Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p32880 Brassica napus HOM05D001170 ORTHO05D096542 1.7e-41 172.2 83 100.0
BcaC04g21350 Brassica carinata HOM05D001170 ORTHO05D006602 3.2e-08 61.6 30 93.3
A09p25960 Brassica napus HOM05D001170 ORTHO05D006602 3.2e-08 61.6 30 93.3
C09p32900 Brassica napus HOM05D001170 ORTHO05D006602 3.2e-08 61.6 30 93.3
BolC9t56125H Brassica oleracea HOM05D001170 ORTHO05D006602 3.2e-08 61.6 30 93.3
BraA09t38163Z Brassica rapa HOM05D001170 ORTHO05D006602 3.2e-08 61.6 30 93.3
A09p25950 Brassica napus HOM05D001170 ORTHO05D021581 9.4e-08 60.1 30 90.0
BcaC09g51498 Brassica carinata HOM05D001170 ORTHO05D006602 1.2e-07 59.7 30 86.7
A03p30250 Brassica napus HOM05D001170 ORTHO05D006602 1.2e-07 59.7 30 86.7
C03p36500 Brassica napus HOM05D001170 ORTHO05D006602 1.2e-07 59.7 30 86.7
BolC3t15963H Brassica oleracea HOM05D001170 ORTHO05D006602 1.2e-07 59.7 30 86.7
BraA03t12209Z Brassica rapa HOM05D001170 ORTHO05D006602 1.2e-07 59.7 30 86.7
BcaB01g01849 Brassica carinata HOM05D001170 ORTHO05D006602 2.7e-07 58.5 30 83.3
Thhalv10028614m.g Eutrema salsugineum HOM05D001170 ORTHO05D006602 2.7e-07 58.5 30 83.3
Sp6g04010 Schrenkiella parvula HOM05D001170 ORTHO05D006602 2.7e-07 58.5 30 83.3
THA.LOC104812862 Tarenaya hassleriana HOM05D001170 ORTHO05D006602 1.0e-06 56.6 30 76.7
THA.LOC104806287 Tarenaya hassleriana HOM05D001170 ORTHO05D006602 1.4e-06 56.2 30 76.7
CARHR252590 Cardamine hirsuta HOM05D001170 ORTHO05D006602 1.8e-06 55.8 30 80.0
AT4G32580 Arabidopsis thaliana HOM05D001170 ORTHO05D006602 2.3e-06 55.5 30 76.7
Aa31LG9G9540 Aethionema arabicum HOM05D001170 ORTHO05D006602 3.0e-06 55.1 30 76.7
TWI38G1016 Tripterygium wilfordii HOM05D001170 ORTHO05D006602 4.0e-06 54.7 30 73.3
TWI38G1622 Tripterygium wilfordii HOM05D001170 ORTHO05D006602 5.2e-06 54.3 30 73.3
BcaB01g05292 Brassica carinata HOM05D001170 ORTHO05D021581 6.8e-06 53.9 30 80.0
BcaC02g08216 Brassica carinata HOM05D001170 ORTHO05D021581 6.8e-06 53.9 30 80.0
BolC3t13557H Brassica oleracea HOM05D000177 ORTHO05D021581 6.8e-06 53.9 30 80.0
Carub.0006s3288 Capsella rubella HOM05D001170 ORTHO05D006602 8.8e-06 53.5 30 73.3


User provided reference genes

Program Settings