Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 1.2e-76 290.0 171 100.0
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 1.2e-76 290.0 171 100.0
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 1.2e-76 290.0 171 100.0
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 4.4e-68 261.5 169 93.5
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 4.4e-68 261.5 169 93.5
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 4.1e-66 255.0 169 79.9
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 7.8e-57 224.2 169 72.8
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 1.9e-55 219.5 169 76.3
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 2.5e-55 219.2 169 69.8
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 2.1e-54 216.1 169 79.3
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 6.8e-53 211.1 169 76.3
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 2.6e-52 209.1 169 70.4
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 2.1e-46 189.5 169 62.1
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 8.1e-46 187.6 169 74.0
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 3.6e-38 162.2 169 59.8
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 2.0e-36 156.4 169 54.4
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 2.2e-35 152.9 167 48.5
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 1.4e-34 150.2 169 56.2
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 4.2e-34 148.7 167 47.9
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 5.4e-34 148.3 167 46.7
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 9.3e-34 147.5 162 48.1
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.2e-33 147.1 169 46.7
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 4.6e-33 145.2 162 53.1
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 4.6e-33 145.2 167 47.9
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.0e-32 144.1 169 46.2
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 1.0e-32 144.1 167 46.7
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 1.0e-32 144.1 167 46.7
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 1.7e-32 143.3 169 46.2
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 5.1e-32 141.7 170 47.1
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 5.1e-32 141.7 167 45.5
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 1.5e-31 140.2 168 45.8
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 1.9e-31 139.8 169 45.6
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 1.9e-31 139.8 167 49.7
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 2.5e-31 139.4 167 45.5
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 2.5e-31 139.4 162 56.8
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 7.3e-31 137.9 167 43.1
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 9.6e-31 137.5 169 45.0
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 2.8e-30 136.0 162 44.4
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.1e-29 134.0 170 45.9
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 1.1e-29 134.0 167 44.3
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 1.4e-29 133.7 167 52.1
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.4e-29 132.9 182 42.3
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 4.0e-29 132.1 167 52.7
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 1.3e-27 127.1 162 45.1
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 3.2e-26 122.5 167 39.5
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 4.2e-26 122.1 169 49.7
Aa31LG8G5380 Aethionema arabicum HOM05D007696 ORTHO05D009719 5.4e-26 121.7 141 50.4
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 7.1e-26 121.3 167 40.1
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 7.1e-26 121.3 170 38.2
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.6e-25 120.2 196 47.4
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 1.6e-25 120.2 169 39.1
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 2.1e-25 119.8 162 43.8
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 1.0e-24 117.5 167 41.3
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 1.0e-24 117.5 97 82.5
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 1.8e-24 116.7 169 47.3
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 2.3e-24 116.3 162 37.7
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 3.9e-24 115.5 169 45.6
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 5.1e-24 115.2 167 39.5
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 5.1e-24 115.2 167 38.9
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 8.7e-24 114.4 161 50.3
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 2.5e-23 112.8 162 40.1
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 3.3e-23 112.5 167 39.5
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 2.8e-22 109.4 169 46.7
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 4.8e-22 108.6 169 47.3
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 1.8e-21 106.7 169 47.3
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 3.1e-21 105.9 162 45.7
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 5.3e-21 105.1 169 35.5
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 7.6e-20 101.3 106 50.9
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 1.4e-18 97.1 169 36.7
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 2.7e-17 92.8 147 37.4
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 1.8e-16 90.1 173 37.6
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 3.0e-16 89.4 261 34.1
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 3.9e-16 89.0 165 37.0
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 1.9e-15 86.7 110 48.2
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 9.6e-15 84.3 204 37.7
AL2G14840 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 1.8e-13 80.1 60 70.0
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 6.9e-13 78.2 161 31.7
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 2.0e-12 76.6 106 43.4
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 5.8e-12 75.1 161 35.4
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 7.6e-12 74.7 93 43.0
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.0e-11 74.3 75 50.7
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.0e-11 74.3 75 50.7
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 1.9e-10 70.1 74 56.8
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 2.5e-10 69.7 101 38.6
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 1.2e-09 67.4 90 40.0


User provided reference genes

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