Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p36930 Brassica napus HOM05D007568 ORTHO05D009779 1.4e-93 346.3 173 100.0
BolC9t56523H Brassica oleracea HOM05D007568 ORTHO05D009779 1.4e-93 346.3 173 100.0
C07p00760 Brassica napus HOM05D007568 ORTHO05D009779 1.3e-83 313.2 164 95.7
A04p34410 Brassica napus HOM05D007568 ORTHO05D009779 2.2e-67 259.2 134 95.5
BolC8t50060H Brassica oleracea HOM05D007568 ORTHO05D009779 8.2e-54 214.2 137 81.8
BcaC05g26582 Brassica carinata HOM05D007568 ORTHO05D009779 2.5e-34 149.4 173 43.9
A05p27540 Brassica napus HOM05D007568 ORTHO05D009779 3.2e-34 149.1 175 44.0
A07p20370 Brassica napus HOM05D007568 ORTHO05D009779 6.1e-33 144.8 79 91.1
C02p26050 Brassica napus HOM05D007568 ORTHO05D009779 7.9e-33 144.4 175 43.4
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 2.2e-30 136.3 138 46.4
BraA09t40709Z Brassica rapa HOM05D007568 ORTHO05D009779 2.2e-30 136.3 168 39.3
A07p36520 Brassica napus HOM05D007568 ORTHO05D009779 2.8e-30 136.0 176 40.3
BolC4t25354H Brassica oleracea HOM05D007568 ORTHO05D009779 1.4e-29 133.7 175 42.3
BcaC01g00913 Brassica carinata HOM05D007568 ORTHO05D009779 9.1e-29 131.0 149 44.3
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 6.5e-27 124.8 168 35.7
C03p85880 Brassica napus HOM05D007568 ORTHO05D009779 9.4e-26 120.9 135 45.9
BolC7t45261H Brassica oleracea HOM05D007568 ORTHO05D009779 1.0e-24 117.5 175 37.1
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 1.4e-24 117.1 168 34.5
BcaC01g06154 Brassica carinata HOM05D007568 ORTHO05D009779 4.0e-24 115.5 173 36.4
A03p30420 Brassica napus HOM05D007568 ORTHO05D009779 5.2e-24 115.2 66 80.3
C01p25160 Brassica napus HOM05D030822 ORTHO05D009779 1.1e-23 114.0 172 36.6
BcaC09g50463 Brassica carinata HOM05D007568 ORTHO05D009779 1.5e-23 113.6 173 36.4
C09p27130 Brassica napus HOM05D007568 ORTHO05D009779 1.5e-23 113.6 168 36.3
BolC3t14260H Brassica oleracea HOM05D007568 ORTHO05D009779 4.4e-23 112.1 168 35.7
C03p18690 Brassica napus HOM05D007568 ORTHO05D009779 9.7e-23 110.9 168 35.1
C04p16590 Brassica napus HOM05D030822 ORTHO05D009779 1.3e-22 110.5 129 41.9
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 1.7e-22 110.2 148 37.8
BolC9t55448H Brassica oleracea HOM05D007568 ORTHO05D009779 1.7e-22 110.2 168 35.1
A02p32020 Brassica napus HOM05D007568 ORTHO05D009779 4.8e-22 108.6 151 34.4
BraA02t08213Z Brassica rapa HOM05D007568 ORTHO05D009779 4.8e-22 108.6 151 34.4
C03p86040 Brassica napus HOM05D007568 ORTHO05D009779 6.3e-22 108.2 148 37.8
BcaB04g18340 Brassica carinata HOM05D007568 ORTHO05D009779 3.1e-21 105.9 150 36.0
BcaC01g02309 Brassica carinata HOM05D007568 ORTHO05D009779 4.1e-21 105.5 132 42.4
BcaC01g02319 Brassica carinata HOM05D007568 ORTHO05D009779 9.1e-21 104.4 134 42.5
BcaNung01428 Brassica carinata HOM05D007568 ORTHO05D009779 1.6e-20 103.6 188 31.4
A08p24970 Brassica napus HOM05D007568 ORTHO05D009779 2.0e-20 103.2 148 34.5
C04p50500 Brassica napus HOM05D007568 ORTHO05D009779 1.0e-19 100.9 172 34.3
A03p66230 Brassica napus HOM05D007568 ORTHO05D009779 1.3e-19 100.5 166 34.3
BcaC01g01043 Brassica carinata HOM05D007568 ORTHO05D009779 5.0e-19 98.6 156 32.7
BcaB02g11011 Brassica carinata HOM05D007568 ORTHO05D009779 7.2e-18 94.7 173 31.8
BcaB07g30022 Brassica carinata HOM05D007568 ORTHO05D009779 3.6e-17 92.4 142 40.1
BcaC02g08832 Brassica carinata HOM05D007568 ORTHO05D009779 4.7e-17 92.0 134 35.8
BcaB05g24631 Brassica carinata HOM05D007568 ORTHO05D009779 8.0e-17 91.3 134 35.1
C03p18140 Brassica napus HOM05D007568 ORTHO05D009779 5.7e-15 85.1 110 37.3
BraA03t15678Z Brassica rapa HOM05D007568 ORTHO05D009779 5.7e-15 85.1 110 37.3
BcaB04g18026 Brassica carinata HOM05D007568 ORTHO05D009779 1.8e-13 80.1 109 35.8
A05p18670 Brassica napus HOM05D007568 ORTHO05D009779 4.1e-13 79.0 113 35.4
BolC4t26648H Brassica oleracea HOM05D007568 ORTHO05D009779 5.4e-13 78.6 110 34.5
AL4G17590 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.5e-12 75.9 161 29.8
Carub.0001s3517 Capsella rubella HOM05D000353 ORTHO05D000174 7.7e-12 74.7 151 27.2
BolC3t20878H Brassica oleracea HOM05D007568 ORTHO05D009779 1.7e-11 73.6 91 45.1
Thhalv10027192m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 8.5e-11 71.2 129 29.5
A09p09830 Brassica napus HOM05D007568 ORTHO05D009779 1.5e-10 70.5 75 49.3
Carub.0001s3685 Capsella rubella HOM05D012762 ORTHO05D011313 4.2e-10 68.9 112 30.4
Carub.0012s0012 Capsella rubella HOM05D012762 ORTHO05D011313 4.2e-10 68.9 112 30.4
AL1G50720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 9.4e-10 67.8 130 29.2
Carub.0001s3688 Capsella rubella HOM05D007965 ORTHO05D010269 1.6e-09 67.0 141 29.8
AL2G19900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.1e-09 66.6 130 29.2
AL2G22230 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.1e-09 66.6 130 29.2
AL4G20700 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.1e-09 66.6 130 29.2
AL6G41900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.1e-09 66.6 130 29.2
C03p28750 Brassica napus HOM05D007568 ORTHO05D041881 2.1e-09 66.6 82 35.4
BolC3t15795H Brassica oleracea HOM05D007568 ORTHO05D041881 2.1e-09 66.6 82 35.4
AL8G21940 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.7e-09 66.2 130 29.2
BcaB04g20792 Brassica carinata HOM05D007568 ORTHO05D009779 2.7e-09 66.2 168 27.4
AL7G11630 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.7e-09 65.5 130 29.2
Carub.0007s3247 Capsella rubella HOM05D000353 ORTHO05D000174 4.7e-09 65.5 144 27.1
BcaC06g36422 Brassica carinata HOM05D007568 ORTHO05D009779 6.1e-09 65.1 89 38.2
Carub.0003s3392 Capsella rubella HOM05D000353 ORTHO05D000174 1.0e-08 64.3 144 29.2
AL1G55590 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.3e-08 63.2 155 27.7
AL5G11810 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.3e-08 63.2 128 28.9
BcaC05g29164 Brassica carinata HOM05D007568 ORTHO05D009779 3.0e-08 62.8 111 35.1
Carub.0001s3741 Capsella rubella HOM05D000353 ORTHO05D000174 3.0e-08 62.8 147 27.9
AL1G50690 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL1G59740 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL27U10060 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL2G16090 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL2G18690 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL2G22580 Arabidopsis lyrata HOM05D000022 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL2G23190 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL2G25150 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL3G39070 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL3G51030 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL4G20730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL5G12670 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL5G19810 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL6G34510 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL6G41960 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL7G11680 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL7G15190 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL7G49540 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL8G20930 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL8G23600 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
AL9U11530 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-08 62.0 155 27.7
Carub.0001s3686 Capsella rubella HOM05D012762 ORTHO05D011313 5.2e-08 62.0 136 28.7
Carub.0001s3690 Capsella rubella HOM05D000353 ORTHO05D021412 5.2e-08 62.0 141 26.2
Carub.0045s0001 Capsella rubella HOM05D007965 ORTHO05D010269 5.2e-08 62.0 125 29.6
AL5G29730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.8e-08 61.6 155 27.7
Carub.0016s0012 Capsella rubella HOM05D007965 ORTHO05D010269 6.8e-08 61.6 164 25.6
AL1G50240 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.8e-08 61.2 155 27.7
AL6G43510 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.8e-08 61.2 155 27.1
AL8G18160 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.8e-08 61.2 155 27.1
Carub.0005s0866 Capsella rubella HOM05D012762 ORTHO05D011313 8.8e-08 61.2 141 27.0
Carub.0007s3186 Capsella rubella HOM05D007965 ORTHO05D010269 8.8e-08 61.2 150 26.7
AL3G41740 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.2e-07 60.8 155 27.1
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 1.2e-07 60.8 169 26.0
Carub.0016s0006 Capsella rubella HOM05D007965 ORTHO05D010269 2.0e-07 60.1 125 28.8
Medtr4g058660 Medicago truncatula HOM05D008036 ORTHO05D000174 2.0e-07 60.1 189 27.0
Medtr7g451880 Medicago truncatula HOM05D008036 ORTHO05D000174 2.0e-07 60.1 189 27.0
AL1G44420 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.6e-07 59.7 155 27.1
AL8G18830 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.6e-07 59.7 155 27.1
C03p19550 Brassica napus HOM05D007568 ORTHO05D009779 2.6e-07 59.7 89 32.6
C05p33930 Brassica napus HOM05D030822 ORTHO05D099489 2.6e-07 59.7 71 40.8
BraA07t28122Z Brassica rapa HOM05D000353 ORTHO05D000174 2.6e-07 59.7 164 24.4
Medtr1g023370 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-07 59.7 177 27.7
Medtr2g005490 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-07 59.7 177 27.7
Medtr2g007410 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-07 59.7 177 27.7
Medtr2g010570 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-07 59.7 177 27.7
Medtr3g031190 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-07 59.7 177 27.7
Medtr5g030110 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-07 59.7 177 27.7
Medtr5g056290 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-07 59.7 177 27.7
Medtr5g081190 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-07 59.7 177 27.7
Medtr5g091480 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-07 59.7 177 27.7
Medtr6g087820 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-07 59.7 177 27.7
Medtr7g024060 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-07 59.7 177 27.7
Medtr8g005940 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-07 59.7 177 27.1
Medtr8g446640 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-07 59.7 137 29.2
AL1G45320 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.7e-07 58.5 155 26.5
Carub.0008s0746 Capsella rubella HOM05D007965 ORTHO05D010269 7.5e-07 58.2 164 26.2
AL7G48330 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.3e-06 57.4 155 27.1
BcaC04g21059 Brassica carinata HOM05D000353 ORTHO05D000174 1.3e-06 57.4 168 25.0
Carub.0012s0008 Capsella rubella HOM05D000353 ORTHO05D010269 1.3e-06 57.4 141 25.5
AL8G17260 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.7e-06 57.0 155 26.5
C06p20120 Brassica napus HOM05D007568 ORTHO05D009779 1.7e-06 57.0 60 40.0
Carub.0001s3421 Capsella rubella HOM05D012762 ORTHO05D011313 2.2e-06 56.6 133 27.8
AT1G52950 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 4.9e-06 55.5 149 23.5
BcaC03g17782 Brassica carinata HOM05D000353 ORTHO05D000174 4.9e-06 55.5 168 25.0
C08p14630 Brassica napus HOM05D000353 ORTHO05D000174 4.9e-06 55.5 132 28.8
Carub.0005s2382 Capsella rubella HOM05D000353 ORTHO05D000174 4.9e-06 55.5 122 28.7
Thhalv10023889m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.9e-06 55.5 148 27.0
Medtr7g074180 Medicago truncatula HOM05D008036 ORTHO05D000174 4.9e-06 55.5 177 26.6
AL5G12730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.3e-06 55.1 120 26.7
C08p14700 Brassica napus HOM05D000353 ORTHO05D000174 6.3e-06 55.1 116 29.3
BolC2t09294H Brassica oleracea HOM05D007568 ORTHO05D009779 6.3e-06 55.1 90 34.4
Thhalv10027364m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 8.3e-06 54.7 148 27.0
Medtr1g011490 Medicago truncatula HOM05D008036 ORTHO05D000174 8.3e-06 54.7 167 27.5
Medtr1g082860 Medicago truncatula HOM05D008036 ORTHO05D000174 8.3e-06 54.7 167 27.5


User provided reference genes

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