Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 1.6e-77 292.7 149 100.0
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 1.3e-76 289.7 149 99.3
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 1.7e-60 236.1 126 94.4
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 1.7e-60 236.1 120 99.2
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 1.1e-59 233.4 126 92.9
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 7.0e-54 214.2 116 93.1
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 6.0e-53 211.1 116 91.4
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 1.7e-52 209.5 115 90.4
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 7.5e-48 194.1 116 83.6
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 7.5e-48 194.1 126 81.0
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 1.3e-47 193.4 116 86.2
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 1.3e-47 193.4 116 86.2
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 6.4e-47 191.0 117 81.2
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 1.6e-45 186.4 116 81.9
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 6.0e-37 157.9 118 72.9
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 3.9e-36 155.2 119 65.5
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 6.6e-36 154.5 121 68.6
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 1.9e-35 152.9 119 68.9
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 2.5e-35 152.5 122 65.6
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 3.3e-35 152.1 127 63.0
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 3.3e-35 152.1 120 63.3
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 4.3e-35 151.8 121 64.5
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 4.3e-35 151.8 121 63.6
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 4.3e-35 151.8 120 65.0
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 9.5e-35 150.6 121 62.0
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 2.1e-34 149.4 119 63.9
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 3.6e-34 148.7 117 66.7
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 3.6e-34 148.7 117 66.7
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 3.6e-34 148.7 127 63.0
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 6.2e-34 147.9 118 64.4
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 6.2e-34 147.9 119 64.7
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 6.2e-34 147.9 120 66.7
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 1.1e-33 147.1 119 64.7
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 1.1e-33 147.1 120 66.7
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.4e-33 146.7 118 61.9
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 1.8e-33 146.4 119 64.7
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 1.8e-33 146.4 120 65.8
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 1.8e-33 146.4 115 66.1
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 1.8e-33 146.4 122 62.3
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 1.8e-33 146.4 117 65.8
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 2.4e-33 146.0 115 67.8
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 3.1e-33 145.6 119 63.0
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 4.0e-33 145.2 126 61.1
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 4.0e-33 145.2 119 61.3
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 5.2e-33 144.8 115 65.2
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 5.2e-33 144.8 119 61.3
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 6.8e-33 144.4 120 65.8
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 8.9e-33 144.1 120 66.7
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 1.2e-32 143.7 121 62.8
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 1.2e-32 143.7 115 66.1
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 1.2e-32 143.7 115 67.0
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.5e-32 143.3 123 63.4
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 1.5e-32 143.3 120 66.7
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 2.6e-32 142.5 120 65.0
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 2.6e-32 142.5 121 63.6
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 2.6e-32 142.5 133 58.6
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 2.6e-32 142.5 115 63.5
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.6e-32 142.5 115 63.5
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.6e-32 142.5 115 63.5
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 2.6e-32 142.5 123 60.2
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 2.6e-32 142.5 120 64.2
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 2.6e-32 142.5 128 63.3
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 2.6e-32 142.5 117 65.8
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 3.4e-32 142.1 129 58.9
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 3.4e-32 142.1 121 63.6
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 3.4e-32 142.1 132 59.8
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.4e-32 141.7 115 63.5
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 4.4e-32 141.7 117 60.7
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 7.6e-32 141.0 128 58.6
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.6e-32 141.0 115 62.6
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 9.9e-32 140.6 121 61.2
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 1.3e-31 140.2 121 59.5
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 1.3e-31 140.2 119 60.5
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 1.3e-31 140.2 115 63.5
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 1.7e-31 139.8 115 63.5
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 1.7e-31 139.8 121 62.8
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 2.2e-31 139.4 114 65.8
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 2.9e-31 139.0 121 61.2
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 6.4e-31 137.9 126 58.7
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 6.4e-31 137.9 116 62.9
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 8.4e-31 137.5 115 63.5
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 8.4e-31 137.5 134 56.7
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 8.4e-31 137.5 129 55.8
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 8.4e-31 137.5 117 60.7
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.1e-30 137.1 142 52.8
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 1.1e-30 137.1 124 55.6
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.1e-30 137.1 115 63.5
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 1.1e-30 137.1 119 61.3
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.9e-30 136.3 119 61.3
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 3.2e-30 135.6 124 59.7
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 3.2e-30 135.6 123 60.2
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 3.2e-30 135.6 115 60.9
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 3.2e-30 135.6 116 62.1
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 4.1e-30 135.2 123 58.5
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 4.1e-30 135.2 130 56.2
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 5.4e-30 134.8 125 56.8
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 7.1e-30 134.4 119 59.7
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 3.5e-29 132.1 121 57.0
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.3e-28 130.2 115 61.7
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 3.0e-28 129.0 119 57.1
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 8.7e-28 127.5 159 45.3
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 1.3e-23 113.6 121 51.2
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 1.9e-22 109.8 87 67.8
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 2.4e-22 109.4 119 50.4
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 9.3e-22 107.5 127 51.2
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 5.1e-20 101.7 121 46.3
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 5.6e-19 98.2 129 47.3
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 4.8e-18 95.1 72 61.1
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 3.4e-16 89.0 64 71.9
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 2.9e-15 85.9 121 39.7
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 7.1e-14 81.3 115 40.0
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 8.7e-12 74.3 58 63.8
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 5.6e-11 71.6 58 56.9
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 6.2e-10 68.2 79 50.6
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 1.7e-07 60.1 108 34.3


User provided reference genes

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