Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 2.7e-49 198.4 101 100.0
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 1.1e-42 176.4 101 93.1
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 1.3e-38 162.9 93 92.5
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 5.0e-35 151.0 93 87.1
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 5.0e-35 151.0 93 87.1
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 8.4e-35 150.2 94 86.2
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 2.5e-34 148.7 93 86.0
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 3.5e-33 144.8 93 81.7
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 6.1e-33 144.1 93 82.8
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 1.0e-32 143.3 100 79.0
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 5.1e-32 141.0 93 80.6
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 7.4e-31 137.1 93 77.4
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 3.7e-30 134.8 136 60.3
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 5.3e-29 131.0 93 74.2
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 3.8e-27 124.8 93 73.1
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 5.0e-27 124.4 93 72.0
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 5.0e-27 124.4 94 68.1
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 5.0e-27 124.4 93 72.0
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 6.5e-27 124.0 93 71.0
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 6.5e-27 124.0 94 70.2
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 6.5e-27 124.0 93 69.9
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 1.1e-26 123.2 93 71.0
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 1.4e-26 122.9 93 69.9
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 1.9e-26 122.5 94 68.1
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 1.9e-26 122.5 93 69.9
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.5e-26 122.1 93 72.0
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 2.5e-26 122.1 93 71.0
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 2.5e-26 122.1 93 72.0
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 3.2e-26 121.7 97 68.0
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 3.2e-26 121.7 93 68.8
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 3.2e-26 121.7 93 68.8
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 7.2e-26 120.6 93 68.8
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 7.2e-26 120.6 94 69.1
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 9.4e-26 120.2 93 69.9
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 9.4e-26 120.2 93 69.9
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 9.4e-26 120.2 93 69.9
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 9.4e-26 120.2 93 67.7
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 9.4e-26 120.2 93 68.8
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 9.4e-26 120.2 98 66.3
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 1.2e-25 119.8 99 66.7
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.6e-25 119.4 93 69.9
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 1.6e-25 119.4 93 68.8
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 2.1e-25 119.0 93 69.9
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 2.1e-25 119.0 93 68.8
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 2.7e-25 118.6 93 68.8
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 2.7e-25 118.6 93 68.8
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 2.7e-25 118.6 93 68.8
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 2.7e-25 118.6 93 68.8
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 3.6e-25 118.2 93 66.7
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 4.6e-25 117.9 93 68.8
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 4.6e-25 117.9 93 67.7
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 4.6e-25 117.9 93 68.8
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 4.6e-25 117.9 93 67.7
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 6.1e-25 117.5 93 65.6
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.0e-24 116.7 93 66.7
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 1.0e-24 116.7 93 66.7
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 1.0e-24 116.7 93 66.7
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 1.4e-24 116.3 93 66.7
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 1.8e-24 115.9 93 66.7
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 2.3e-24 115.5 93 66.7
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 2.3e-24 115.5 93 65.6
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 3.0e-24 115.2 92 67.4
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 3.0e-24 115.2 93 66.7
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 3.0e-24 115.2 93 66.7
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 3.0e-24 115.2 95 66.3
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 3.0e-24 115.2 93 66.7
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 3.9e-24 114.8 93 64.5
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 6.7e-24 114.0 93 65.6
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 6.7e-24 114.0 93 66.7
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 1.5e-23 112.8 93 64.5
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.5e-23 112.8 93 64.5
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 2.5e-23 112.1 93 65.6
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 2.5e-23 112.1 93 65.6
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 3.3e-23 111.7 93 65.6
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 3.3e-23 111.7 93 63.4
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 5.7e-23 110.9 93 64.5
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 5.7e-23 110.9 93 63.4
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 5.7e-23 110.9 93 62.4
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 5.7e-23 110.9 93 62.4
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 7.4e-23 110.5 93 63.4
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 9.7e-23 110.2 58 96.6
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 1.3e-22 109.8 93 63.4
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 1.3e-22 109.8 93 64.5
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 1.7e-22 109.4 93 61.3
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 2.2e-22 109.0 93 61.3
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 3.7e-22 108.2 93 61.3
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 4.8e-22 107.8 93 60.2
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 4.8e-22 107.8 93 61.3
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 6.3e-22 107.5 93 61.3
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 6.3e-22 107.5 93 62.4
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 2.4e-21 105.5 93 60.2
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 3.1e-21 105.1 92 59.8
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 3.1e-21 105.1 85 67.1
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 9.1e-21 103.6 92 59.8
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 9.1e-21 103.6 95 62.1
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 9.1e-21 103.6 93 59.1
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 9.1e-21 103.6 77 71.4
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 7.7e-20 100.5 58 86.2
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.0e-19 100.1 93 59.1
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.3e-19 99.8 93 57.0
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 1.3e-19 99.8 93 57.0
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 1.4e-18 96.3 63 79.4
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 9.4e-18 93.6 92 53.3
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 1.0e-16 90.1 58 74.1
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.8e-16 89.4 85 56.5
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 6.7e-16 87.4 73 64.4
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 1.5e-15 86.3 68 69.1
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 1.5e-15 86.3 148 41.2
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 4.4e-15 84.7 92 48.9
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 2.2e-14 82.4 58 69.0
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 2.2e-14 82.4 93 47.3
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 4.8e-14 81.3 67 67.2
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 8.2e-14 80.5 68 61.8
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 5.0e-11 71.2 68 54.4
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 8.5e-11 70.5 84 44.0
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 3.2e-10 68.6 58 56.9
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 4.0e-08 61.6 36 77.8
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 1.3e-06 56.6 32 84.4


User provided reference genes

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