Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21131 Brassica carinata HOM05D055503 ORTHO05D039414 6.9e-102 374.0 194 100.0
C09p35210 Brassica napus HOM05D055503 ORTHO05D039414 6.9e-102 374.0 194 100.0
BcaC03g17093 Brassica carinata HOM05D000296 ORTHO05D000175 7.8e-13 78.2 168 44.0
BcaC08g44848 Brassica carinata HOM05D000848 ORTHO05D021665 2.1e-10 70.1 71 53.5
C06p24560 Brassica napus HOM05D000848 ORTHO05D021665 6.2e-10 68.6 55 56.4
BolC6t37603H Brassica oleracea HOM05D000848 ORTHO05D021665 6.2e-10 68.6 55 56.4
A07p10430 Brassica napus HOM05D000848 ORTHO05D011438 1.8e-09 67.0 45 64.4
BraA03t10164Z Brassica rapa HOM05D000848 ORTHO05D011438 1.8e-09 67.0 45 64.4
BraA08t33188Z Brassica rapa HOM05D000848 ORTHO05D011438 1.8e-09 67.0 45 64.4
C02p55550 Brassica napus HOM05D000848 ORTHO05D011438 5.3e-09 65.5 45 64.4
BolC2t11612H Brassica oleracea HOM05D000848 ORTHO05D003342 5.3e-09 65.5 45 64.4
BolC3t20476H Brassica oleracea HOM05D000848 ORTHO05D003342 5.3e-09 65.5 47 61.7
BcaC05g28556 Brassica carinata HOM05D000395 ORTHO05D000088 6.9e-09 65.1 54 57.4
BolC8t51083H Brassica oleracea HOM05D000848 ORTHO05D003342 1.2e-08 64.3 57 54.4
BcaB01g02189 Brassica carinata HOM05D009056 ORTHO05D011508 1.5e-08 63.9 102 41.2
C08p47240 Brassica napus HOM05D004958 ORTHO05D005983 2.0e-08 63.5 69 55.1
BolC5t30476H Brassica oleracea HOM05D000848 ORTHO05D021747 3.4e-08 62.8 81 44.4
C03p07760 Brassica napus HOM05D000848 ORTHO05D011438 4.5e-08 62.4 70 47.1
C02p47330 Brassica napus HOM05D000848 ORTHO05D018649 7.6e-08 61.6 60 51.7
BolC3t18271H Brassica oleracea HOM05D000848 ORTHO05D022013 7.6e-08 61.6 65 49.2
BolC9t53065H Brassica oleracea HOM05D000848 ORTHO05D018552 7.6e-08 61.6 132 34.8
BraA03t13211Z Brassica rapa HOM05D000848 ORTHO05D022013 2.9e-07 59.7 63 47.6
C06p21550 Brassica napus HOM05D000848 ORTHO05D022013 3.8e-07 59.3 65 46.2
C04p12480 Brassica napus HOM05D000848 ORTHO05D018552 4.9e-07 58.9 132 34.8
C05p18240 Brassica napus HOM05D000848 ORTHO05D027490 4.9e-07 58.9 140 37.9
BolC3t18183H Brassica oleracea HOM05D000848 ORTHO05D021665 4.9e-07 58.9 131 38.9
BolC4t22896H Brassica oleracea HOM05D000848 ORTHO05D018552 4.9e-07 58.9 132 34.8
A04p29750 Brassica napus HOM05D000848 ORTHO05D022013 1.4e-06 57.4 166 30.7
C03p91130 Brassica napus HOM05D000848 ORTHO05D027299 2.4e-06 56.6 57 50.9
BolC5t29801H Brassica oleracea HOM05D000848 ORTHO05D018552 2.4e-06 56.6 34 67.6
C08p44850 Brassica napus HOM05D000848 ORTHO05D027490 3.2e-06 56.2 140 37.1
BolC8t52031H Brassica oleracea HOM05D000848 ORTHO05D027490 3.2e-06 56.2 140 37.1
BcaC01g02864 Brassica carinata HOM05D000848 ORTHO05D021665 7.1e-06 55.1 137 36.5
A03p40530 Brassica napus HOM05D000848 ORTHO05D022013 7.1e-06 55.1 166 30.1
BcaB02g06790 Brassica carinata HOM05D000380 ORTHO05D000561 9.3e-06 54.7 113 36.3
BcaC05g24406 Brassica carinata HOM05D000848 ORTHO05D023963 9.3e-06 54.7 69 44.9
C05p03590 Brassica napus HOM05D000848 ORTHO05D023963 9.3e-06 54.7 69 44.9


User provided reference genes

Program Settings