1.8e-32 143.3 173 52.6
BcaB03g16624 Brassica carinata HOM05D008414 ORTHO05D095320 9.7e-31 137.5 168 56.5
BolC3t19181H Brassica oleracea HOM05D008414 ORTHO05D008559 3.7e-30 135.6 154 54.5
BcaC06g36431 Brassica carinata HOM05D008414 ORTHO05D032445 1.8e-29 133.3 140 56.4
C03p69240 Brassica napus HOM05D008414 ORTHO05D008559 2.4e-29 132.9 154 55.2
C07p06230 Brassica napus HOM05D008414 ORTHO05D014108 1.5e-28 130.2 173 49.1
C07p05320 Brassica napus HOM05D008414 ORTHO05D033195 2.0e-28 129.8 173 49.7
BolC7t40932H Brassica oleracea HOM05D008414 ORTHO05D033195 2.0e-28 129.8 173 49.7
C03p66100 Brassica napus HOM05D008414 ORTHO05D003542 1.7e-27 126.7 116 66.4
BraA01t02473Z Brassica rapa HOM05D008414 ORTHO05D022023 2.9e-27 125.9 182 42.9
BcaC06g35619 Brassica carinata HOM05D008414 ORTHO05D032311 8.5e-27 124.4 108 58.3
C07p12910 Brassica napus HOM05D008414 ORTHO05D032311 8.5e-27 124.4 108 58.3
BolC7t41775H Brassica oleracea HOM05D008414 ORTHO05D032311 8.5e-27 124.4 108 58.3
BolC2t09959H Brassica oleracea HOM05D008414 ORTHO05D033195 4.2e-26 122.1 167 47.9
C01p38760 Brassica napus HOM05D008414 ORTHO05D033115 4.7e-25 118.6 165 47.3
BolC1t03833H Brassica oleracea HOM05D008414 ORTHO05D033115 4.7e-25 118.6 165 47.3
BolC4t23821H Brassica oleracea HOM05D008414 ORTHO05D014108 6.1e-25 118.2 171 45.6
BcaB02g11314 Brassica carinata HOM05D008414 ORTHO05D094225 6.7e-24 114.8 171 52.0
BcaB06g27204 Brassica carinata HOM05D001498 ORTHO05D008559 2.0e-23 113.2 173 45.7
BcaC06g36228 Brassica carinata HOM05D001498 ORTHO05D008559 9.7e-23 110.9 77 72.7
BcaB03g16772 Brassica carinata HOM05D008414 ORTHO05D014108 2.8e-22 109.4 112 57.1
BolC7t41040H Brassica oleracea HOM05D008414 ORTHO05D014108 3.7e-22 109.0 77 71.4
BcaB07g33316 Brassica carinata HOM05D008414 ORTHO05D092176 7.7e-20 101.3 171 48.5
BcaB05g23245 Brassica carinata HOM05D008414 ORTHO05D095473 2.9e-19 99.4 171 48.5
C04p09830 Brassica napus HOM05D008414 ORTHO05D014108 1.1e-18 97.4 113 49.6
BcaB06g27026 Brassica carinata HOM05D008414 ORTHO05D090558 1.5e-18 97.1 108 50.0
BcaC09g48601 Brassica carinata HOM05D001498 ORTHO05D008559 7.2e-18 94.7 181 40.9
BcaC09g48840 Brassica carinata HOM05D001498 ORTHO05D008559 9.4e-18 94.4 168 42.9
C05p45420 Brassica napus HOM05D008414 ORTHO05D022023 1.6e-17 93.6 151 42.4
BcaB06g26481 Brassica carinata HOM05D008414 ORTHO05D094346 3.6e-17 92.4 171 45.6
A08p08860 Brassica napus HOM05D008414 ORTHO05D022023 6.1e-17 91.7 151 41.1
BcaB06g26479 Brassica carinata HOM05D008414 ORTHO05D014108 1.8e-16 90.1 80 55.0
C07p06910 Brassica napus HOM05D008414 ORTHO05D022023 3.0e-16 89.4 151 43.7
BcaB05g23794 Brassica carinata HOM05D001498 ORTHO05D008559 5.2e-16 88.6 119 46.2
BcaB03g16287 Brassica carinata HOM05D008414 ORTHO05D094276 8.8e-16 87.8 73 57.5
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 1.2e-15 87.4 154 38.3
BcaB06g26761 Brassica carinata HOM05D008414 ORTHO05D091670 1.5e-15 87.0 162 37.7
BcaB07g33218 Brassica carinata HOM05D008414 ORTHO05D014108 2.6e-15 86.3 73 56.2
A10p08830 Brassica napus HOM05D001379 ORTHO05D001277 3.4e-15 85.9 148 39.9
BcaC01g02039 Brassica carinata HOM05D008414 ORTHO05D008559 2.8e-14 82.8 123 51.2
BcaB04g18489 Brassica carinata HOM05D008414 ORTHO05D092295 6.3e-14 81.6 253 29.2
BcaC06g35693 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-13 80.9 71 53.5
C01p34340 Brassica napus HOM05D008414 ORTHO05D040375 1.4e-13 80.5 140 41.4
BolC1t03404H Brassica oleracea HOM05D008414 ORTHO05D040375 1.4e-13 80.5 140 41.4
BraSC37t46119Z Brassica rapa HOM05D008414 ORTHO05D022023 1.4e-13 80.5 138 36.2
BcaC04g19842 Brassica carinata HOM05D001498 ORTHO05D008559 3.0e-08 62.8 31 90.3
BcaNung05285 Brassica carinata HOM05D008414 ORTHO05D014108 2.2e-06 56.6 42 61.9
BcaB01g01255 Brassica carinata HOM05D008414 ORTHO05D092194 6.3e-06 55.1 99 43.4
BcaB06g27015 Brassica carinata HOM05D015118 ORTHO05D091520 6.3e-06 55.1 65 43.1


User provided reference genes

Program Settings