Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p31780 Brassica napus HOM05D000142 ORTHO05D097858 3.1e-34 147.9 74 100.0
BcaC04g21440 Brassica carinata HOM05D000142 ORTHO05D027080 4.2e-23 110.9 54 100.0
C09p31730 Brassica napus HOM05D000142 ORTHO05D027080 4.2e-23 110.9 54 100.0
BolC9t56028H Brassica oleracea HOM05D000142 ORTHO05D027080 4.2e-23 110.9 54 100.0
BolC9t56035H Brassica oleracea HOM05D000142 ORTHO05D027080 4.2e-23 110.9 54 100.0
BcaC04g21437 Brassica carinata HOM05D000142 ORTHO05D008707 7.8e-22 106.7 56 92.9
Thhalv10023650m.g Eutrema salsugineum HOM05D000142 ORTHO05D008707 5.1e-13 77.4 54 68.5
AL2G16690 Arabidopsis lyrata HOM05D000142 ORTHO05D008707 6.7e-13 77.0 55 70.9
Carub.0002s0524 Capsella rubella HOM05D000142 ORTHO05D008707 5.6e-12 73.9 51 64.7
BcaB07g31197 Brassica carinata HOM05D000142 ORTHO05D008707 7.4e-12 73.6 47 70.2
AT1G60000 Arabidopsis thaliana HOM05D000142 ORTHO05D008707 2.1e-11 72.0 56 64.3
Sp2g04580 Schrenkiella parvula HOM05D000142 ORTHO05D008707 8.1e-11 70.1 45 71.1
A09p17750 Brassica napus HOM05D000142 ORTHO05D008707 2.4e-10 68.6 48 70.8
C09p22100 Brassica napus HOM05D000142 ORTHO05D008707 2.4e-10 68.6 48 70.8
BolC9t55123H Brassica oleracea HOM05D000142 ORTHO05D008707 2.4e-10 68.6 48 70.8
BcaC04g22208 Brassica carinata HOM05D000142 ORTHO05D008707 2.0e-09 65.5 48 64.6
Aa31LG2G10220 Aethionema arabicum HOM05D000142 ORTHO05D008707 2.6e-09 65.1 49 65.3
BraA09t37407Z Brassica rapa HOM05D000142 ORTHO05D008707 2.6e-09 65.1 43 72.1
CARHR052980 Cardamine hirsuta HOM05D000142 ORTHO05D008707 2.6e-09 65.1 55 65.5
Cc03_g06360 Coffea canephora HOM05D000142 ORTHO05D008707 1.6e-06 55.8 54 50.0
Lj6g0019999 Lotus japonicus HOM05D000142 ORTHO05D008707 6.0e-06 53.9 50 44.0
CDE11G0470 Ceratophyllum demersum HOM05D000142 ORTHO05D008707 7.9e-06 53.5 49 51.0
Ciclev10005487m.g Citrus clementina HOM05D000142 ORTHO05D008707 7.9e-06 53.5 37 62.2


User provided reference genes

Program Settings