Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p38520 Brassica napus HOM05D007751 ORTHO05D009813 1.8e-70 269.2 142 100.0
BolC9t56709H Brassica oleracea HOM05D007751 ORTHO05D009813 2.8e-60 235.3 123 100.0
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 2.6e-58 228.8 177 76.8
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 5.9e-58 227.6 177 76.3
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 9.1e-51 203.8 177 67.2
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 8.5e-49 197.2 177 65.0
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.9e-48 196.1 177 63.8
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.2e-47 193.4 177 62.7
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 8.8e-46 187.2 176 62.5
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 3.4e-42 175.3 177 59.9
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 4.5e-34 148.3 171 50.3
AL7G28560 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.2e-29 133.7 176 47.7
AT4G24640 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 4.4e-29 131.7 176 47.2
Thhalv10026329m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 4.4e-29 131.7 176 46.6
Carub.0007s1642 Capsella rubella HOM05D007751 ORTHO05D009813 8.2e-28 127.5 176 45.5
Sp7g22630 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.2e-26 123.6 176 44.9
BcaNung04957 Brassica carinata HOM05D007751 ORTHO05D009813 5.9e-26 121.3 176 46.0
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.3e-25 120.2 131 51.9
CARHR232030 Cardamine hirsuta HOM05D007751 ORTHO05D009813 6.5e-25 117.9 176 41.5
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.5e-24 116.7 119 55.5
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 5.5e-24 114.8 132 50.8
C01p19970 Brassica napus HOM05D007751 ORTHO05D009813 7.2e-24 114.4 176 44.9
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 9.4e-24 114.0 127 51.2
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 9.4e-24 114.0 127 53.5
A01p15990 Brassica napus HOM05D007751 ORTHO05D009813 1.2e-23 113.6 176 44.9
BraA01t01533Z Brassica rapa HOM05D007751 ORTHO05D009813 1.2e-23 113.6 176 44.9
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 2.1e-23 112.8 127 51.2
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 2.1e-23 112.8 127 51.2
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 2.1e-23 112.8 121 52.1
BcaC09g50845 Brassica carinata HOM05D007751 ORTHO05D009813 2.7e-23 112.5 176 43.8
BolC1t01925H Brassica oleracea HOM05D007751 ORTHO05D009813 2.7e-23 112.5 176 44.3
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 8.0e-23 110.9 127 50.4
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 8.0e-23 110.9 178 43.8
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.8e-22 109.8 131 51.1
AT5G50060 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 4.0e-22 108.6 119 52.1
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 5.2e-22 108.2 137 47.4
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 2.0e-21 106.3 127 50.4
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 1.7e-20 103.2 174 42.0
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.2e-20 102.8 128 52.3
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.1e-19 100.5 124 51.6
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.8e-19 99.8 124 50.0
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 4.1e-19 98.6 127 44.1
AL8G24060 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.2e-18 97.1 125 51.2
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 2.0e-18 96.3 132 47.7
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 2.0e-18 96.3 121 47.9
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 2.0e-18 96.3 132 47.7
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 2.0e-18 96.3 132 47.7
Carub.0002s0822 Capsella rubella HOM05D007751 ORTHO05D009813 2.7e-18 95.9 124 47.6
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 3.5e-18 95.5 121 47.1
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 3.5e-18 95.5 132 47.7
AT5G50070 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 4.5e-18 95.1 125 50.4
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.5e-18 95.1 120 48.3
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 7.7e-18 94.4 132 47.0
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 7.7e-18 94.4 123 48.8
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 1.3e-17 93.6 132 47.0
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.1e-16 90.5 124 44.4
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.5e-16 90.1 121 47.1
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 1.9e-16 89.7 129 45.7
Carub.0008s1002 Capsella rubella HOM05D007751 ORTHO05D009813 7.2e-16 87.8 136 45.6
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 1.2e-15 87.0 122 45.1
Aa31LG4G9710 Aethionema arabicum HOM05D007751 ORTHO05D009813 2.1e-15 86.3 124 45.2
CARHR258620 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.4e-14 83.6 97 49.5
Aa31sc47G50 Aethionema arabicum HOM05D007751 ORTHO05D009813 5.2e-14 81.6 129 40.3
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 5.2e-14 81.6 120 41.7
A08p21410 Brassica napus HOM05D007751 ORTHO05D009813 8.9e-14 80.9 71 59.2
BcaC07g38163 Brassica carinata HOM05D007751 ORTHO05D009813 2.0e-13 79.7 117 44.4
AL1G65530 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 3.4e-13 79.0 95 51.6
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 1.7e-12 76.6 127 37.8
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 6.3e-12 74.7 127 37.0
Carub.0002s0821 Capsella rubella HOM05D007751 ORTHO05D009813 1.4e-11 73.6 123 41.5
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 4.1e-11 72.0 132 39.4
BolC8t48582H Brassica oleracea HOM05D007751 ORTHO05D009813 4.1e-11 72.0 120 42.5
BolC2t08647H Brassica oleracea HOM05D007751 ORTHO05D009813 3.5e-10 68.9 94 42.6
A02p15600 Brassica napus HOM05D007751 ORTHO05D009813 6.6e-09 64.7 114 35.1
A01p20050 Brassica napus HOM05D007751 ORTHO05D009813 2.5e-08 62.8 132 31.8
BraA01t01929Z Brassica rapa HOM05D007751 ORTHO05D009813 2.5e-08 62.8 131 33.6
C02p26100 Brassica napus HOM05D007751 ORTHO05D009813 5.6e-08 61.6 116 36.2
BolC2t08679H Brassica oleracea HOM05D007751 ORTHO05D009813 5.6e-08 61.6 116 36.2
A02p15670 Brassica napus HOM05D007751 ORTHO05D009813 7.3e-08 61.2 116 36.2
BraA02t06629Z Brassica rapa HOM05D007751 ORTHO05D009813 7.3e-08 61.2 116 36.2
BcaC03g15060 Brassica carinata HOM05D007751 ORTHO05D009813 1.0e-06 57.4 97 37.1
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 6.8e-06 54.7 120 30.8
BolC4t26309H Brassica oleracea HOM05D007751 ORTHO05D009813 8.9e-06 54.3 66 48.5


User provided reference genes

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