Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 2.4e-181 638.6 305 100.0
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 2.5e-66 256.5 307 43.0
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 6.4e-62 241.9 307 41.4
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 6.0e-60 235.3 305 40.7
FvH4_4g01311 Fragaria vesca HOM05D007314 ORTHO05D003768 6.9e-40 168.7 242 36.4
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 8.2e-33 145.2 307 30.6
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.6e-28 131.0 166 42.8
RcHm_v2.0_Chr7g0200591 Rosa chinensis HOM05D007314 ORTHO05D003768 1.1e-26 124.8 148 40.5
RcHm_v2.0_Chr5g0059371 Rosa chinensis HOM05D007314 ORTHO05D003768 3.7e-17 93.2 92 48.9
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.4e-16 91.3 89 41.6
BolC3t20566H Brassica oleracea HOM05D007314 ORTHO05D003768 3.1e-16 90.1 103 41.7
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.1e-16 89.7 92 41.3
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.1e-16 89.7 88 42.0
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.3e-16 89.4 89 41.6
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 9.1e-16 88.6 89 41.6
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 2.0e-15 87.4 82 43.9
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.7e-15 87.0 97 38.1
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.5e-15 86.7 88 40.9
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 7.7e-15 85.5 80 47.5
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.0e-14 85.1 81 42.0
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.7e-14 84.3 77 42.9
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 2.9e-14 83.6 91 37.4
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.0e-14 82.8 82 41.5
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.2e-13 80.1 87 41.4
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 9.4e-13 78.6 75 50.7
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.1e-12 77.4 77 42.9
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.1e-12 77.4 81 39.5
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 3.6e-12 76.6 126 34.1
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 4.7e-12 76.3 75 50.7
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 4.7e-12 76.3 75 48.0
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.7e-12 76.3 86 40.7
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 4.7e-12 76.3 91 36.3
CsaV3_4G009050 Cucumis sativus L. HOM05D007314 ORTHO05D003768 8.0e-12 75.5 76 39.5
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 8.0e-12 75.5 65 44.6
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.0e-11 75.1 75 45.3
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 1.4e-11 74.7 75 46.7
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 2.3e-11 73.9 101 39.6
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.0e-11 73.2 66 40.9
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.0e-11 73.2 88 39.8
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 5.2e-11 72.8 107 34.6
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.8e-11 72.4 75 40.0
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 6.8e-11 72.4 91 35.2
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 8.8e-11 72.0 86 38.4
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-10 71.6 86 38.4
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 1.2e-10 71.6 62 51.6
FvH4_3g21852 Fragaria vesca HOM05D008321 ORTHO05D003768 2.0e-10 70.9 107 34.6
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 2.0e-10 70.9 126 29.4
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 2.6e-10 70.5 97 41.2
FAN07G1302 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.4e-10 70.1 81 40.7
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 9.8e-10 68.6 81 32.1
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 9.8e-10 68.6 107 33.6
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 1.3e-09 68.2 115 31.3
MELO3C035437.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.3e-09 68.2 76 39.5
RcHm_v2.0_Chr7g0177401 Rosa chinensis HOM05D007314 ORTHO05D003768 1.3e-09 68.2 57 50.9
FvH4_1g29373 Fragaria vesca HOM05D008321 ORTHO05D003768 1.7e-09 67.8 81 37.0
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.2e-09 67.4 113 36.3
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 4.8e-09 66.2 83 41.0
BolC2t08290H Brassica oleracea HOM05D007314 ORTHO05D003768 6.3e-09 65.9 145 32.4
MELO3C029411.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.3e-09 65.5 72 38.9
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 8.3e-09 65.5 112 31.2
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.1e-08 65.1 117 35.0
FAN15G1405 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.4e-08 64.7 77 39.0
Aqoxy3G00743 Aquilegia oxysepala HOM05D053128 ORTHO05D003768 1.8e-08 64.3 79 35.4
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.8e-08 64.3 129 32.6
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 1.8e-08 64.3 63 41.3
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 1.2e-07 61.6 83 36.1
BolC2t10485H Brassica oleracea HOM05D007314 ORTHO05D003768 4.5e-07 59.7 67 44.8
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 5.9e-07 59.3 99 36.4
Aqoxy3G00744 Aquilegia oxysepala HOM05D053128 ORTHO05D003768 7.7e-07 58.9 96 30.2
MELO3C029734.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.0e-06 58.5 67 38.8
Atru.chr4.2623 Acer truncatum HOM05D008321 ORTHO05D003768 6.5e-06 55.8 81 38.3
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 6.5e-06 55.8 110 34.5
CSS0009587 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 8.6e-06 55.5 62 43.5
CSS0011469 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 8.6e-06 55.5 62 43.5
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.6e-06 55.5 58 37.9
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 8.6e-06 55.5 62 45.2


User provided reference genes

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