Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p39220 Brassica napus HOM05D053061 ORTHO05D041243 1.3e-94 349.7 178 100.0
BolC9t56800H Brassica oleracea HOM05D053061 ORTHO05D041243 1.3e-94 349.7 178 100.0
BolC1t00566H Brassica oleracea HOM05D028146 ORTHO05D027514 9.4e-13 77.8 41 85.4
BcaB07g31267 Brassica carinata HOM05D000421 ORTHO05D001007 8.2e-09 64.7 65 58.5
BcaNung06889 Brassica carinata HOM05D000421 ORTHO05D001007 2.4e-08 63.2 65 56.9
A01p30100 Brassica napus HOM05D000421 ORTHO05D001007 2.4e-08 63.2 65 56.9
C01p38160 Brassica napus HOM05D000421 ORTHO05D001007 2.4e-08 63.2 65 56.9
BolC1t03778H Brassica oleracea HOM05D000421 ORTHO05D001007 2.4e-08 63.2 65 56.9
BraA01t03141Z Brassica rapa HOM05D000421 ORTHO05D001007 2.4e-08 63.2 65 56.9
A09p16840 Brassica napus HOM05D000421 ORTHO05D001007 3.1e-08 62.8 65 56.9
BraA09t37321Z Brassica rapa HOM05D000421 ORTHO05D001007 3.1e-08 62.8 65 56.9
BcaC04g22315 Brassica carinata HOM05D000421 ORTHO05D001007 4.1e-08 62.4 65 56.9
C09p20780 Brassica napus HOM05D000421 ORTHO05D001007 4.1e-08 62.4 65 56.9
BolC9t54973H Brassica oleracea HOM05D000421 ORTHO05D001007 4.1e-08 62.4 65 56.9
A02p01790 Brassica napus HOM05D028146 ORTHO05D027514 7.0e-08 61.6 35 77.1
C06p03800 Brassica napus HOM05D028146 ORTHO05D027514 7.0e-08 61.6 35 77.1
Sp2g03240 Schrenkiella parvula HOM05D000421 ORTHO05D001007 9.1e-08 61.2 65 55.4
C05p25490 Brassica napus HOM05D003986 ORTHO05D004916 1.2e-07 60.8 46 69.6
Thhalv10023474m.g Eutrema salsugineum HOM05D000421 ORTHO05D001007 1.6e-07 60.5 65 53.8
AL2G15090 Arabidopsis lyrata HOM05D000421 ORTHO05D001007 3.5e-07 59.3 65 53.8
AT1G61240 Arabidopsis thaliana HOM05D000421 ORTHO05D001007 3.5e-07 59.3 65 53.8
Carub.0002s0392 Capsella rubella HOM05D000421 ORTHO05D001007 3.5e-07 59.3 65 53.8
BcaC04g20787 Brassica carinata HOM05D021106 ORTHO05D021791 4.5e-07 58.9 28 100.0
BcaC04g20788 Brassica carinata HOM05D021106 ORTHO05D021791 4.5e-07 58.9 28 100.0
BcaB03g12046 Brassica carinata HOM05D003986 ORTHO05D004916 5.9e-07 58.5 31 87.1
BolC3t19622H Brassica oleracea HOM05D003986 ORTHO05D004916 1.0e-06 57.8 31 87.1
Thhalv10006540m.g Eutrema salsugineum HOM05D003986 ORTHO05D004916 1.0e-06 57.8 31 87.1
CARHR051390 Cardamine hirsuta HOM05D000421 ORTHO05D001007 2.2e-06 56.6 65 50.8
Sp1g23110 Schrenkiella parvula HOM05D003986 ORTHO05D004916 2.9e-06 56.2 31 83.9
A05p21230 Brassica napus HOM05D021106 ORTHO05D021791 3.8e-06 55.8 28 96.4
BraA05t21031Z Brassica rapa HOM05D021106 ORTHO05D021791 3.8e-06 55.8 28 96.4
C03p73260 Brassica napus HOM05D003986 ORTHO05D004916 6.5e-06 55.1 31 80.6


User provided reference genes

Program Settings