Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p34070 Brassica napus HOM05D009590 ORTHO05D020087 1.7e-114 416.0 205 100.0
BolC9t56243H Brassica oleracea HOM05D009590 ORTHO05D020087 1.7e-114 416.0 205 100.0
BcaNung03499 Brassica carinata HOM05D009590 ORTHO05D020087 3.4e-75 285.4 257 61.5
BolC2t07403H Brassica oleracea HOM05D009590 ORTHO05D014118 9.3e-57 224.2 220 56.4
C04p12300 Brassica napus HOM05D009590 ORTHO05D014118 3.9e-55 218.8 249 49.0
BolC1t03303H Brassica oleracea HOM05D009590 ORTHO05D014118 4.8e-45 185.3 238 45.4
C01p30030 Brassica napus HOM05D009590 ORTHO05D042627 2.7e-40 169.5 273 42.5
BolC1t02943H Brassica oleracea HOM05D009590 ORTHO05D042627 2.7e-40 169.5 273 42.5
BolC4t22876H Brassica oleracea HOM05D009590 ORTHO05D020087 2.3e-39 166.4 142 57.7
BraA01t02897Z Brassica rapa HOM05D009590 ORTHO05D020087 2.8e-37 159.5 188 48.9
A01p27580 Brassica napus HOM05D009590 ORTHO05D020087 9.4e-33 144.4 134 58.2
C03p10840 Brassica napus HOM05D009590 ORTHO05D100504 1.6e-27 127.1 263 36.9
C01p33570 Brassica napus HOM05D009590 ORTHO05D020087 5.0e-26 122.1 106 54.7
C04p26320 Brassica napus HOM05D009590 ORTHO05D042950 5.2e-23 112.1 212 38.2
BolC4t24175H Brassica oleracea HOM05D009590 ORTHO05D042950 5.2e-23 112.1 212 38.2
BcaB07g32585 Brassica carinata HOM05D009590 ORTHO05D014118 2.1e-16 90.1 81 61.7
BolC4t22877H Brassica oleracea HOM05D009590 ORTHO05D014118 4.1e-12 75.9 78 53.8
BcaC06g36732 Brassica carinata HOM05D009590 ORTHO05D014118 1.3e-10 70.9 39 89.7
BcaC02g10657 Brassica carinata HOM05D009590 ORTHO05D014118 2.3e-10 70.1 40 85.0
A01p27590 Brassica napus HOM05D009590 ORTHO05D014118 3.3e-09 66.2 39 79.5
BraA01t02898Z Brassica rapa HOM05D009590 ORTHO05D014118 3.3e-09 66.2 39 79.5
Sp1g39000 Schrenkiella parvula HOM05D009590 ORTHO05D372274 1.2e-08 64.3 66 53.0
Sp6g09970 Schrenkiella parvula HOM05D009590 ORTHO05D014118 4.0e-07 59.3 72 47.2
BcaB05g23366 Brassica carinata HOM05D009117 ORTHO05D012204 1.2e-06 57.8 87 41.4
A07p43380 Brassica napus HOM05D009117 ORTHO05D024074 1.2e-06 57.8 226 29.6
Sp5g15830 Schrenkiella parvula HOM05D001959 ORTHO05D001955 1.2e-06 57.8 37 73.0
BcaB05g23704 Brassica carinata HOM05D009117 ORTHO05D012204 2.0e-06 57.0 76 44.7


User provided reference genes

Program Settings