Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p37350 Brassica napus HOM05D001614 ORTHO05D000988 7.7e-32 139.8 68 100.0
BolC9t56564H Brassica oleracea HOM05D001614 ORTHO05D000988 7.7e-32 139.8 68 100.0
A09p29250 Brassica napus HOM05D001614 ORTHO05D000988 5.2e-12 73.9 116 45.7
A09p29300 Brassica napus HOM05D001614 ORTHO05D000988 6.8e-12 73.6 116 45.7
A09p29160 Brassica napus HOM05D001614 ORTHO05D000988 8.8e-12 73.2 116 44.8
A09p29180 Brassica napus HOM05D001614 ORTHO05D000988 8.8e-12 73.2 116 44.8
A09p29200 Brassica napus HOM05D001614 ORTHO05D000988 8.8e-12 73.2 116 44.8
A09p29210 Brassica napus HOM05D001614 ORTHO05D000988 8.8e-12 73.2 116 44.8
A09p29220 Brassica napus HOM05D001614 ORTHO05D000988 8.8e-12 73.2 116 44.0
A09p29270 Brassica napus HOM05D001614 ORTHO05D000988 8.8e-12 73.2 116 44.8
BraA09t38483Z Brassica rapa HOM05D001614 ORTHO05D000988 8.8e-12 73.2 116 44.8
BraA09t38485Z Brassica rapa HOM05D001614 ORTHO05D000988 8.8e-12 73.2 116 44.8
BraA09t38488Z Brassica rapa HOM05D001614 ORTHO05D000988 8.8e-12 73.2 116 44.8
BraA09t38489Z Brassica rapa HOM05D001614 ORTHO05D000988 8.8e-12 73.2 116 44.8
BraA09t38490Z Brassica rapa HOM05D001614 ORTHO05D000988 8.8e-12 73.2 116 44.8
BraA09t38491Z Brassica rapa HOM05D001614 ORTHO05D000988 8.8e-12 73.2 116 44.8
BraA09t38492Z Brassica rapa HOM05D001614 ORTHO05D000988 8.8e-12 73.2 116 44.8
A09p29330 Brassica napus HOM05D001614 ORTHO05D000988 1.2e-11 72.8 116 44.8
A09p29320 Brassica napus HOM05D001614 ORTHO05D000988 1.5e-11 72.4 116 44.8
C09p37370 Brassica napus HOM05D001614 ORTHO05D000988 1.5e-11 72.4 116 44.8
BolC9t56566H Brassica oleracea HOM05D001614 ORTHO05D000988 1.5e-11 72.4 116 44.8
BraA09t38481Z Brassica rapa HOM05D001614 ORTHO05D000988 1.5e-11 72.4 116 44.8
A09p29290 Brassica napus HOM05D001614 ORTHO05D000988 2.0e-11 72.0 116 44.8
BraA09t38495Z Brassica rapa HOM05D001614 ORTHO05D000988 2.0e-11 72.0 116 44.8
BraA09t38482Z Brassica rapa HOM05D001614 ORTHO05D000988 2.6e-11 71.6 116 44.8
A09p29110 Brassica napus HOM05D001614 ORTHO05D000988 3.4e-11 71.2 116 44.0
C09p37360 Brassica napus HOM05D001614 ORTHO05D000988 4.4e-11 70.9 116 44.0
BolC9t56565H Brassica oleracea HOM05D001614 ORTHO05D000988 4.4e-11 70.9 116 44.0
A09p29230 Brassica napus HOM05D001614 ORTHO05D000988 5.7e-11 70.5 116 44.0
C09p37320 Brassica napus HOM05D001614 ORTHO05D000988 7.5e-11 70.1 116 44.0
BraA09t38479Z Brassica rapa HOM05D001614 ORTHO05D000988 7.5e-11 70.1 116 43.1
BraA09t38494Z Brassica rapa HOM05D001614 ORTHO05D000988 7.5e-11 70.1 116 43.1
A09p29120 Brassica napus HOM05D001614 ORTHO05D000988 9.8e-11 69.7 116 44.0
A09p29260 Brassica napus HOM05D001614 ORTHO05D000988 9.8e-11 69.7 116 42.2
A09p29310 Brassica napus HOM05D001614 ORTHO05D000988 9.8e-11 69.7 116 42.2
C09p37340 Brassica napus HOM05D001614 ORTHO05D000988 1.3e-10 69.3 116 44.0
BolC9t56563H Brassica oleracea HOM05D001614 ORTHO05D000988 1.3e-10 69.3 116 44.0
BraA09t38497Z Brassica rapa HOM05D001614 ORTHO05D000988 1.3e-10 69.3 116 44.0
BcaC04g20978 Brassica carinata HOM05D001614 ORTHO05D000988 1.7e-10 68.9 116 44.0
A09p29130 Brassica napus HOM05D001614 ORTHO05D000988 1.7e-10 68.9 116 43.1
BolC9t56540H Brassica oleracea HOM05D001614 ORTHO05D000988 1.7e-10 68.9 116 44.0
BraA09t38480Z Brassica rapa HOM05D001614 ORTHO05D000988 1.7e-10 68.9 116 43.1
C09p37330 Brassica napus HOM05D001614 ORTHO05D000988 2.2e-10 68.6 116 43.1
BolC9t56562H Brassica oleracea HOM05D001614 ORTHO05D000988 2.2e-10 68.6 116 43.1
BcaC04g20975 Brassica carinata HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
BcaC04g20979 Brassica carinata HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
C09p37020 Brassica napus HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
C09p37060 Brassica napus HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
C09p37080 Brassica napus HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
C09p37170 Brassica napus HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
C09p37180 Brassica napus HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
C09p37190 Brassica napus HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
C09p37220 Brassica napus HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
C09p37230 Brassica napus HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
C09p37260 Brassica napus HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
BolC9t56532H Brassica oleracea HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
BolC9t56536H Brassica oleracea HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
BolC9t56538H Brassica oleracea HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
BolC9t56549H Brassica oleracea HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
BolC9t56550H Brassica oleracea HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
BolC9t56554H Brassica oleracea HOM05D001614 ORTHO05D000988 2.8e-10 68.2 116 44.0
BraA09t38493Z Brassica rapa HOM05D001614 ORTHO05D000988 3.7e-10 67.8 116 42.2
A09p29190 Brassica napus HOM05D001614 ORTHO05D000988 4.8e-10 67.4 50 70.0
C09p37090 Brassica napus HOM05D001614 ORTHO05D000988 4.8e-10 67.4 116 43.1
BolC9t56539H Brassica oleracea HOM05D001614 ORTHO05D000988 4.8e-10 67.4 116 43.1
BraA09t38496Z Brassica rapa HOM05D001614 ORTHO05D000988 4.8e-10 67.4 116 41.4
C09p37310 Brassica napus HOM05D001614 ORTHO05D000988 6.3e-10 67.0 116 43.1
BolC9t56560H Brassica oleracea HOM05D001614 ORTHO05D000988 6.3e-10 67.0 116 43.1
C09p37110 Brassica napus HOM05D001614 ORTHO05D000988 8.3e-10 66.6 116 43.1
C09p37210 Brassica napus HOM05D001614 ORTHO05D000988 8.3e-10 66.6 116 43.1
C09p37280 Brassica napus HOM05D001614 ORTHO05D000988 8.3e-10 66.6 116 42.2
BolC9t56542H Brassica oleracea HOM05D001614 ORTHO05D000988 8.3e-10 66.6 116 43.1
BolC9t56552H Brassica oleracea HOM05D001614 ORTHO05D000988 8.3e-10 66.6 116 43.1
BolC9t56553H Brassica oleracea HOM05D001614 ORTHO05D000988 8.3e-10 66.6 116 43.1
BolC9t56555H Brassica oleracea HOM05D001614 ORTHO05D000988 8.3e-10 66.6 116 43.1
BolC9t56557H Brassica oleracea HOM05D001614 ORTHO05D000988 8.3e-10 66.6 116 42.2
BraA09t38487Z Brassica rapa HOM05D001614 ORTHO05D000988 8.3e-10 66.6 31 93.5
BolC9t56544H Brassica oleracea HOM05D001614 ORTHO05D000988 1.1e-09 66.2 116 42.2
BcaC04g20976 Brassica carinata HOM05D001614 ORTHO05D000988 1.4e-09 65.9 116 42.2
A09p29280 Brassica napus HOM05D001614 ORTHO05D000988 1.4e-09 65.9 50 66.0
C09p37000 Brassica napus HOM05D001614 ORTHO05D000988 1.4e-09 65.9 116 42.2
BolC9t56530H Brassica oleracea HOM05D001614 ORTHO05D000988 1.4e-09 65.9 116 42.2
C09p37140 Brassica napus HOM05D001614 ORTHO05D000988 1.8e-09 65.5 116 42.2
C09p37160 Brassica napus HOM05D001614 ORTHO05D000988 1.8e-09 65.5 116 42.2
BolC9t56545H Brassica oleracea HOM05D001614 ORTHO05D000988 1.8e-09 65.5 116 42.2
BolC9t56546H Brassica oleracea HOM05D001614 ORTHO05D000988 1.8e-09 65.5 116 42.2
BolC9t56548H Brassica oleracea HOM05D001614 ORTHO05D000988 1.8e-09 65.5 116 42.2
C09p37290 Brassica napus HOM05D001614 ORTHO05D000988 2.4e-09 65.1 116 42.2
BolC9t56558H Brassica oleracea HOM05D001614 ORTHO05D000988 2.4e-09 65.1 116 42.2
A09p29140 Brassica napus HOM05D001614 ORTHO05D000988 3.1e-09 64.7 50 68.0
C09p37070 Brassica napus HOM05D001614 ORTHO05D000988 4.1e-09 64.3 116 43.1
BolC9t56537H Brassica oleracea HOM05D001614 ORTHO05D000988 4.1e-09 64.3 116 43.1
BcaC04g20977 Brassica carinata HOM05D001614 ORTHO05D000988 5.4e-09 63.9 116 40.5
C09p37130 Brassica napus HOM05D001614 ORTHO05D000988 5.4e-09 63.9 116 40.5
C09p37250 Brassica napus HOM05D001614 ORTHO05D000988 5.4e-09 63.9 116 40.5
C09p37040 Brassica napus HOM05D001614 ORTHO05D000988 7.0e-09 63.5 116 42.2
BolC9t56534H Brassica oleracea HOM05D001614 ORTHO05D000988 7.0e-09 63.5 116 42.2
C09p37100 Brassica napus HOM05D001614 ORTHO05D000988 9.1e-09 63.2 112 42.0
BolC9t56559H Brassica oleracea HOM05D001614 ORTHO05D000988 9.1e-09 63.2 121 42.1
BolC9t56551H Brassica oleracea HOM05D001614 ORTHO05D000988 1.2e-08 62.8 113 41.6
C09p37010 Brassica napus HOM05D001614 ORTHO05D000988 1.6e-08 62.4 116 41.4
C09p37120 Brassica napus HOM05D001614 ORTHO05D000988 1.6e-08 62.4 34 85.3
C09p37240 Brassica napus HOM05D001614 ORTHO05D000988 1.6e-08 62.4 50 66.0
BolC9t56531H Brassica oleracea HOM05D001614 ORTHO05D000988 1.6e-08 62.4 116 41.4
BolC9t56541H Brassica oleracea HOM05D001614 ORTHO05D000988 1.6e-08 62.4 34 85.3
BolC9t56543H Brassica oleracea HOM05D001614 ORTHO05D000988 1.6e-08 62.4 34 85.3
BolC9t56547H Brassica oleracea HOM05D001614 ORTHO05D000988 1.6e-08 62.4 34 85.3
C09p37270 Brassica napus HOM05D001614 ORTHO05D000988 2.0e-08 62.0 112 42.0
BolC9t56556H Brassica oleracea HOM05D001614 ORTHO05D000988 2.0e-08 62.0 112 42.0
A09p29240 Brassica napus HOM05D001614 ORTHO05D000988 2.7e-08 61.6 98 46.9
C09p37300 Brassica napus HOM05D001614 ORTHO05D000988 2.7e-08 61.6 121 41.3
C09p37380 Brassica napus HOM05D001614 ORTHO05D000988 3.5e-08 61.2 50 64.0
BolC9t56567H Brassica oleracea HOM05D001614 ORTHO05D000988 3.5e-08 61.2 50 64.0
C09p37030 Brassica napus HOM05D001614 ORTHO05D000988 7.7e-08 60.1 112 41.1
C09p37050 Brassica napus HOM05D001614 ORTHO05D000988 7.7e-08 60.1 50 64.0
BolC9t56533H Brassica oleracea HOM05D001614 ORTHO05D000988 7.7e-08 60.1 112 41.1
BolC9t56535H Brassica oleracea HOM05D001614 ORTHO05D000988 7.7e-08 60.1 50 64.0
BcaB01g01427 Brassica carinata HOM05D001614 ORTHO05D000988 1.3e-07 59.3 34 76.5
AT5G42567 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 2.3e-07 58.5 34 76.5
AL8G17860 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 2.9e-07 58.2 34 76.5
AL8G17870 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 2.9e-07 58.2 34 76.5
Thhalv10002263m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 2.9e-07 58.2 35 71.4
AT3G30383 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 3.8e-07 57.8 34 76.5
AT5G34883 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 3.8e-07 57.8 34 76.5
AT5G34885 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 3.8e-07 57.8 34 76.5
AT5G34887 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 3.8e-07 57.8 34 76.5
AT5G34882 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 5.0e-07 57.4 48 62.5
AT5G42955 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 5.0e-07 57.4 33 75.8
Thhalv10002161m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 6.6e-07 57.0 50 56.0
Thhalv10002170m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 6.6e-07 57.0 30 76.7
Thhalv10002202m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 6.6e-07 57.0 30 76.7
Thhalv10002207m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 6.6e-07 57.0 30 76.7
Thhalv10002224m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 6.6e-07 57.0 30 76.7
Thhalv10002250m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 6.6e-07 57.0 30 76.7
Thhalv10002265m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 6.6e-07 57.0 30 76.7
Thhalv10002305m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 6.6e-07 57.0 30 76.7
Thhalv10002218m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 8.6e-07 56.6 32 71.9
AL8G17820 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 1.1e-06 56.2 48 60.4
AL8G17830 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 1.1e-06 56.2 48 60.4
AL8G17840 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 1.1e-06 56.2 48 60.4
AT3G30385 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 1.1e-06 56.2 34 73.5
AT3G30387 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 1.1e-06 56.2 34 73.5
Thhalv10002260m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 1.1e-06 56.2 30 76.7
Thhalv10002294m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 1.1e-06 56.2 29 79.3
Thhalv10002222m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 1.5e-06 55.8 30 76.7
Sp4g07070 Schrenkiella parvula HOM05D011363 ORTHO05D003044 1.5e-06 55.8 50 54.0
AT5G34905 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 1.9e-06 55.5 34 73.5
AL585U10010 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 2.5e-06 55.1 34 73.5
AL585U10020 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 2.5e-06 55.1 34 73.5
AL8G19270 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 2.5e-06 55.1 34 70.6
Thhalv10002277m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 2.5e-06 55.1 30 70.0
Thhalv10002163m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 3.3e-06 54.7 30 73.3
Thhalv10002251m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 3.3e-06 54.7 30 73.3
Thhalv10002278m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 3.3e-06 54.7 30 73.3
Thhalv10002291m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 3.3e-06 54.7 30 73.3
Thhalv10002325m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 3.3e-06 54.7 30 73.3
AL8G17850 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 4.2e-06 54.3 34 73.5
Thhalv10002239m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 4.2e-06 54.3 30 70.0
AL474U10010 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 5.5e-06 53.9 34 70.6
CARHR289690 Cardamine hirsuta HOM05D001614 ORTHO05D000988 5.5e-06 53.9 53 54.7
C09p37150 Brassica napus HOM05D001614 ORTHO05D000988 9.5e-06 53.1 116 38.8
Carub.0002s0810 Capsella rubella HOM05D001614 ORTHO05D000988 9.5e-06 53.1 55 50.9
Carub.0002s0925 Capsella rubella HOM05D001614 ORTHO05D000988 9.5e-06 53.1 32 65.6


User provided reference genes

Program Settings