Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 0.0e+00 1309.3 722 100.0
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 0.0e+00 1309.3 722 100.0
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 0.0e+00 1294.3 722 99.6
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 0.0e+00 1290.8 722 97.2
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 0.0e+00 1290.8 722 96.4
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 0.0e+00 1233.4 722 92.8
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 0.0e+00 1166.8 727 87.6
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 0.0e+00 1136.3 727 85.3
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 0.0e+00 1080.5 724 82.3
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 4.1e-309 1064.3 730 81.1
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 1.6e-308 1062.4 730 81.4
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 8.1e-305 1050.0 729 80.0
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 7.9e-276 953.7 728 73.2
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 3.4e-271 938.3 724 75.3
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 2.2e-246 855.9 724 65.1
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 2.7e-244 849.0 724 65.2
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 1.0e-243 847.0 730 64.8
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 1.4e-243 846.7 725 64.6
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 1.3e-241 840.1 723 65.1
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 1.7e-241 839.7 721 64.2
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 1.8e-240 836.3 725 63.9
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 4.5e-239 831.6 721 64.9
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 5.5e-237 824.7 697 65.6
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 1.1e-234 817.0 725 64.3
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 8.2e-233 810.8 811 58.2
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 1.1e-232 810.4 723 62.7
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 2.0e-231 806.2 721 62.0
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 5.9e-231 804.7 727 62.7
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 9.4e-229 797.3 750 60.1
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 8.0e-228 794.3 729 61.6
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 5.7e-226 788.1 726 62.5
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 9.7e-226 787.3 720 61.4
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 6.3e-225 784.6 731 61.4
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 8.2e-225 784.3 725 60.3
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 1.1e-224 783.9 694 63.1
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 1.4e-224 783.5 725 62.5
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 5.3e-224 781.6 730 61.8
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 7.0e-224 781.2 729 61.0
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 2.0e-223 779.6 722 61.1
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 2.0e-223 779.6 725 60.0
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 2.7e-223 779.2 747 60.5
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 4.5e-223 778.5 731 61.6
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 1.7e-222 776.5 724 60.1
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 2.2e-222 776.2 733 60.8
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 1.6e-220 770.0 726 61.2
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 3.6e-220 768.8 722 60.1
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 6.1e-220 768.1 722 60.1
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 2.3e-219 766.1 726 59.8
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 3.0e-219 765.8 724 60.9
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 5.2e-219 765.0 732 61.3
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 2.6e-218 762.7 726 61.3
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 4.8e-217 758.4 722 60.0
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 1.8e-216 756.5 671 64.8
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 2.4e-216 756.1 724 59.7
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 3.1e-216 755.7 723 60.4
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 5.4e-216 755.0 729 59.0
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 4.5e-215 751.9 725 59.3
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 5.9e-215 751.5 734 59.0
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 5.0e-214 748.4 721 59.1
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 1.9e-213 746.5 726 59.4
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 4.2e-213 745.3 704 59.8
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 2.1e-212 743.0 730 60.4
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 5.2e-211 738.4 720 58.9
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 2.0e-210 736.5 712 58.3
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 2.6e-210 736.1 721 58.1
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 5.7e-210 734.9 722 57.9
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 5.4e-208 728.4 794 56.2
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 4.5e-207 725.3 724 56.6
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 1.8e-203 713.4 735 56.6
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 6.8e-203 711.4 738 55.1
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 6.8e-203 711.4 810 52.5
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 5.8e-202 708.4 710 57.7
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 5.8e-202 708.4 695 58.3
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 4.3e-197 692.2 693 58.3
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 4.4e-194 682.2 730 56.8
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.7e-193 680.2 662 60.1
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 6.4e-193 678.3 743 54.2
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 5.6e-189 665.2 725 56.0
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 7.5e-186 654.8 725 53.8
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 2.2e-185 653.3 727 53.4
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 6.4e-185 651.7 672 55.7
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 3.2e-184 649.4 695 53.4
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 2.1e-183 646.7 723 54.1
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 3.3e-181 639.4 696 53.2
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 8.1e-180 634.8 724 52.6
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 2.1e-175 620.2 772 49.1
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 1.7e-166 590.5 728 48.6
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 1.2e-162 577.8 732 48.1
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 2.6e-162 576.6 672 53.1
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 2.3e-158 563.5 723 49.5
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 1.6e-148 530.8 596 54.2
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 2.9e-137 493.4 357 73.1
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 6.7e-134 482.3 575 50.3
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 8.8e-126 455.3 551 51.2
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 1.5e-125 454.5 361 68.4
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 8.8e-118 428.7 583 48.5
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 6.3e-116 422.5 426 57.3
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.4e-115 421.4 298 74.2
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 8.5e-105 385.6 265 75.5
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 5.5e-104 382.9 426 54.2
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 3.6e-87 327.0 376 53.5
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 1.2e-82 312.0 705 33.6
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 5.0e-81 306.6 343 55.4
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 3.3e-72 277.3 666 30.2
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 1.8e-70 271.6 685 31.5
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 1.5e-69 268.5 445 41.1
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 1.7e-65 255.0 374 46.5
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 3.9e-65 253.8 505 38.4
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 1.2e-61 242.3 743 27.6
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 6.4e-60 236.5 272 49.6
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 8.4e-60 236.1 706 27.6
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 2.6e-53 214.5 439 38.3
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 4.5e-29 134.0 136 55.1
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 3.9e-25 120.9 82 67.1
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.9e-24 118.6 142 49.3
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 5.9e-21 107.1 188 39.9
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 2.9e-20 104.8 502 23.5
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 3.2e-19 101.3 142 43.7
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 1.5e-16 92.4 96 52.1
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.0e-16 92.0 153 39.2
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.3e-15 89.4 55 83.6
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 4.8e-15 87.4 124 39.5
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 6.9e-14 83.6 104 51.9
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 1.5e-13 82.4 115 38.3
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 2.6e-13 81.6 252 29.4
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 1.7e-12 79.0 55 72.7
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 3.8e-12 77.8 68 57.4
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 3.9e-09 67.8 107 40.2
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 5.1e-09 67.4 68 48.5
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 8.8e-09 66.6 105 44.8
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 1.8e-06 58.9 41 70.7


User provided reference genes

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