Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 7.8e-153 544.3 391 100.0
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 7.9e-121 438.0 330 100.0
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 4.6e-89 332.4 307 73.6
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 2.0e-79 300.4 252 72.6
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-78 297.7 252 71.0
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 1.8e-72 277.3 278 69.4
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 2.4e-69 266.9 263 71.5
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 3.1e-69 266.5 286 61.5
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 3.5e-68 263.1 246 69.1
BcaC07g37515 Brassica carinata HOM05D004128 ORTHO05D008395 2.2e-67 260.4 242 70.2
BcaC06g35975 Brassica carinata HOM05D004128 ORTHO05D008395 2.7e-57 226.9 246 68.3
BcaC06g33999 Brassica carinata HOM05D004128 ORTHO05D008395 4.5e-52 209.5 246 62.2
C04p26220 Brassica napus HOM05D004128 ORTHO05D040950 1.5e-39 167.9 186 73.7
BolC4t24184H Brassica oleracea HOM05D004128 ORTHO05D040950 1.5e-39 167.9 186 73.7
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 2.7e-36 157.1 117 79.5
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 6.0e-36 156.0 239 46.4
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 3.6e-33 146.7 114 77.2
BcaC08g43405 Brassica carinata HOM05D007203 ORTHO05D094647 1.9e-29 134.4 153 60.1
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 3.2e-29 133.7 164 56.7
A03p58160 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-28 131.7 105 70.5
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 6.0e-28 129.4 233 46.8
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 3.0e-27 127.1 203 57.6
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 5.1e-27 126.3 253 44.7
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 1.1e-26 125.2 168 56.0
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 3.6e-25 120.2 180 52.2
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 1.8e-24 117.9 71 91.5
C04p49980 Brassica napus HOM05D007203 ORTHO05D027555 4.0e-24 116.7 135 59.3
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 5.2e-24 116.3 210 43.3
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-23 114.0 210 42.9
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 4.4e-23 113.2 154 52.6
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 1.7e-22 111.3 90 74.4
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 2.1e-20 104.4 257 37.7
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 1.0e-19 102.1 228 41.2
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 3.9e-19 100.1 264 36.7
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 4.3e-18 96.7 141 50.4
BcaC02g10649 Brassica carinata HOM05D004128 ORTHO05D017536 7.3e-18 95.9 69 76.8
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 1.6e-17 94.7 59 88.1
BraA07t29497Z Brassica rapa HOM05D004128 ORTHO05D017536 6.2e-17 92.8 56 91.1
BraA08t33243Z Brassica rapa HOM05D004128 ORTHO05D017536 6.2e-17 92.8 56 91.1
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 1.1e-16 92.0 62 82.3
BolC3t17978H Brassica oleracea HOM05D007203 ORTHO05D020127 1.4e-16 91.7 56 91.1
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-16 91.3 62 80.6
C08p21900 Brassica napus HOM05D007203 ORTHO05D020127 3.1e-16 90.5 56 89.3
A01p28280 Brassica napus HOM05D004128 ORTHO05D017536 1.2e-15 88.6 85 64.7
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 9.9e-15 85.5 80 62.5
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 9.9e-15 85.5 80 62.5
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 8.4e-14 82.4 202 40.1
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 4.2e-13 80.1 223 36.8
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 5.4e-13 79.7 74 62.2
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 5.4e-13 79.7 223 36.8
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 9.3e-13 79.0 227 36.6
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 2.7e-12 77.4 263 33.1
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 4.6e-12 76.6 56 80.4
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 4.6e-12 76.6 56 80.4
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 4.6e-12 76.6 184 40.8
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 4.6e-12 76.6 56 80.4
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 7.8e-12 75.9 68 72.1
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 7.8e-12 75.9 68 72.1
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 2.3e-11 74.3 56 76.8
BolC5t32922H Brassica oleracea HOM05D004128 ORTHO05D033837 3.9e-11 73.6 77 61.0
BcaC01g02783 Brassica carinata HOM05D004128 ORTHO05D008395 1.1e-10 72.0 61 65.6
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 1.5e-10 71.6 195 39.5
BcaC08g43729 Brassica carinata HOM05D007203 ORTHO05D092975 2.5e-10 70.9 68 64.7
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 2.5e-10 70.9 186 40.9
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 2.5e-10 70.9 68 64.7
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 3.3e-10 70.5 174 39.7
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 4.3e-10 70.1 53 79.2
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 5.6e-10 69.7 77 58.4
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 5.6e-10 69.7 77 58.4
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 9.6e-10 68.9 66 63.6
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 9.6e-10 68.9 66 65.2
BcaB03g12495 Brassica carinata HOM05D007203 ORTHO05D020127 1.3e-09 68.6 86 54.7
A02p26600 Brassica napus HOM05D007203 ORTHO05D020127 1.3e-09 68.6 68 64.7
BcaB03g16331 Brassica carinata HOM05D007203 ORTHO05D011558 1.6e-09 68.2 68 63.2
C04p52660 Brassica napus HOM05D007203 ORTHO05D020137 1.6e-09 68.2 67 64.2
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 2.1e-09 67.8 190 39.5
A01p36020 Brassica napus HOM05D007203 ORTHO05D020137 2.8e-09 67.4 68 63.2
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 3.6e-09 67.0 184 39.1
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 3.6e-09 67.0 185 40.0
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 3.6e-09 67.0 174 39.7
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 6.2e-09 66.2 115 50.4
BolC5t32659H Brassica oleracea HOM05D007203 ORTHO05D014981 8.1e-09 65.9 66 66.7
BraA04t16843Z Brassica rapa HOM05D007203 ORTHO05D020137 1.1e-08 65.5 67 62.7
BcaC02g09038 Brassica carinata HOM05D004128 ORTHO05D008395 1.8e-08 64.7 50 72.0
BcaC03g15868 Brassica carinata HOM05D007203 ORTHO05D008395 1.8e-08 64.7 63 68.3
C03p58910 Brassica napus HOM05D007203 ORTHO05D014981 2.4e-08 64.3 66 65.2
C05p39250 Brassica napus HOM05D007203 ORTHO05D039141 2.4e-08 64.3 63 68.3
C06p32870 Brassica napus HOM05D007203 ORTHO05D102649 2.4e-08 64.3 64 62.5
BcaB04g19338 Brassica carinata HOM05D007203 ORTHO05D011558 3.1e-08 63.9 74 55.4
A08p11270 Brassica napus HOM05D007203 ORTHO05D014981 3.1e-08 63.9 66 65.2
BraA08t33122Z Brassica rapa HOM05D007203 ORTHO05D014981 3.1e-08 63.9 66 65.2
BcaC09g48677 Brassica carinata HOM05D007203 ORTHO05D020137 4.0e-08 63.5 70 58.6
A08p11290 Brassica napus HOM05D007203 ORTHO05D014981 4.0e-08 63.5 63 66.7
C01p47030 Brassica napus HOM05D007203 ORTHO05D020137 4.0e-08 63.5 67 61.2
BolC1t04671H Brassica oleracea HOM05D007203 ORTHO05D020137 4.0e-08 63.5 67 61.2
BcaB01g01643 Brassica carinata HOM05D007203 ORTHO05D011558 5.3e-08 63.2 68 61.8
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 5.3e-08 63.2 82 52.4
A07p08910 Brassica napus HOM05D007203 ORTHO05D014981 6.9e-08 62.8 106 48.1
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 9.0e-08 62.4 87 55.2
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 9.0e-08 62.4 78 52.6
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 9.0e-08 62.4 89 53.9
BcaB01g02001 Brassica carinata HOM05D007203 ORTHO05D008395 1.2e-07 62.0 69 60.9
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 1.2e-07 62.0 78 52.6
C04p37860 Brassica napus HOM05D008735 ORTHO05D099266 1.2e-07 62.0 54 66.7
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-07 61.6 88 55.7
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 1.5e-07 61.6 88 55.7
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 2.0e-07 61.2 236 40.7
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 2.0e-07 61.2 74 59.5
BcaC05g26664 Brassica carinata HOM05D007203 ORTHO05D095942 2.0e-07 61.2 115 43.5
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 2.0e-07 61.2 101 50.5
C04p32440 Brassica napus HOM05D008735 ORTHO05D099532 2.6e-07 60.8 55 63.6
C06p20840 Brassica napus HOM05D007203 ORTHO05D014981 2.6e-07 60.8 61 67.2
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 2.6e-07 60.8 55 65.5
BolC6t37271H Brassica oleracea HOM05D007203 ORTHO05D014981 2.6e-07 60.8 61 67.2
BcaC04g23792 Brassica carinata HOM05D007203 ORTHO05D014981 3.4e-07 60.5 62 66.1
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 4.5e-07 60.1 88 55.7
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 4.5e-07 60.1 96 52.1
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 4.5e-07 60.1 90 54.4
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 5.8e-07 59.7 90 54.4
BraA08t33125Z Brassica rapa HOM05D007203 ORTHO05D014981 5.8e-07 59.7 61 65.6
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 7.6e-07 59.3 61 60.7
C02p36290 Brassica napus HOM05D004128 ORTHO05D097649 7.6e-07 59.3 87 55.2
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 7.6e-07 59.3 90 54.4
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 7.6e-07 59.3 85 49.4
A10p06920 Brassica napus HOM05D004128 ORTHO05D028143 1.3e-06 58.5 75 60.0
C03p80320 Brassica napus HOM05D008735 ORTHO05D097331 1.3e-06 58.5 80 52.5
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 1.3e-06 58.5 106 47.2
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 1.7e-06 58.2 78 50.0
BcaB07g32667 Brassica carinata HOM05D003147 ORTHO05D003245 2.2e-06 57.8 68 60.3
C02p38520 Brassica napus HOM05D007203 ORTHO05D014981 2.9e-06 57.4 63 63.5
A07p17780 Brassica napus HOM05D004128 ORTHO05D020127 3.8e-06 57.0 32 90.6
C03p79170 Brassica napus HOM05D008735 ORTHO05D098026 3.8e-06 57.0 80 52.5
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 6.4e-06 56.2 89 48.3
BcaC04g20469 Brassica carinata HOM05D007203 ORTHO05D014981 8.4e-06 55.8 53 67.9


User provided reference genes

Program Settings