Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p35760 Brassica napus HOM05D030884 ORTHO05D033117 2.5e-59 231.9 115 100.0
BolC9t56411H Brassica oleracea HOM05D030884 ORTHO05D033117 2.5e-59 231.9 115 100.0
A09p28230 Brassica napus HOM05D030884 ORTHO05D099984 4.9e-31 137.9 96 75.0
BcaB01g01576 Brassica carinata HOM05D000480 ORTHO05D000313 2.7e-13 79.0 52 75.0
BcaB05g22330 Brassica carinata HOM05D000480 ORTHO05D000313 6.1e-13 77.8 50 78.0
Thhalv10029125m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 3.0e-12 75.5 51 72.5
BcaC03g14172 Brassica carinata HOM05D000480 ORTHO05D000313 1.5e-11 73.2 51 76.5
C02p14460 Brassica napus HOM05D000480 ORTHO05D000313 1.5e-11 73.2 51 76.5
BolC2t07571H Brassica oleracea HOM05D000480 ORTHO05D000313 1.5e-11 73.2 51 76.5
Thhalv10029310m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 1.5e-11 73.2 51 70.6
BolC2t07569H Brassica oleracea HOM05D030884 ORTHO05D033117 3.3e-11 72.0 50 74.0
Thhalv10028682m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 2.2e-10 69.3 50 76.0
Thhalv10029246m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 4.8e-10 68.2 50 68.0
Thhalv10028610m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 1.4e-09 66.6 49 65.3
CARHR255620 Cardamine hirsuta HOM05D000480 ORTHO05D000313 2.4e-09 65.9 52 69.2
BcaC03g14171 Brassica carinata HOM05D000480 ORTHO05D000313 9.1e-09 63.9 45 73.3
BcaC03g16380 Brassica carinata HOM05D000480 ORTHO05D000313 2.2e-07 59.3 40 75.0
BcaC07g41900 Brassica carinata HOM05D000480 ORTHO05D000313 2.9e-07 58.9 36 77.8
A09p65550 Brassica napus HOM05D000480 ORTHO05D000313 2.9e-07 58.9 36 77.8
C08p49550 Brassica napus HOM05D000480 ORTHO05D000313 2.9e-07 58.9 36 77.8
C08p49600 Brassica napus HOM05D000480 ORTHO05D000313 2.9e-07 58.9 36 77.8
BraA09t41900Z Brassica rapa HOM05D000480 ORTHO05D000313 2.9e-07 58.9 36 77.8
BcaC07g41899 Brassica carinata HOM05D000480 ORTHO05D000313 3.8e-07 58.5 86 45.3
BolC8t52491H Brassica oleracea HOM05D000480 ORTHO05D000313 8.5e-07 57.4 36 75.0
BcaNung00129 Brassica carinata HOM05D000480 ORTHO05D000313 2.5e-06 55.8 46 63.0
BcaNung03735 Brassica carinata HOM05D000480 ORTHO05D000313 7.2e-06 54.3 37 73.0
BraA09t36340Z Brassica rapa HOM05D000480 ORTHO05D000313 7.2e-06 54.3 37 75.7


User provided reference genes

Program Settings