Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p36180 Brassica napus HOM05D017705 ORTHO05D027179 1.5e-68 262.7 132 100.0
BcaC04g21055 Brassica carinata HOM05D017705 ORTHO05D027179 8.4e-51 203.8 112 92.9
C08p28290 Brassica napus HOM05D017705 ORTHO05D027179 4.6e-49 198.0 112 91.1
C08p28280 Brassica napus HOM05D001298 ORTHO05D027179 6.3e-30 134.4 67 95.5
BraA05t19474Z Brassica rapa HOM05D000146 ORTHO05D000178 9.4e-18 94.0 81 66.7
BcaB02g08867 Brassica carinata HOM05D000146 ORTHO05D000178 1.6e-17 93.2 129 49.6
BcaC02g12266 Brassica carinata HOM05D000146 ORTHO05D000178 8.0e-17 90.9 61 78.7
C04p05830 Brassica napus HOM05D000146 ORTHO05D000178 8.0e-17 90.9 61 78.7
BolC4t22212H Brassica oleracea HOM05D000146 ORTHO05D000178 8.0e-17 90.9 61 78.7
A05p05000 Brassica napus HOM05D000146 ORTHO05D000178 1.0e-16 90.5 81 66.7
C02p25190 Brassica napus HOM05D017705 ORTHO05D039337 6.7e-16 87.8 56 82.1
BcaC08g45946 Brassica carinata HOM05D017705 ORTHO05D032647 8.8e-16 87.4 56 80.4
C06p37440 Brassica napus HOM05D007420 ORTHO05D032647 8.8e-16 87.4 56 80.4
BolC6t38846H Brassica oleracea HOM05D017705 ORTHO05D032647 8.8e-16 87.4 56 80.4
Thhalv10001322m.g Eutrema salsugineum HOM05D000146 ORTHO05D000178 1.1e-15 87.0 154 42.9
A04p33500 Brassica napus HOM05D000146 ORTHO05D000178 1.7e-14 83.2 95 57.9
Sp4g26920 Schrenkiella parvula HOM05D000146 ORTHO05D000178 2.2e-14 82.8 155 42.6
BraA04t18812Z Brassica rapa HOM05D000146 ORTHO05D000178 6.3e-14 81.3 96 56.2
BcaC02g07117 Brassica carinata HOM05D000146 ORTHO05D000178 8.2e-14 80.9 91 58.2
AT2G44830 Arabidopsis thaliana HOM05D000146 ORTHO05D000178 1.8e-13 79.7 154 42.2
BolC4t28630H Brassica oleracea HOM05D000146 ORTHO05D000178 3.1e-13 79.0 112 50.0
AL4G43910 Arabidopsis lyrata HOM05D000146 ORTHO05D000178 4.1e-13 78.6 154 41.6
CARHR140050 Cardamine hirsuta HOM05D000146 ORTHO05D000178 1.2e-12 77.0 72 62.5
C04p71260 Brassica napus HOM05D000146 ORTHO05D000178 1.6e-12 76.6 112 49.1
Carub.0004s2740 Capsella rubella HOM05D000146 ORTHO05D000178 2.0e-12 76.3 155 40.6
BcaC03g14986 Brassica carinata HOM05D017705 ORTHO05D039337 3.8e-11 72.0 46 82.6
BcaB06g29401 Brassica carinata HOM05D000146 ORTHO05D000178 6.1e-09 64.7 106 46.2
Aa31LG1G26370 Aethionema arabicum HOM05D000146 ORTHO05D000178 3.0e-08 62.4 65 56.9


User provided reference genes

Program Settings