Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p32120 Brassica napus HOM05D000347 ORTHO05D039084 1.9e-74 282.7 180 100.0
BcaC04g21409 Brassica carinata HOM05D000347 ORTHO05D039084 1.3e-38 163.7 99 85.9
BcaB07g30247 Brassica carinata HOM05D000347 ORTHO05D000694 2.6e-10 69.7 41 80.5
THA.LOC104815259 Tarenaya hassleriana HOM05D000347 ORTHO05D000694 3.4e-10 69.3 43 81.4
Aa31LG2G6410 Aethionema arabicum HOM05D000347 ORTHO05D000694 5.8e-10 68.6 36 88.9
A06p42370 Brassica napus HOM05D000347 ORTHO05D000694 5.8e-10 68.6 36 88.9
BraA06t27152Z Brassica rapa HOM05D000347 ORTHO05D000694 5.8e-10 68.6 36 88.9
Sp2g15150 Schrenkiella parvula HOM05D000347 ORTHO05D000694 5.8e-10 68.6 36 88.9
Carub.0005s0377 Capsella rubella HOM05D000347 ORTHO05D000694 9.8e-10 67.8 36 86.1
BcaC06g31104 Brassica carinata HOM05D000347 ORTHO05D000694 2.2e-09 66.6 35 88.6
BcaC06g33938 Brassica carinata HOM05D000347 ORTHO05D000694 2.2e-09 66.6 35 88.6
C07p34970 Brassica napus HOM05D000347 ORTHO05D000694 2.2e-09 66.6 35 88.6
BolC7t44029H Brassica oleracea HOM05D000347 ORTHO05D000694 2.2e-09 66.6 35 88.6
CARHR146900 Cardamine hirsuta HOM05D000347 ORTHO05D000694 2.2e-09 66.6 36 83.3
AL5G14570 Arabidopsis lyrata HOM05D000347 ORTHO05D000694 3.7e-09 65.9 36 83.3
Thhalv10004489m.g Eutrema salsugineum HOM05D000347 ORTHO05D000694 3.7e-09 65.9 36 83.3
AT3G25910 Arabidopsis thaliana HOM05D000347 ORTHO05D000694 4.9e-09 65.5 36 86.1
BcaC03g17306 Brassica carinata HOM05D000347 ORTHO05D000694 6.4e-09 65.1 36 86.1
A02p34190 Brassica napus HOM05D000347 ORTHO05D000694 6.4e-09 65.1 36 86.1
C02p52540 Brassica napus HOM05D000347 ORTHO05D000694 6.4e-09 65.1 36 86.1
BolC2t11330H Brassica oleracea HOM05D000347 ORTHO05D000694 6.4e-09 65.1 36 86.1
BraA02t08433Z Brassica rapa HOM05D000347 ORTHO05D000694 6.4e-09 65.1 36 86.1
Gohir.A05G018600 Gossypium hirsutum HOM05D000347 ORTHO05D000694 1.4e-08 63.9 37 81.1
Gohir.A08G239400 Gossypium hirsutum HOM05D000347 ORTHO05D000694 1.4e-08 63.9 37 81.1
Gohir.D05G019700 Gossypium hirsutum HOM05D000347 ORTHO05D000694 1.4e-08 63.9 40 77.5
Gohir.D08G260100 Gossypium hirsutum HOM05D000347 ORTHO05D000694 1.4e-08 63.9 37 81.1
Gorai.004G278000 Gossypium raimondii HOM05D000347 ORTHO05D000694 1.4e-08 63.9 37 81.1
Gorai.009G019900 Gossypium raimondii HOM05D000347 ORTHO05D000694 1.4e-08 63.9 40 77.5
TWI63G0693 Tripterygium wilfordii HOM05D000347 ORTHO05D000694 1.4e-08 63.9 33 90.9
Sabra18G0061600 Salix brachista HOM05D000347 ORTHO05D000694 1.9e-08 63.5 51 64.7
Cpa.g.sc75.73 Carica papaya HOM05D000347 ORTHO05D000694 3.2e-08 62.8 40 77.5
CiPaw.03G240600 Carya illinoinensis HOM05D000347 ORTHO05D000694 3.2e-08 62.8 33 87.9
Haze_25632 Corylus avellana HOM05D000347 ORTHO05D000694 3.2e-08 62.8 33 87.9
Potri.018G070500 Populus trichocarpa HOM05D000347 ORTHO05D000694 3.2e-08 62.8 33 87.9
COL.COLO4_35186 Corchorus olitorius HOM05D000347 ORTHO05D000694 4.1e-08 62.4 36 83.3
Lj4g0013008 Lotus japonicus HOM05D000347 ORTHO05D000694 4.1e-08 62.4 38 76.3
Sc18g0000760 Simmondsia chinensis HOM05D000347 ORTHO05D000694 4.1e-08 62.4 38 76.3
Thecc.09G121700 Theobroma cacao HOM05D000347 ORTHO05D000694 4.1e-08 62.4 40 75.0
Duzib168G0688 Durio zibethinus HOM05D000347 ORTHO05D000694 5.4e-08 62.0 40 75.0
GSVIVG01015493001 Vitis vinifera HOM05D000347 ORTHO05D000694 5.4e-08 62.0 33 84.8
Rhsim01G0077400 Rhododendron simsii HOM05D000347 ORTHO05D000694 9.2e-08 61.2 44 65.9
Potri.006G154300 Populus trichocarpa HOM05D000347 ORTHO05D000694 1.2e-07 60.8 33 84.8
TAR636G2285 Trochodendron aralioides HOM05D000347 ORTHO05D000694 1.2e-07 60.8 33 84.8
Ah.09g225660 Amaranthus hybridus HOM05D000347 ORTHO05D000694 1.6e-07 60.5 36 77.8
CANSAT11G2525 Cannabis sativa HOM05D000347 ORTHO05D000694 1.6e-07 60.5 42 64.3
Atru.chr7.1227 Acer truncatum HOM05D000347 ORTHO05D000694 2.0e-07 60.1 33 81.8
EL10Ac8g18602 Beta vulgaris HOM05D000347 ORTHO05D000694 2.0e-07 60.1 33 84.8
AUR62011078 Chenopodium quinoa HOM05D000347 ORTHO05D000694 2.0e-07 60.1 32 87.5
AUR62033461 Chenopodium quinoa HOM05D000347 ORTHO05D000694 2.0e-07 60.1 32 87.5
PGR102G3084 Punica granatum HOM05D000347 ORTHO05D000694 2.0e-07 60.1 39 79.5
QL02p087497 Quercus lobata HOM05D000347 ORTHO05D000694 2.0e-07 60.1 33 81.8
Sc08g0006780 Simmondsia chinensis HOM05D000347 ORTHO05D000694 2.0e-07 60.1 33 84.8
vmacro20656 Vaccinium macrocarpon HOM05D000347 ORTHO05D000694 2.0e-07 60.1 44 63.6
CSS0026756 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D000694 2.7e-07 59.7 33 81.8
Dinv36563 Davidia involucrata HOM05D000347 ORTHO05D000694 2.7e-07 59.7 33 81.8
Dinv41539 Davidia involucrata HOM05D000347 ORTHO05D000694 2.7e-07 59.7 33 81.8
Actinidia26408 Actinidia chinensis HOM05D000347 ORTHO05D000694 3.5e-07 59.3 33 81.8
ClCG06G010870 Citrullus lanatus HOM05D000347 ORTHO05D000694 3.5e-07 59.3 33 81.8
Ciclev10008839m.g Citrus clementina HOM05D000347 ORTHO05D000694 3.5e-07 59.3 33 81.8
MELO3C026640.2 Cucumis melo HOM05D000347 ORTHO05D000694 3.5e-07 59.3 33 81.8
CsaV3_1G029780 Cucumis sativus L. HOM05D000347 ORTHO05D000694 3.5e-07 59.3 33 81.8
DCAR_017840 Daucus carota HOM05D000347 ORTHO05D000694 3.5e-07 59.3 33 81.8
ECA240G1704 Erigeron canadensis HOM05D000347 ORTHO05D000694 3.5e-07 59.3 33 81.8
Sed0004928 Sechium edule HOM05D000347 ORTHO05D000694 3.5e-07 59.3 33 81.8
Hund09150 Selenicereus undatus HOM05D000347 ORTHO05D000694 3.5e-07 59.3 33 84.8
Actinidia28189 Actinidia chinensis HOM05D000347 ORTHO05D000694 4.6e-07 58.9 33 78.8
Actinidia40449 Actinidia chinensis HOM05D000347 ORTHO05D000694 4.6e-07 58.9 33 78.8
CAN.G377.32 Capsicum annuum HOM05D000347 ORTHO05D000694 4.6e-07 58.9 36 77.8
Glyma.11G222000 Glycine max HOM05D000347 ORTHO05D000694 4.6e-07 58.9 33 81.8
Glyma.18G035500 Glycine max HOM05D000347 ORTHO05D000694 4.6e-07 58.9 33 81.8
RcHm_v2.0_Chr2g0089221 Rosa chinensis HOM05D000347 ORTHO05D000694 4.6e-07 58.9 37 75.7
Sed0018104 Sechium edule HOM05D000347 ORTHO05D000694 4.6e-07 58.9 33 81.8
MBI04_g10417_MAGBIO Magnolia biondii HOM05D000347 ORTHO05D000694 6.0e-07 58.5 33 81.8
HPP92_005304 Vanilla planifolia HOM05D000347 ORTHO05D000694 6.0e-07 58.5 36 69.4
CSS0019738 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D000694 7.8e-07 58.2 33 78.8
CDE06G2255 Ceratophyllum demersum HOM05D000347 ORTHO05D000694 7.8e-07 58.2 38 71.1
Duzib150G0999 Durio zibethinus HOM05D000347 ORTHO05D000694 7.8e-07 58.2 40 72.5
Migut.K00467 Erythranthe guttata HOM05D000347 ORTHO05D000694 7.8e-07 58.2 88 42.0
Eucgr.C04174 Eucalyptus grandis HOM05D000347 ORTHO05D000694 7.8e-07 58.2 32 78.1
Lalb_Chr07g0178751 Lupinus albus HOM05D000347 ORTHO05D000694 7.8e-07 58.2 37 73.0
Lalb_Chr13g0302031 Lupinus albus HOM05D000347 ORTHO05D000694 7.8e-07 58.2 33 78.8
Solyc12g006700.3 Solanum lycopersicum HOM05D000347 ORTHO05D000694 7.8e-07 58.2 31 87.1
Sopen12g002650 Solanum pennellii HOM05D000347 ORTHO05D000694 7.8e-07 58.2 31 87.1
PGSC0003DMG400020683 Solanum tuberosum HOM05D000347 ORTHO05D000694 7.8e-07 58.2 31 87.1
TPR.G10708 Trifolium pratense HOM05D000347 ORTHO05D000694 7.8e-07 58.2 40 72.5
Ca_21703_v3 Cicer arietinum L. HOM05D000347 ORTHO05D000694 1.0e-06 57.8 33 78.8
Cc06_g08870 Coffea canephora HOM05D000347 ORTHO05D000694 1.0e-06 57.8 33 78.8
Hma1.2p1_0018F.1_g012740 Hydrangea macrophylla HOM05D000347 ORTHO05D000694 1.0e-06 57.8 33 78.8
Medtr4g113730 Medicago truncatula HOM05D000347 ORTHO05D000694 1.0e-06 57.8 33 78.8
Phvul.001G235500 Phaseolus vulgaris HOM05D000347 ORTHO05D000694 1.0e-06 57.8 33 78.8
Psat4g039920 Pisum sativum HOM05D000347 ORTHO05D000694 1.0e-06 57.8 33 78.8
VMungo1383G0074 Vigna mungo HOM05D000347 ORTHO05D000694 1.0e-06 57.8 33 78.8
Nn8g39376 Nelumbo nucifera HOM05D000347 ORTHO05D000694 1.3e-06 57.4 38 71.1
Nitab4.5_0001164g0020 Nicotiana tabacum HOM05D000347 ORTHO05D000694 1.3e-06 57.4 33 78.8
Nitab4.5_0005520g0040 Nicotiana tabacum HOM05D000347 ORTHO05D000694 1.3e-06 57.4 33 78.8
Oeu021591.1 Olea europaea HOM05D000347 ORTHO05D000694 1.3e-06 57.4 32 81.2
CDE07G2022 Ceratophyllum demersum HOM05D000347 ORTHO05D000694 1.7e-06 57.0 38 68.4
FvH4_1g03830 Fragaria vesca HOM05D000347 ORTHO05D000694 2.3e-06 56.6 33 78.8
HanXRQChr06g0180211 Helianthus annuus HOM05D000347 ORTHO05D000694 2.3e-06 56.6 33 75.8
Lsat_1_v5_gn_8_57341 Lactuca sativa HOM05D000347 ORTHO05D000694 2.3e-06 56.6 41 63.4
Peaxi162Scf00984g00210 Petunia axillaris HOM05D000347 ORTHO05D000694 2.3e-06 56.6 31 83.9
Prupe.7G238700 Prunus persica HOM05D000347 ORTHO05D000694 2.3e-06 56.6 33 78.8
TAR383G0871 Trochodendron aralioides HOM05D000347 ORTHO05D000694 2.3e-06 56.6 86 44.2
Hma1.2p1_0665F.1_g199230 Hydrangea macrophylla HOM05D000347 ORTHO05D000694 3.0e-06 56.2 33 75.8
Ah.14g080740 Amaranthus hybridus HOM05D000347 ORTHO05D000694 3.9e-06 55.8 31 83.9
MBI01_g11879_MAGBIO Magnolia biondii HOM05D000347 ORTHO05D000694 5.0e-06 55.5 32 81.2
DCAR_009205 Daucus carota HOM05D000347 ORTHO05D000694 6.6e-06 55.1 33 72.7
Manes.14G129500 Manihot esculenta HOM05D000347 ORTHO05D000694 6.6e-06 55.1 33 72.7
Oeu018457.1 Olea europaea HOM05D000347 ORTHO05D000694 6.6e-06 55.1 33 75.8
MD15G1176800 Malus domestica HOM05D000347 ORTHO05D000694 8.6e-06 54.7 33 75.8


User provided reference genes

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