Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20835 Brassica carinata HOM05D010948 ORTHO05D013805 5.9e-68 260.8 135 100.0
C09p38650 Brassica napus HOM05D010948 ORTHO05D013805 5.9e-68 260.8 135 100.0
BolC9t56721H Brassica oleracea HOM05D010948 ORTHO05D013805 5.9e-68 260.8 135 100.0
A03p59560 Brassica napus HOM05D010948 ORTHO05D013805 6.1e-65 250.8 134 96.3
BolC9t55422H Brassica oleracea HOM05D010948 ORTHO05D013805 1.8e-64 249.2 134 96.3
A07p28660 Brassica napus HOM05D010948 ORTHO05D013805 3.0e-64 248.4 134 95.5
A01p00100 Brassica napus HOM05D010948 ORTHO05D013805 7.5e-55 217.2 134 85.8
BcaB01g05924 Brassica carinata HOM05D010948 ORTHO05D013805 1.4e-53 213.0 133 85.0
C03p51770 Brassica napus HOM05D010948 ORTHO05D013805 2.4e-45 185.7 96 100.0
C03p25990 Brassica napus HOM05D010948 ORTHO05D013805 6.0e-36 154.5 132 66.7
BcaC01g00510 Brassica carinata HOM05D010948 ORTHO05D039443 2.6e-23 112.5 87 74.7
C03p80810 Brassica napus HOM05D010948 ORTHO05D039443 1.6e-17 93.2 51 94.1
A03p11870 Brassica napus HOM05D010948 ORTHO05D013805 2.0e-15 86.3 52 82.7
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 4.9e-14 81.6 105 49.5
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 1.1e-13 80.5 105 49.5
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 4.2e-13 78.6 105 48.6
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 3.0e-11 72.4 105 47.6
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 6.7e-11 71.2 106 47.2
C07p18370 Brassica napus HOM05D009754 ORTHO05D033217 1.3e-09 67.0 120 40.0
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 2.8e-09 65.9 107 45.8
BolC4t25298H Brassica oleracea HOM05D009754 ORTHO05D020043 3.7e-09 65.5 96 46.9
BraA02t06231Z Brassica rapa HOM05D011556 ORTHO05D014123 3.7e-09 65.5 122 39.3
BcaC04g18681 Brassica carinata HOM05D009754 ORTHO05D027209 6.2e-09 64.7 106 44.3
C08p35010 Brassica napus HOM05D009754 ORTHO05D033217 8.2e-09 64.3 107 42.1
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 1.1e-08 63.9 57 63.2
BcaC08g46504 Brassica carinata HOM05D009754 ORTHO05D027209 5.3e-08 61.6 107 42.1
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 5.3e-08 61.6 107 42.1
C02p63430 Brassica napus HOM05D014255 ORTHO05D015450 9.0e-08 60.8 102 42.2
C05p02990 Brassica napus HOM05D009754 ORTHO05D101014 9.0e-08 60.8 76 51.3
BolC2t12410H Brassica oleracea HOM05D014255 ORTHO05D015450 9.0e-08 60.8 102 42.2
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 1.2e-07 60.5 105 42.9
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 1.2e-07 60.5 64 53.1
BcaB07g31310 Brassica carinata HOM05D029219 ORTHO05D091766 1.2e-07 60.5 36 77.8
BcaC06g35412 Brassica carinata HOM05D010893 ORTHO05D016035 1.5e-07 60.1 107 43.9
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 2.0e-07 59.7 76 48.7
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 2.0e-07 59.7 76 48.7
C04p72720 Brassica napus HOM05D009754 ORTHO05D014123 2.6e-07 59.3 119 40.3
BolC2t10052H Brassica oleracea HOM05D011556 ORTHO05D014123 2.6e-07 59.3 35 77.1
BcaB07g33645 Brassica carinata HOM05D010893 ORTHO05D014123 4.5e-07 58.5 122 39.3
C03p32540 Brassica napus HOM05D014255 ORTHO05D015450 5.8e-07 58.2 102 42.2
C04p32520 Brassica napus HOM05D011556 ORTHO05D014123 7.6e-07 57.8 38 76.3
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 1.0e-06 57.4 56 57.1
A09p03830 Brassica napus HOM05D011556 ORTHO05D014123 1.3e-06 57.0 51 58.8
C07p15790 Brassica napus HOM05D011556 ORTHO05D014123 1.3e-06 57.0 101 40.6
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 4.9e-06 55.1 107 42.1
BcaC07g39633 Brassica carinata HOM05D017424 ORTHO05D039094 4.9e-06 55.1 52 61.5
BolC2t06272H Brassica oleracea HOM05D011556 ORTHO05D014123 4.9e-06 55.1 101 39.6
C06p45540 Brassica napus HOM05D017424 ORTHO05D032352 6.5e-06 54.7 54 57.4


User provided reference genes

Program Settings