Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p30990 Brassica napus HOM05D000171 ORTHO05D000101 3.2e-141 505.0 241 100.0
BraA09t38010Z Brassica rapa HOM05D000171 ORTHO05D000101 1.4e-88 330.1 239 69.5
A09p24100 Brassica napus HOM05D000171 ORTHO05D000101 5.1e-62 241.9 286 50.0
BcaB02g10701 Brassica carinata HOM05D000171 ORTHO05D000101 1.7e-57 226.9 218 51.8
Carub.0005s1335 Capsella rubella HOM05D000171 ORTHO05D000101 2.1e-55 219.9 287 42.2
AT3G47140 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.3e-53 212.6 234 48.7
AT3G47130 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 7.9e-47 191.4 283 40.3
Thhalv10010959m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.3e-46 190.7 220 48.2
AL5G26410 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.3e-45 186.0 286 39.5
AL5G26390 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.8e-44 182.2 207 47.3
Thhalv10010928m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.3e-44 181.8 288 41.0
BcaB07g30685 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-42 177.6 177 53.7
Thhalv10011107m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.6e-42 176.4 221 47.1
Thhalv10011099m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.5e-42 175.6 288 37.8
Thhalv10011008m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.9e-41 172.9 275 38.9
CARHR155840 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.1e-39 165.2 220 41.8
AL5G25950 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.0e-38 164.5 220 44.1
CARHR155790 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.7e-34 148.3 212 38.7
CARHR155810 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.3e-30 136.7 218 36.2
Thhalv10011084m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.1e-23 113.6 252 35.3
AT3G47150 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.8e-22 110.5 219 34.7
AL4G20430 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 2.3e-22 110.2 284 29.2
AL5G25940 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.0e-18 97.1 80 55.0
CARHR155780 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.2e-17 93.6 245 29.4
CARHR155800 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.2e-16 88.6 56 66.1
BcaC01g06476 Brassica carinata HOM05D000171 ORTHO05D000101 1.4e-14 84.3 56 67.9
BolC3t13927H Brassica oleracea HOM05D000171 ORTHO05D000101 1.4e-14 84.3 221 31.2
CARHR150880 Cardamine hirsuta HOM05D000171 ORTHO05D000101 8.8e-14 81.6 180 32.8
CARHR168020 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.5e-09 65.5 206 25.2
CARHR155830 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.9e-08 63.9 50 52.0
Carub.0006s1026 Capsella rubella HOM05D000171 ORTHO05D000101 9.4e-08 61.6 76 46.1
CARHR253630 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.2e-07 61.2 201 23.9
AL1G44400 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.6e-07 60.8 91 38.5
BcaC06g31875 Brassica carinata HOM05D000171 ORTHO05D000101 1.6e-07 60.8 76 35.5
CARHR201470 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.6e-07 60.8 76 42.1
BraA03t10579Z Brassica rapa HOM05D000171 ORTHO05D000101 3.6e-07 59.7 106 38.7
AL6G22480 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.0e-07 58.5 74 43.2
BcaC02g10524 Brassica carinata HOM05D000171 ORTHO05D000101 8.0e-07 58.5 76 34.2
AL6G22600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.0e-06 58.2 74 43.2
A02p02780 Brassica napus HOM05D000171 ORTHO05D000101 1.4e-06 57.8 84 36.9
BraA02t05249Z Brassica rapa HOM05D000171 ORTHO05D000101 1.8e-06 57.4 84 35.7
THA.LOC104799108 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 1.8e-06 57.4 83 36.1
AL5G23680 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.0e-06 56.2 213 27.7
BcaB01g00375 Brassica carinata HOM05D000171 ORTHO05D000101 5.2e-06 55.8 71 35.2
AL8G27960 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.8e-06 55.5 74 35.1
BcaNung03087 Brassica carinata HOM05D000171 ORTHO05D000101 8.8e-06 55.1 84 35.7
BolC7t45568H Brassica oleracea HOM05D000171 ORTHO05D000101 8.8e-06 55.1 72 37.5
Carub.0001s2069 Capsella rubella HOM05D000171 ORTHO05D000101 8.8e-06 55.1 84 34.5


User provided reference genes

Program Settings