Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 1.1e-175 619.8 299 100.0
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 1.9e-151 539.3 283 93.3
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 1.5e-116 423.3 203 100.0
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 1.5e-116 423.3 203 100.0
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 1.6e-113 413.3 203 97.0
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 2.6e-108 396.0 205 93.2
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 1.4e-93 347.1 205 83.4
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 6.1e-89 331.6 205 82.0
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 2.2e-86 323.2 205 79.5
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 3.1e-85 319.3 206 78.6
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 6.9e-85 318.2 208 76.9
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 1.3e-78 297.4 205 74.1
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 1.4e-72 277.3 201 69.7
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 3.5e-68 262.7 214 63.1
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 1.7e-67 260.4 212 62.7
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 3.8e-67 259.2 214 63.6
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 1.5e-66 257.3 211 63.5
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 4.2e-66 255.8 218 60.6
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.2e-65 254.2 218 60.1
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 1.2e-65 254.2 218 60.1
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 2.7e-65 253.1 220 60.5
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 3.6e-65 252.7 209 61.2
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 3.6e-65 252.7 162 72.8
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 4.7e-65 252.3 207 62.8
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 1.0e-64 251.1 187 66.3
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 1.4e-64 250.8 183 66.1
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 2.3e-64 250.0 221 60.6
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 4.0e-64 249.2 214 61.2
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 4.0e-64 249.2 206 62.1
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 8.8e-64 248.1 219 56.2
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 8.8e-64 248.1 216 60.2
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 1.2e-63 247.7 172 70.3
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 1.5e-63 247.3 173 69.9
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 2.0e-63 246.9 191 63.9
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 2.0e-63 246.9 191 63.9
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 3.3e-63 246.1 218 59.2
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 3.3e-63 246.1 170 70.6
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 4.4e-63 245.7 208 59.6
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 4.4e-63 245.7 186 64.0
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 7.5e-63 245.0 220 60.5
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 7.5e-63 245.0 203 63.1
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 1.3e-62 244.2 206 63.6
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 1.3e-62 244.2 213 60.6
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 1.7e-62 243.8 160 70.6
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 2.8e-62 243.0 216 58.3
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 2.8e-62 243.0 170 71.2
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 4.8e-62 242.3 197 61.4
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 4.8e-62 242.3 223 57.4
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 1.4e-61 240.7 208 59.1
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 1.4e-61 240.7 186 61.8
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 1.8e-61 240.4 162 69.8
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 2.4e-61 240.0 211 57.8
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 2.4e-61 240.0 213 56.3
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 3.1e-61 239.6 187 63.6
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 4.1e-61 239.2 185 61.1
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 5.3e-61 238.8 175 65.7
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 9.1e-61 238.0 212 58.5
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 9.1e-61 238.0 258 51.2
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 9.1e-61 238.0 209 59.3
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 9.1e-61 238.0 187 63.6
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 9.1e-61 238.0 164 68.9
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 1.2e-60 237.7 204 61.3
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.6e-60 237.3 178 65.7
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 2.0e-60 236.9 157 71.3
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 4.5e-60 235.7 216 56.9
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 7.7e-60 235.0 161 67.7
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 1.0e-59 234.6 200 60.5
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 1.0e-59 234.6 162 69.1
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 1.7e-59 233.8 182 64.3
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 2.2e-59 233.4 200 60.0
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 2.2e-59 233.4 175 63.4
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 2.9e-59 233.0 175 65.1
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 3.8e-59 232.6 178 64.0
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 3.8e-59 232.6 232 55.6
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 3.8e-59 232.6 187 61.5
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 1.1e-58 231.1 190 58.4
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 1.1e-58 231.1 213 57.7
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 2.5e-58 229.9 163 67.5
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 3.2e-58 229.6 159 68.6
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 4.2e-58 229.2 188 61.7
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 5.5e-58 228.8 174 62.6
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 7.2e-58 228.4 206 59.7
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 1.2e-57 227.6 217 57.1
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 6.1e-57 225.3 184 60.3
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 6.1e-57 225.3 174 64.9
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 6.1e-57 225.3 184 62.5
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 2.3e-56 223.4 170 61.8
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 3.0e-56 223.0 159 67.3
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 5.2e-56 222.2 188 61.2
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 2.6e-55 219.9 176 61.4
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 4.4e-55 219.2 181 58.6
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 4.4e-55 219.2 157 66.2
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 1.3e-54 217.6 128 73.4
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 6.3e-54 215.3 183 58.5
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 1.1e-53 214.5 131 71.8
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 2.4e-53 213.4 173 61.8
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 7.7e-52 208.4 145 65.5
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 3.8e-51 206.1 214 53.7
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 4.2e-50 202.6 124 73.4
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 2.1e-49 200.3 203 52.7
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 2.8e-49 199.9 144 60.4
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 1.4e-48 197.6 156 59.0
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 2.0e-47 193.7 186 55.9
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 4.5e-44 182.6 125 68.0
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 1.1e-42 177.9 126 67.5
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 1.2e-41 174.5 134 52.2
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 4.0e-40 169.5 124 65.3
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 9.8e-39 164.9 111 61.3
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 4.1e-37 159.5 92 83.7
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 3.3e-34 149.8 156 54.5
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 3.3e-34 149.8 156 54.5
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 1.2e-33 147.9 147 47.6
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 1.6e-33 147.5 122 53.3
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 5.8e-31 139.0 128 45.3
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 8.3e-30 135.2 141 54.6
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 3.5e-28 129.8 81 74.1
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 1.1e-26 124.8 140 51.4
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 2.5e-26 123.6 81 70.4
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 1.2e-25 121.3 100 61.0
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 6.2e-25 119.0 137 49.6
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 1.5e-23 114.4 154 46.8
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 3.0e-19 100.1 114 36.8
PRCOL_00004884 Prasinoderma coloniale HOM05D006272 ORTHO05D030206 1.6e-09 67.8 149 31.5
TPR.G22672 Trifolium pratense HOM05D006272 ORTHO05D007989 2.1e-09 67.4 39 74.4


User provided reference genes

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