Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p31720 Brassica napus HOM05D007901 ORTHO05D024420 7.3e-155 550.4 263 100.0
C09p31750 Brassica napus HOM05D007901 ORTHO05D024420 7.3e-155 550.4 263 100.0
BolC9t56032H Brassica oleracea HOM05D007901 ORTHO05D024420 7.3e-155 550.4 263 100.0
BcaC04g21443 Brassica carinata HOM05D007901 ORTHO05D024420 7.6e-152 540.4 263 98.5
BolC9t56027H Brassica oleracea HOM05D007901 ORTHO05D024420 2.5e-147 525.4 250 100.0
BcaC04g21438 Brassica carinata HOM05D007901 ORTHO05D095300 2.3e-116 422.5 203 98.5
BolC1t03653H Brassica oleracea HOM05D007901 ORTHO05D010902 7.3e-38 161.8 232 40.1
C01p36710 Brassica napus HOM05D007901 ORTHO05D010902 8.1e-37 158.3 232 39.2
BolC1t03631H Brassica oleracea HOM05D007901 ORTHO05D010902 8.1e-37 158.3 232 39.2
BraA01t03004Z Brassica rapa HOM05D007901 ORTHO05D010902 2.4e-36 156.8 232 37.9
A01p28980 Brassica napus HOM05D007901 ORTHO05D010902 4.0e-36 156.0 249 36.5
A01p29180 Brassica napus HOM05D007901 ORTHO05D010902 4.0e-36 156.0 232 37.9
BcaC09g49444 Brassica carinata HOM05D007901 ORTHO05D010902 3.4e-35 152.9 227 38.8
BcaB04g20243 Brassica carinata HOM05D007901 ORTHO05D010902 1.7e-34 150.6 225 40.4
CARHR052680 Cardamine hirsuta HOM05D007901 ORTHO05D010902 8.4e-34 148.3 230 38.7
AT1G60300 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 2.4e-33 146.7 225 36.9
AT1G60280 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 7.1e-33 145.2 229 39.7
BcaB04g20261 Brassica carinata HOM05D007901 ORTHO05D010902 9.2e-33 144.8 231 39.8
AL2G16360 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 1.6e-32 144.1 228 39.9
AL2G16320 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 4.6e-32 142.5 227 38.8
Carub.0002s0498 Capsella rubella HOM05D007901 ORTHO05D010902 1.3e-31 141.0 235 40.0
C01p36960 Brassica napus HOM05D007901 ORTHO05D010902 3.0e-31 139.8 227 37.0
AT1G60380 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 1.1e-30 137.9 223 35.9
Sp2g04430 Schrenkiella parvula HOM05D007901 ORTHO05D010902 1.9e-30 137.1 228 38.6
AT1G60350 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 5.6e-30 135.6 226 36.3
Carub.0170s0002 Capsella rubella HOM05D007901 ORTHO05D010902 9.6e-30 134.8 225 36.9
AL2G16330 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 1.6e-29 134.0 226 36.7
AL2G16550 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 1.8e-28 130.6 225 34.7
BcaC09g49416 Brassica carinata HOM05D007901 ORTHO05D010902 5.2e-28 129.0 155 43.2
BraA01t02977Z Brassica rapa HOM05D007901 ORTHO05D010902 5.2e-28 129.0 185 37.8
C09p46950 Brassica napus HOM05D007901 ORTHO05D010902 1.5e-27 127.5 236 36.4
BolC9t57581H Brassica oleracea HOM05D007901 ORTHO05D010902 1.5e-27 127.5 236 36.4
BcaB08g35962 Brassica carinata HOM05D007901 ORTHO05D010902 4.4e-27 125.9 264 34.8
C09p47250 Brassica napus HOM05D007901 ORTHO05D010902 4.4e-27 125.9 236 36.9
Carub.0002s0497 Capsella rubella HOM05D007901 ORTHO05D010902 1.7e-26 124.0 228 34.2
BcaC04g20178 Brassica carinata HOM05D007901 ORTHO05D010902 1.1e-25 121.3 232 35.8
BolC9t57543H Brassica oleracea HOM05D007901 ORTHO05D010902 7.1e-25 118.6 232 35.3
A10p13320 Brassica napus HOM05D007901 ORTHO05D010902 3.5e-24 116.3 232 35.3
A10p13180 Brassica napus HOM05D007901 ORTHO05D010902 1.3e-23 114.4 238 33.2
BraA10t43415Z Brassica rapa HOM05D007901 ORTHO05D010902 1.3e-23 114.4 238 33.2
BraA10t43433Z Brassica rapa HOM05D007901 ORTHO05D010902 2.3e-23 113.6 234 35.0
A10p13190 Brassica napus HOM05D007901 ORTHO05D010902 3.0e-23 113.2 234 34.6
Carub.0002s0495 Capsella rubella HOM05D007901 ORTHO05D010902 3.0e-23 113.2 228 32.9
Sp2g04350 Schrenkiella parvula HOM05D007901 ORTHO05D010902 3.0e-23 113.2 206 35.4
BraA10t43416Z Brassica rapa HOM05D007901 ORTHO05D010902 3.9e-23 112.8 234 34.2
Carub.0170s0003 Capsella rubella HOM05D007901 ORTHO05D010902 5.1e-23 112.5 225 35.6
AT1G60340 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 3.3e-22 109.8 189 34.9
BcaC04g20143 Brassica carinata HOM05D007901 ORTHO05D010902 1.7e-18 97.4 153 39.2
AL2G16340 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 1.8e-15 87.4 226 29.6
BcaB04g20260 Brassica carinata HOM05D007901 ORTHO05D016734 1.6e-13 80.9 243 30.0
BcaC02g10635 Brassica carinata HOM05D007901 ORTHO05D016734 1.8e-12 77.4 248 30.6
C04p26040 Brassica napus HOM05D007901 ORTHO05D016734 1.8e-12 77.4 248 30.6
BolC4t24201H Brassica oleracea HOM05D007901 ORTHO05D016734 1.8e-12 77.4 248 30.6
BcaC06g31810 Brassica carinata HOM05D007901 ORTHO05D092289 1.5e-06 57.8 81 42.0


User provided reference genes

Program Settings