Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p38750 Brassica napus HOM05D038769 ORTHO05D027212 4.4e-22 107.1 54 100.0
BolC9t56735H Brassica oleracea HOM05D038769 ORTHO05D027212 4.4e-22 107.1 54 100.0
BcaC04g20821 Brassica carinata HOM05D038769 ORTHO05D027212 1.4e-12 75.5 38 97.4
Carub.0002s1491 Capsella rubella HOM05D001164 ORTHO05D001031 2.3e-10 68.2 44 75.0
Sp5g23470 Schrenkiella parvula HOM05D001164 ORTHO05D001031 8.6e-10 66.2 53 67.9
BcaC03g14943 Brassica carinata HOM05D001164 ORTHO05D027212 1.5e-09 65.5 42 81.0
C02p24520 Brassica napus HOM05D001164 ORTHO05D001031 1.5e-09 65.5 42 81.0
AT1G68410 Arabidopsis thaliana HOM05D001164 ORTHO05D001031 1.9e-09 65.1 43 74.4
A02p14970 Brassica napus HOM05D001164 ORTHO05D001031 7.3e-09 63.2 42 78.6
BraA02t06564Z Brassica rapa HOM05D001164 ORTHO05D001031 7.3e-09 63.2 42 78.6
CARHR061200 Cardamine hirsuta HOM05D001164 ORTHO05D001031 1.2e-08 62.4 53 62.3
AL2G27270 Arabidopsis lyrata HOM05D001164 ORTHO05D001031 5.2e-07 57.0 45 66.7
CsaV3_5G034510 Cucumis sativus L. HOM05D001164 ORTHO05D001031 5.2e-07 57.0 53 50.9
Sed0008917 Sechium edule HOM05D001164 ORTHO05D001031 8.9e-07 56.2 50 62.0
MELO3C012267.2 Cucumis melo HOM05D001164 ORTHO05D001031 1.2e-06 55.8 53 50.9
TWI79G1027 Tripterygium wilfordii HOM05D001164 ORTHO05D001031 1.5e-06 55.5 41 68.3
Prupe.1G315600 Prunus persica HOM05D001164 ORTHO05D001031 3.4e-06 54.3 41 65.9
Sabra10G0091700 Salix brachista HOM05D001164 ORTHO05D001031 4.4e-06 53.9 41 65.9
Lj2g0018123 Lotus japonicus HOM05D001164 ORTHO05D001031 7.5e-06 53.1 55 54.5
Cpa.g.sc65.55 Carica papaya HOM05D001164 ORTHO05D001031 9.8e-06 52.8 41 65.9
Cfa015856 Carpinus fangiana HOM05D001164 ORTHO05D001031 9.8e-06 52.8 53 54.7
Haze_00640 Corylus avellana HOM05D001164 ORTHO05D001031 9.8e-06 52.8 53 54.7
QL01p040344 Quercus lobata HOM05D001164 ORTHO05D001031 9.8e-06 52.8 41 65.9


User provided reference genes

Program Settings