Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p34130 Brassica napus HOM05D000063 ORTHO05D097053 2.6e-121 438.7 224 100.0
BcaC06g31935 Brassica carinata HOM05D000063 ORTHO05D005936 4.2e-42 175.6 194 55.7
Sp2g01490 Schrenkiella parvula HOM05D000063 ORTHO05D005936 7.9e-41 171.4 204 53.9
Thhalv10023324m.g Eutrema salsugineum HOM05D000063 ORTHO05D005936 2.4e-37 159.8 200 50.5
BcaC04g22720 Brassica carinata HOM05D000063 ORTHO05D005936 1.3e-35 154.1 197 49.2
BolC9t54505H Brassica oleracea HOM05D000063 ORTHO05D005936 1.3e-35 154.1 197 49.2
BraA09t36992Z Brassica rapa HOM05D000063 ORTHO05D005936 6.4e-35 151.8 203 50.2
A09p13450 Brassica napus HOM05D000063 ORTHO05D005936 1.4e-34 150.6 194 50.0
AL2G12430 Arabidopsis lyrata HOM05D000063 ORTHO05D005936 2.1e-33 146.7 198 50.0
C09p15940 Brassica napus HOM05D000063 ORTHO05D005936 2.3e-32 143.3 195 48.2
A09p15690 Brassica napus HOM05D000063 ORTHO05D005936 1.9e-31 140.2 212 45.3
BraA09t37210Z Brassica rapa HOM05D000063 ORTHO05D005936 1.9e-31 140.2 212 45.3
BcaC04g22471 Brassica carinata HOM05D000063 ORTHO05D005936 6.2e-30 135.2 202 46.0
C09p18920 Brassica napus HOM05D000063 ORTHO05D005936 1.8e-29 133.7 201 46.3
BolC9t54794H Brassica oleracea HOM05D000063 ORTHO05D005936 2.4e-29 133.3 202 45.5
CARHR048410 Cardamine hirsuta HOM05D000063 ORTHO05D005936 4.5e-28 129.0 245 42.4
BcaB07g31382 Brassica carinata HOM05D000063 ORTHO05D005936 4.9e-27 125.6 150 54.7
AT1G63100 Arabidopsis thaliana HOM05D000063 ORTHO05D005936 1.4e-26 124.0 208 45.2
Aa31LG2G570 Aethionema arabicum HOM05D000063 ORTHO05D005936 1.2e-25 120.9 211 42.2
THA.LOC104818192 Tarenaya hassleriana HOM05D000063 ORTHO05D005936 6.3e-22 108.6 209 40.2
Carub.0002s0188 Capsella rubella HOM05D000063 ORTHO05D005936 3.4e-20 102.8 200 42.0
Thecc.03G272000 Theobroma cacao HOM05D000063 ORTHO05D005936 1.8e-16 90.5 243 36.2
THA.LOC104809421 Tarenaya hassleriana HOM05D000063 ORTHO05D005936 3.9e-16 89.4 203 39.4
Duzib084G1369 Durio zibethinus HOM05D000063 ORTHO05D005936 6.7e-16 88.6 216 38.0
Haze_08942 Corylus avellana HOM05D000063 ORTHO05D005936 8.7e-16 88.2 218 36.2
Cfa012109 Carpinus fangiana HOM05D000063 ORTHO05D005936 1.1e-15 87.8 218 35.8
Potri.001G109400 Populus trichocarpa HOM05D000063 ORTHO05D005936 2.5e-15 86.7 216 37.0
Manes.01G066400 Manihot esculenta HOM05D000063 ORTHO05D005936 9.7e-15 84.7 207 38.2
Duzib205G0765 Durio zibethinus HOM05D000063 ORTHO05D005936 2.2e-14 83.6 245 35.1
COL.COLO4_05265 Corchorus olitorius HOM05D000063 ORTHO05D005936 8.2e-14 81.6 264 33.7
Sabra01G0082700 Salix brachista HOM05D000063 ORTHO05D005936 5.3e-13 79.0 216 36.1
Eucgr.D01917 Eucalyptus grandis HOM05D000063 ORTHO05D005936 6.9e-13 78.6 215 34.9
Gohir.A12G225300 Gossypium hirsutum HOM05D000063 ORTHO05D005936 2.0e-12 77.0 216 37.0
Gohir.D12G227900 Gossypium hirsutum HOM05D000063 ORTHO05D005936 2.0e-12 77.0 216 37.0
Gorai.008G243900 Gossypium raimondii HOM05D000063 ORTHO05D005936 2.0e-12 77.0 216 37.0
TPR.G19218 Trifolium pratense HOM05D000950 ORTHO05D000774 2.6e-12 76.6 221 32.6
Duzib068G1247 Durio zibethinus HOM05D000063 ORTHO05D005936 4.5e-12 75.9 246 34.1
Atru.chr9.1546 Acer truncatum HOM05D000063 ORTHO05D005936 5.9e-12 75.5 217 33.6
QL12p017405 Quercus lobata HOM05D000063 ORTHO05D005936 5.9e-12 75.5 266 31.2
CiPaw.12G097700 Carya illinoinensis HOM05D000063 ORTHO05D005936 7.7e-12 75.1 231 32.9
Prupe.5G091700 Prunus persica HOM05D000063 ORTHO05D005936 7.7e-12 75.1 235 31.9
Ciclev10019186m.g Citrus clementina HOM05D000063 ORTHO05D005936 1.3e-11 74.3 254 31.9
PGR031G3024 Punica granatum HOM05D000063 ORTHO05D005936 1.3e-11 74.3 235 33.2
Cpa.g.sc74.80 Carica papaya HOM05D000063 ORTHO05D005936 2.2e-11 73.6 199 36.2
CiPaw.11G140700 Carya illinoinensis HOM05D000063 ORTHO05D005936 2.9e-11 73.2 231 33.8
Cc08_g14050 Coffea canephora HOM05D000063 ORTHO05D005936 8.5e-11 71.6 256 30.9
MD06G1073500 Malus domestica HOM05D000063 ORTHO05D005936 1.4e-10 70.9 218 33.0
Sabra03G0086300 Salix brachista HOM05D000063 ORTHO05D005936 1.9e-10 70.5 216 34.3
CAN.G981.25 Capsicum annuum HOM05D000063 ORTHO05D005936 4.2e-10 69.3 254 30.7
Manes.02G027000 Manihot esculenta HOM05D000063 ORTHO05D005936 4.2e-10 69.3 217 33.6
PGSC0003DMG400003047 Solanum tuberosum HOM05D000063 ORTHO05D005936 4.2e-10 69.3 253 29.6
Potri.003G122400 Populus trichocarpa HOM05D000063 ORTHO05D005936 5.5e-10 68.9 215 34.9
Sopen08g028730 Solanum pennellii HOM05D000063 ORTHO05D005936 7.2e-10 68.6 253 29.6
CANSAT21G1887 Cannabis sativa HOM05D000063 ORTHO05D005936 9.4e-10 68.2 223 34.1
Dinv39005 Davidia involucrata HOM05D000063 ORTHO05D005936 1.2e-09 67.8 193 32.6
GSVIVG01019809001 Vitis vinifera HOM05D000063 ORTHO05D005936 1.6e-09 67.4 192 34.4
Hma1.2p1_0514F.1_g170050 Hydrangea macrophylla HOM05D000063 ORTHO05D005936 3.6e-09 66.2 214 31.8
TWI15G0440 Tripterygium wilfordii HOM05D000063 ORTHO05D005936 7.9e-09 65.1 222 30.6
TAR629G3205 Trochodendron aralioides HOM05D000063 ORTHO05D005936 1.0e-08 64.7 219 31.1
MD04G1066800 Malus domestica HOM05D000063 ORTHO05D005936 1.4e-08 64.3 218 32.6
Lalb_Chr05g0225041 Lupinus albus HOM05D000063 ORTHO05D005936 1.8e-08 63.9 242 31.4
Peaxi162Scf00714g00058 Petunia axillaris HOM05D000063 ORTHO05D005936 1.8e-08 63.9 223 31.4
TWI60G0986 Tripterygium wilfordii HOM05D000063 ORTHO05D005936 3.0e-08 63.2 221 31.2
Sc22g0000250 Simmondsia chinensis HOM05D000063 ORTHO05D005936 6.7e-08 62.0 161 34.8
MSTRG.1891 Avicennia marina HOM05D000063 ORTHO05D005936 2.6e-07 60.1 252 29.4
DCAR_008419 Daucus carota HOM05D000063 ORTHO05D005936 3.3e-07 59.7 206 31.1
Hma1.2p1_0371F.1_g138110 Hydrangea macrophylla HOM05D000063 ORTHO05D005936 5.7e-07 58.9 165 31.5
Actinidia27406 Actinidia chinensis HOM05D000063 ORTHO05D005936 1.7e-06 57.4 88 43.2
Oeu059064.1 Olea europaea HOM05D000063 ORTHO05D005936 3.7e-06 56.2 241 27.8
Nitab4.5_0002853g0080 Nicotiana tabacum HOM05D000063 ORTHO05D005936 6.3e-06 55.5 219 32.0


User provided reference genes

Program Settings