Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 1.6e-98 362.8 190 100.0
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 3.8e-97 358.2 190 97.9
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 1.2e-79 300.1 194 83.0
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 2.1e-79 299.3 190 84.7
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 1.8e-78 296.2 194 83.0
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 3.2e-75 285.4 195 80.0
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 7.1e-75 284.3 194 77.3
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 9.2e-75 283.9 195 80.0
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 1.2e-74 283.5 194 77.8
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 1.0e-73 280.4 194 77.3
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 1.0e-73 280.4 194 78.4
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 1.7e-73 279.6 194 77.3
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 1.7e-73 279.6 194 77.3
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 6.6e-73 277.7 195 75.9
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 6.6e-73 277.7 195 75.9
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 8.4e-68 260.8 200 71.5
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 2.4e-67 259.2 196 73.0
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 1.6e-58 229.9 199 64.8
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 3.1e-46 189.1 201 54.7
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 2.0e-45 186.4 200 53.0
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 9.9e-45 184.1 193 50.8
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 2.2e-44 183.0 191 51.3
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 2.2e-44 183.0 191 51.3
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 6.4e-44 181.4 193 50.3
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 6.4e-44 181.4 201 49.8
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 1.1e-43 180.6 195 51.8
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 1.9e-43 179.9 194 52.1
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 1.9e-43 179.9 203 51.7
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 7.1e-43 177.9 197 50.3
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 7.1e-43 177.9 196 51.0
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 7.1e-43 177.9 185 52.4
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 9.3e-43 177.6 183 55.2
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.7e-42 176.0 202 48.0
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 2.7e-42 176.0 201 48.8
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 3.5e-42 175.6 194 50.5
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 3.5e-42 175.6 200 50.5
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 4.6e-42 175.3 200 50.5
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 6.0e-42 174.9 201 51.7
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 6.0e-42 174.9 200 50.5
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 7.9e-42 174.5 183 51.4
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 7.9e-42 174.5 200 50.5
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 7.9e-42 174.5 192 52.1
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 1.0e-41 174.1 200 49.5
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 3.9e-41 172.2 197 50.8
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 3.9e-41 172.2 197 50.8
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 8.7e-41 171.0 201 48.8
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 1.1e-40 170.6 200 49.5
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 1.1e-40 170.6 200 47.5
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 1.1e-40 170.6 200 49.0
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 1.1e-40 170.6 192 49.0
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 1.5e-40 170.2 199 48.7
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 3.3e-40 169.1 171 52.6
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 5.6e-40 168.3 198 46.0
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 5.6e-40 168.3 194 49.0
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 7.4e-40 167.9 192 50.5
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 1.3e-39 167.2 200 48.5
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 1.3e-39 167.2 200 49.0
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 1.3e-39 167.2 197 47.7
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 2.1e-39 166.4 183 51.9
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 2.1e-39 166.4 199 49.2
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 6.2e-39 164.9 199 49.7
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 1.8e-38 163.3 193 45.1
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 2.4e-38 162.9 198 50.0
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 2.4e-38 162.9 199 49.2
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 2.4e-38 162.9 199 49.2
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 2.4e-38 162.9 200 44.5
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 9.0e-38 161.0 198 49.5
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 9.0e-38 161.0 201 46.3
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 1.2e-37 160.6 187 48.7
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 2.0e-37 159.8 165 51.5
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 2.6e-37 159.5 192 46.9
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 2.6e-37 159.5 193 45.6
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 7.6e-37 157.9 194 46.9
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 1.0e-36 157.5 194 45.9
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 1.0e-36 157.5 200 46.0
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 1.3e-36 157.1 192 50.0
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 4.9e-36 155.2 196 45.4
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 6.5e-36 154.8 166 50.6
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 1.1e-35 154.1 203 45.3
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 9.3e-35 151.0 197 44.7
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 9.3e-35 151.0 197 44.7
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 3.5e-34 149.1 168 47.6
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 3.9e-33 145.6 156 50.0
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 5.1e-33 145.2 195 47.2
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 6.7e-33 144.8 160 50.6
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 8.7e-33 144.4 193 44.0
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 2.8e-31 139.4 141 51.8
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 1.8e-30 136.7 175 47.4
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 1.3e-28 130.6 190 38.4
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 2.2e-28 129.8 195 41.5
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 7.2e-27 124.8 192 40.6
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 1.2e-26 124.0 156 42.3
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 1.2e-26 124.0 196 42.3
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 3.5e-26 122.5 178 39.3
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 6.1e-26 121.7 190 39.5
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 6.1e-26 121.7 190 39.5
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 3.9e-25 119.0 158 44.9
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 6.7e-25 118.2 192 38.5
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 8.7e-25 117.9 192 38.0
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 1.5e-24 117.1 157 39.5
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 5.7e-24 115.2 156 40.4
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.8e-22 110.2 195 35.4
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 9.0e-22 107.8 123 46.3
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 2.0e-21 106.7 147 42.2
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 2.6e-21 106.3 159 35.8
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 2.5e-19 99.8 114 45.6
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 3.2e-19 99.4 162 37.0
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 3.6e-18 95.9 166 38.6
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 2.5e-16 89.7 83 53.0
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 9.7e-16 87.8 157 37.6
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 1.4e-14 84.0 174 33.3
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 2.0e-13 80.1 144 34.0
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 5.9e-13 78.6 103 43.7
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 1.0e-12 77.8 75 48.0
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 5.7e-08 62.0 41 65.9
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 5.7e-08 62.0 165 30.9
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 7.4e-08 61.6 101 34.7


User provided reference genes

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