Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p35940 Brassica napus HOM05D001444 ORTHO05D014980 5.6e-130 467.6 237 100.0
BolC9t56426H Brassica oleracea HOM05D001444 ORTHO05D014980 5.6e-130 467.6 237 100.0
C05p14480 Brassica napus HOM05D001444 ORTHO05D014980 2.0e-127 459.1 237 98.7
C08p03360 Brassica napus HOM05D001444 ORTHO05D014980 1.5e-122 443.0 237 96.6
C05p39200 Brassica napus HOM05D001444 ORTHO05D014980 8.4e-118 427.2 223 97.8
BcaC04g21082 Brassica carinata HOM05D001444 ORTHO05D014980 3.1e-56 222.6 165 77.0
BraA02t08868Z Brassica rapa HOM05D001444 ORTHO05D003766 2.8e-49 199.5 113 90.3
A02p38980 Brassica napus HOM05D001444 ORTHO05D003766 3.7e-49 199.1 103 97.1
BcaC03g17826 Brassica carinata HOM05D001444 ORTHO05D003766 8.3e-49 198.0 113 89.4
C02p58570 Brassica napus HOM05D001444 ORTHO05D003766 1.1e-48 197.6 102 97.1
BolC2t11917H Brassica oleracea HOM05D001444 ORTHO05D003766 1.1e-48 197.6 102 97.1
Sp2g21140 Schrenkiella parvula HOM05D001444 ORTHO05D003766 4.1e-48 195.7 102 96.1
BcaNung03919 Brassica carinata HOM05D001444 ORTHO05D003766 5.4e-48 195.3 102 96.1
C07p41360 Brassica napus HOM05D001444 ORTHO05D003766 5.4e-48 195.3 102 96.1
A06p37080 Brassica napus HOM05D001444 ORTHO05D003766 1.6e-47 193.7 102 95.1
Carub.0006s2452 Capsella rubella HOM05D001444 ORTHO05D003766 2.0e-47 193.4 103 94.2
AL6G38730 Arabidopsis lyrata HOM05D001444 ORTHO05D003766 5.9e-47 191.8 113 86.7
BcaNung03668 Brassica carinata HOM05D001444 ORTHO05D003766 1.0e-46 191.0 103 93.2
Thhalv10003617m.g Eutrema salsugineum HOM05D001444 ORTHO05D003766 1.0e-46 191.0 113 85.8
CARHR186670 Cardamine hirsuta HOM05D001444 ORTHO05D003766 1.7e-46 190.3 113 85.8
AT5G26860 Arabidopsis thaliana HOM05D001444 ORTHO05D003766 3.9e-46 189.1 113 85.0
BraA06t26633Z Brassica rapa HOM05D001444 ORTHO05D003766 3.9e-46 189.1 103 94.2
BolC7t44666H Brassica oleracea HOM05D001444 ORTHO05D003766 2.5e-45 186.4 104 92.3
ClCG00G002460 Citrullus lanatus HOM05D001444 ORTHO05D003766 1.2e-44 184.1 113 79.6
ClCG02G014960 Citrullus lanatus HOM05D001444 ORTHO05D003766 1.2e-44 184.1 113 79.6
Ciclev10000120m.g Citrus clementina HOM05D001444 ORTHO05D003766 1.2e-44 184.1 102 88.2
QL03p013621 Quercus lobata HOM05D001444 ORTHO05D003766 2.1e-44 183.3 113 79.6
QL03p039871 Quercus lobata HOM05D001444 ORTHO05D003766 2.1e-44 183.3 113 79.6
GSVIVG01031236001 Vitis vinifera HOM05D001444 ORTHO05D003766 2.1e-44 183.3 113 79.6
CANSAT54G1984 Cannabis sativa HOM05D001444 ORTHO05D003766 2.8e-44 183.0 113 80.5
CiPaw.07G029500 Carya illinoinensis HOM05D001444 ORTHO05D003766 2.8e-44 183.0 113 80.5
BolC9t58100H Brassica oleracea HOM05D001444 ORTHO05D014980 3.6e-44 182.6 181 62.4
Hma1.2p1_0008F-1.1_g005610 Hydrangea macrophylla HOM05D001444 ORTHO05D003766 6.1e-44 181.8 103 86.4
SGA_v2.0_scaffold37G14611 Striga asiatica HOM05D001444 ORTHO05D003766 6.1e-44 181.8 103 84.5
Cfa006700 Carpinus fangiana HOM05D001444 ORTHO05D003766 8.0e-44 181.4 113 78.8
Prupe.2G038600 Prunus persica HOM05D001444 ORTHO05D003766 8.0e-44 181.4 113 77.9
Sabra13G0007500 Salix brachista HOM05D001444 ORTHO05D003766 8.0e-44 181.4 113 78.8
Glyma.20G097700 Glycine max HOM05D001444 ORTHO05D003766 1.0e-43 181.0 113 77.9
VMungo0720G2265 Vigna mungo HOM05D001444 ORTHO05D003766 1.0e-43 181.0 113 78.8
MD12G1206100 Malus domestica HOM05D001444 ORTHO05D003766 1.4e-43 180.6 113 77.9
Glyma.10G147200 Glycine max HOM05D001444 ORTHO05D003766 1.8e-43 180.3 113 77.9
Manes.08G111500 Manihot esculenta HOM05D001444 ORTHO05D003766 1.8e-43 180.3 113 79.6
Potri.013G008900 Populus trichocarpa HOM05D001444 ORTHO05D003766 2.3e-43 179.9 113 78.8
Cc02_g35000 Coffea canephora HOM05D001444 ORTHO05D003766 4.0e-43 179.1 113 76.1
Nn3g21688 Nelumbo nucifera HOM05D001444 ORTHO05D003766 4.0e-43 179.1 113 77.0
Prupe.6G313300 Prunus persica HOM05D001444 ORTHO05D003766 4.0e-43 179.1 113 77.0
TAR633G2402 Trochodendron aralioides HOM05D001444 ORTHO05D003766 4.0e-43 179.1 103 84.5
HanXRQChr16g0513821 Helianthus annuus HOM05D001444 ORTHO05D003766 5.2e-43 178.7 102 85.3
MD02G1284000 Malus domestica HOM05D001444 ORTHO05D003766 5.2e-43 178.7 113 77.0
Potri.005G017600 Populus trichocarpa HOM05D001444 ORTHO05D003766 5.2e-43 178.7 113 77.9
TWI56G1076 Tripterygium wilfordii HOM05D001444 ORTHO05D003766 5.2e-43 178.7 113 77.9
CsaV3_2G007040 Cucumis sativus L. HOM05D001444 ORTHO05D003766 6.8e-43 178.3 113 77.0
FAN05G3889 Fragaria x ananassa HOM05D001444 ORTHO05D003766 6.8e-43 178.3 113 77.9
Thecc.05G322700 Theobroma cacao HOM05D001444 ORTHO05D003766 6.8e-43 178.3 115 78.3
FvH4_6g07420 Fragaria vesca HOM05D001444 ORTHO05D003766 8.9e-43 177.9 113 77.0
FAN02G3316 Fragaria x ananassa HOM05D001444 ORTHO05D003766 8.9e-43 177.9 113 77.0
FAN14G2853 Fragaria x ananassa HOM05D001444 ORTHO05D003766 8.9e-43 177.9 113 77.0
Gohir.D11G283300 Gossypium hirsutum HOM05D001444 ORTHO05D003766 8.9e-43 177.9 115 77.4
Gorai.007G306200 Gossypium raimondii HOM05D001444 ORTHO05D003766 8.9e-43 177.9 115 77.4
MD04G1193200 Malus domestica HOM05D001444 ORTHO05D003766 8.9e-43 177.9 112 77.7
TPR.G2620 Trifolium pratense HOM05D001444 ORTHO05D003766 8.9e-43 177.9 113 77.9
arahy.Tifrunner.gnm1.ann1.06RU3W Arachis hypogaea HOM05D001444 ORTHO05D003766 1.2e-42 177.6 113 77.0
arahy.Tifrunner.gnm1.ann1.UJ98VB Arachis hypogaea HOM05D001444 ORTHO05D003766 1.2e-42 177.6 113 77.0
Migut.N01380 Erythranthe guttata HOM05D001444 ORTHO05D003766 1.2e-42 177.6 103 82.5
Gohir.A11G273200 Gossypium hirsutum HOM05D001444 ORTHO05D003766 1.2e-42 177.6 114 78.1
Nn4g25600 Nelumbo nucifera HOM05D001444 ORTHO05D003766 1.2e-42 177.6 113 77.0
ATR0796G182 Amborella trichopoda HOM05D001444 ORTHO05D003766 1.5e-42 177.2 113 76.1
Ca_10170_v3 Cicer arietinum L. HOM05D001444 ORTHO05D003766 1.5e-42 177.2 113 76.1
Sed0006327 Sechium edule HOM05D001444 ORTHO05D003766 1.5e-42 177.2 113 77.0
Solyc10g024320.2 Solanum lycopersicum HOM05D001444 ORTHO05D003766 2.0e-42 176.8 105 81.0
Sopen10g009280 Solanum pennellii HOM05D001444 ORTHO05D003766 2.0e-42 176.8 105 81.0
MSTRG.27942 Avicennia marina HOM05D001444 ORTHO05D003766 2.6e-42 176.4 103 81.6
CSS0031861 Camellia sinensis var. sinensis HOM05D001444 ORTHO05D003766 2.6e-42 176.4 103 83.5
FAN09G2106 Fragaria x ananassa HOM05D001444 ORTHO05D003766 2.6e-42 176.4 113 77.0
Gorai.004G236600 Gossypium raimondii HOM05D001444 ORTHO05D003766 3.4e-42 176.0 103 82.5
Psat0s3400g0080 Pisum sativum HOM05D001444 ORTHO05D003766 3.4e-42 176.0 113 76.1
BolC5t32653H Brassica oleracea HOM05D001444 ORTHO05D014980 4.4e-42 175.6 182 61.0
MELO3C004189.2 Cucumis melo HOM05D001444 ORTHO05D003766 4.4e-42 175.6 113 77.0
Duzib177G0746 Durio zibethinus HOM05D001444 ORTHO05D003766 4.4e-42 175.6 115 77.4
Gohir.D08G222800 Gossypium hirsutum HOM05D001444 ORTHO05D003766 4.4e-42 175.6 103 82.5
Phvul.007G201200 Phaseolus vulgaris HOM05D001444 ORTHO05D003766 4.4e-42 175.6 103 82.5
Actinidia01682 Actinidia chinensis HOM05D001444 ORTHO05D003766 5.8e-42 175.3 103 82.5
Gohir.A08G205900 Gossypium hirsutum HOM05D001444 ORTHO05D003766 7.5e-42 174.9 103 82.5
Oeu053708.1 Olea europaea HOM05D001444 ORTHO05D003766 7.5e-42 174.9 100 85.0
TAR636G1039 Trochodendron aralioides HOM05D001444 ORTHO05D003766 7.5e-42 174.9 113 76.1
BolC8t47133H Brassica oleracea HOM05D001444 ORTHO05D014980 9.8e-42 174.5 90 98.9
Cpa.g.sc48.159 Carica papaya HOM05D001444 ORTHO05D003766 9.8e-42 174.5 103 82.5
CDE05G1119 Ceratophyllum demersum HOM05D001444 ORTHO05D003766 9.8e-42 174.5 113 74.3
Lj5A334G51 Lonicera japonica HOM05D001444 ORTHO05D003766 1.3e-41 174.1 103 83.5
SalBow2G0724 Salvia bowleyana HOM05D001444 ORTHO05D003766 1.3e-41 174.1 102 81.4
Sc06g0005760 Simmondsia chinensis HOM05D001444 ORTHO05D003766 1.3e-41 174.1 99 84.8
Lsat_1_v5_gn_5_103920 Lactuca sativa HOM05D001444 ORTHO05D003766 1.7e-41 173.7 103 82.5
Lj5g0020416 Lotus japonicus HOM05D001444 ORTHO05D003766 1.7e-41 173.7 113 75.2
unitig_26.g9563 Utricularia gibba HOM05D001444 ORTHO05D003766 1.7e-41 173.7 106 78.3
CDE11G0937 Ceratophyllum demersum HOM05D001444 ORTHO05D003766 2.2e-41 173.3 113 73.5
Medtr1g084020 Medicago truncatula HOM05D001444 ORTHO05D003766 2.2e-41 173.3 113 75.2
PGR083G0370 Punica granatum HOM05D001444 ORTHO05D003766 2.2e-41 173.3 103 81.6
vmacro19754 Vaccinium macrocarpon HOM05D001444 ORTHO05D003766 2.2e-41 173.3 116 75.0
Zm00001eb331350 Zea mays HOM05D001444 ORTHO05D003766 2.2e-41 173.3 103 80.6
Duzib128G0547 Durio zibethinus HOM05D001444 ORTHO05D003766 2.9e-41 172.9 115 75.7
Lalb_Chr02g0147821 Lupinus albus HOM05D001444 ORTHO05D003766 3.7e-41 172.6 113 75.2
Lalb_Chr21g0310321 Lupinus albus HOM05D001444 ORTHO05D003766 3.7e-41 172.6 113 75.2
DCAR_005419 Daucus carota HOM05D001444 ORTHO05D003766 8.3e-41 171.4 109 76.1
DCAR_017356 Daucus carota HOM05D001444 ORTHO05D003766 8.3e-41 171.4 109 76.1
Aqoxy7G03321 Aquilegia oxysepala HOM05D001444 ORTHO05D003766 2.4e-40 169.9 100 83.0
Duzib106G0804 Durio zibethinus HOM05D001444 ORTHO05D003766 2.4e-40 169.9 129 70.5
Zm00001eb111810 Zea mays HOM05D001444 ORTHO05D003766 3.2e-40 169.5 103 81.6
Rhsim05G0131900 Rhododendron simsii HOM05D001444 ORTHO05D003766 5.4e-40 168.7 118 72.9
SHI18059 Sapria himalayana HOM05D001444 ORTHO05D003766 1.2e-39 167.5 113 71.7
ECA234G1965 Erigeron canadensis HOM05D001444 ORTHO05D003766 3.5e-39 166.0 112 75.9
COL.COLO4_05554 Corchorus olitorius HOM05D001444 ORTHO05D003766 1.3e-38 164.1 111 74.8
Dinv30892 Davidia involucrata HOM05D001444 ORTHO05D003766 2.3e-38 163.3 103 78.6
Eucgr.L00266 Eucalyptus grandis HOM05D001444 ORTHO05D003766 3.0e-38 162.9 102 78.4
AL3G16530 Arabidopsis lyrata HOM05D001444 ORTHO05D003766 8.6e-38 161.4 111 72.1
AT3G05790 Arabidopsis thaliana HOM05D001444 ORTHO05D003766 1.5e-37 160.6 105 75.2
Carub.0003s0515 Capsella rubella HOM05D001444 ORTHO05D003766 2.5e-37 159.8 103 74.8
RcHm_v2.0_Chr1g0325611 Rosa chinensis HOM05D001444 ORTHO05D003766 7.3e-37 158.3 104 75.0
RcHm_v2.0_Chr3g0457021 Rosa chinensis HOM05D001444 ORTHO05D003766 7.3e-37 158.3 113 71.7
PSO063G2884 Papaver somniferum HOM05D001444 ORTHO05D003766 1.6e-36 157.1 97 78.4
PSO782G1742 Papaver somniferum HOM05D001444 ORTHO05D003766 1.6e-36 157.1 97 78.4
Thhalv10022093m.g Eutrema salsugineum HOM05D001444 ORTHO05D003766 2.8e-36 156.4 103 73.8
HPP92_027566 Vanilla planifolia HOM05D001444 ORTHO05D003766 2.8e-36 156.4 113 67.3
BcaC09g47850 Brassica carinata HOM05D001444 ORTHO05D003766 4.7e-36 155.6 103 72.8
BolC1t05667H Brassica oleracea HOM05D001444 ORTHO05D003766 6.2e-36 155.2 115 67.0
Aa31LG11G9790 Aethionema arabicum HOM05D001444 ORTHO05D003766 2.3e-35 153.3 86 88.4
THA.LOC104820100 Tarenaya hassleriana HOM05D001444 ORTHO05D003766 3.1e-35 152.9 120 65.8
C09p52310 Brassica napus HOM05D001444 ORTHO05D014980 1.2e-34 151.0 167 58.7
BraA01t04474Z Brassica rapa HOM05D001444 ORTHO05D003766 1.2e-34 151.0 102 71.6
FAN03G3407 Fragaria x ananassa HOM05D001444 ORTHO05D003766 7.5e-34 148.3 112 66.1
CAN.G2431.1 Capsicum annuum HOM05D001444 ORTHO05D003766 1.3e-33 147.5 105 69.5
Haze_04062 Corylus avellana HOM05D001444 ORTHO05D003766 1.3e-33 147.5 113 67.3
FvH4_7g03300 Fragaria vesca HOM05D001444 ORTHO05D003766 1.3e-33 147.5 99 71.7
FAN06G0007 Fragaria x ananassa HOM05D001444 ORTHO05D003766 1.3e-33 147.5 99 71.7
TAR365G0568 Trochodendron aralioides HOM05D001444 ORTHO05D003766 2.2e-33 146.7 109 67.0
EL10Ac4g09446 Beta vulgaris HOM05D001444 ORTHO05D003766 4.1e-32 142.5 103 70.9
FAN10G3276 Fragaria x ananassa HOM05D001444 ORTHO05D003766 1.2e-31 141.0 99 69.7
A06p02720 Brassica napus HOM05D001444 ORTHO05D003766 3.5e-31 139.4 117 59.8
BraA06t23480Z Brassica rapa HOM05D001444 ORTHO05D003766 3.5e-31 139.4 117 59.8
AUR62000399 Chenopodium quinoa HOM05D001444 ORTHO05D003766 1.3e-30 137.5 100 72.0
AUR62006755 Chenopodium quinoa HOM05D001444 ORTHO05D003766 1.3e-30 137.5 100 72.0
Peaxi162Scf01208g00007 Petunia axillaris HOM05D001444 ORTHO05D003766 1.3e-30 137.5 105 64.8
Dinv24440 Davidia involucrata HOM05D001444 ORTHO05D003766 1.7e-30 137.1 121 58.7
Zm00001eb014570 Zea mays HOM05D001444 ORTHO05D003766 1.7e-30 137.1 100 66.0
CARHR080240 Cardamine hirsuta HOM05D001444 ORTHO05D003766 2.3e-30 136.7 134 54.5
BcaC08g43275 Brassica carinata HOM05D001444 ORTHO05D003766 3.0e-30 136.3 117 59.0
C06p06260 Brassica napus HOM05D001444 ORTHO05D003766 3.0e-30 136.3 117 59.0
BolC6t35735H Brassica oleracea HOM05D001444 ORTHO05D003766 3.0e-30 136.3 117 59.0
AL3G16520 Arabidopsis lyrata HOM05D001444 ORTHO05D003766 5.1e-30 135.6 120 60.8
Nitab4.5_0003894g0030 Nicotiana tabacum HOM05D001444 ORTHO05D003766 6.6e-30 135.2 105 64.8
Oeu064819.1 Olea europaea HOM05D001444 ORTHO05D003766 1.1e-29 134.4 77 84.4
AL845U10010 Arabidopsis lyrata HOM05D001444 ORTHO05D003766 3.3e-29 132.9 120 60.0
BcaC05g27912 Brassica carinata HOM05D001444 ORTHO05D003766 1.2e-28 131.0 68 98.5
AT3G05780 Arabidopsis thaliana HOM05D001444 ORTHO05D003766 2.8e-28 129.8 127 56.7
BcaC05g27911 Brassica carinata HOM05D010266 ORTHO05D014980 2.2e-25 120.2 62 95.2
QL03p013575 Quercus lobata HOM05D001444 ORTHO05D003766 2.9e-25 119.8 123 54.5
BcaB07g33548 Brassica carinata HOM05D001444 ORTHO05D003766 7.1e-24 115.2 189 41.8
EL10Ac1g02045 Beta vulgaris HOM05D000232 ORTHO05D000145 2.1e-23 113.6 68 77.9
MD07G1050000 Malus domestica HOM05D001444 ORTHO05D003766 2.3e-22 110.2 113 52.2
Ah.03g134540 Amaranthus hybridus HOM05D001444 ORTHO05D003766 5.6e-21 105.5 84 67.9
AagrBONN_evm.TU.Sc2ySwM_228.1077 Anthoceros agrestis HOM05D001444 ORTHO05D003766 2.8e-20 103.2 139 36.7
Pp3c13_13900 Physcomitrium patens HOM05D001444 ORTHO05D003766 4.7e-20 102.4 100 46.0
SEGI_11007 Sequoiadendron giganteum HOM05D001444 ORTHO05D003766 6.2e-20 102.1 62 79.0
SMO358G0399 Selaginella moellendorffii HOM05D001444 ORTHO05D003766 8.1e-20 101.7 102 51.0
CBR_g37235 Chara braunii HOM05D001444 ORTHO05D003766 1.8e-19 100.5 90 50.0
BolC6t35734H Brassica oleracea HOM05D001444 ORTHO05D003766 2.6e-18 96.7 81 63.0
Atru.chr2.221 Acer truncatum HOM05D001444 ORTHO05D003766 4.4e-18 95.9 55 85.5
A06p02730 Brassica napus HOM05D001444 ORTHO05D003766 5.4e-16 89.0 62 66.1
HPP92_017244 Vanilla planifolia HOM05D001444 ORTHO05D003766 6.0e-15 85.5 54 72.2
QL03p013604 Quercus lobata HOM05D001444 ORTHO05D003766 6.6e-14 82.0 130 44.6
QL03p039924 Quercus lobata HOM05D001444 ORTHO05D003766 1.1e-13 81.3 76 60.5
Mapoly0002s0303 Marchantia polymorpha HOM05D001444 ORTHO05D003766 1.9e-13 80.5 68 48.5
BcaB07g33551 Brassica carinata HOM05D001444 ORTHO05D003766 9.6e-13 78.2 121 43.0
Cre06.g281350 Chlamydomonas reinhardtii HOM05D001444 ORTHO05D003766 1.6e-12 77.4 95 40.0
C06p06230 Brassica napus HOM05D001444 ORTHO05D003766 2.1e-12 77.0 85 50.6
MCO16G463 Micromonas commoda HOM05D001444 ORTHO05D003766 4.9e-09 65.9 72 48.6
Atru.chr2.183 Acer truncatum HOM05D001444 ORTHO05D003766 2.4e-08 63.5 38 78.9
A06p08490 Brassica napus HOM05D010266 ORTHO05D096893 2.4e-08 63.5 76 55.3
C06p07320 Brassica napus HOM05D010266 ORTHO05D032946 7.1e-08 62.0 31 96.8
BolC6t35824H Brassica oleracea HOM05D010266 ORTHO05D032946 7.1e-08 62.0 31 96.8


User provided reference genes

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