Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p29170 Brassica napus HOM05D001445 ORTHO05D001261 1.2e-95 353.2 181 100.0
BcaC04g21667 Brassica carinata HOM05D001445 ORTHO05D001261 1.3e-94 349.7 181 98.9
BolC9t55774H Brassica oleracea HOM05D001445 ORTHO05D001261 3.8e-94 348.2 181 98.3
A09p22680 Brassica napus HOM05D001445 ORTHO05D001261 1.6e-92 342.8 181 95.6
BraA09t37873Z Brassica rapa HOM05D001445 ORTHO05D001261 7.9e-92 340.5 181 95.0
BcaB07g30804 Brassica carinata HOM05D001445 ORTHO05D001261 8.2e-89 330.5 181 91.7
Thhalv10001100m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 4.4e-42 175.3 178 53.9
Sp2g11720 Schrenkiella parvula HOM05D001445 ORTHO05D001261 4.9e-41 171.8 178 52.8
C02p48090 Brassica napus HOM05D001445 ORTHO05D001261 3.1e-35 152.5 178 48.9
BolC2t10840H Brassica oleracea HOM05D001445 ORTHO05D001261 3.1e-35 152.5 178 48.9
A02p30500 Brassica napus HOM05D001445 ORTHO05D001261 5.2e-35 151.8 178 48.9
BraA02t08068Z Brassica rapa HOM05D001445 ORTHO05D001261 5.2e-35 151.8 178 48.9
BcaC03g16906 Brassica carinata HOM05D001445 ORTHO05D001261 5.4e-32 141.7 168 48.2
AL8G11340 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 4.6e-31 138.7 181 45.9
Carub.0008s0092 Capsella rubella HOM05D001445 ORTHO05D001261 7.8e-31 137.9 177 45.8
A06p45450 Brassica napus HOM05D001445 ORTHO05D001261 1.0e-30 137.5 182 45.6
BcaC06g31431 Brassica carinata HOM05D001445 ORTHO05D001261 1.7e-30 136.7 181 43.6
BcaC06g34307 Brassica carinata HOM05D001445 ORTHO05D001261 6.6e-30 134.8 182 44.5
BraA06t27413Z Brassica rapa HOM05D001445 ORTHO05D001261 1.5e-29 133.7 182 44.5
C07p30520 Brassica napus HOM05D001445 ORTHO05D001261 2.5e-29 132.9 182 44.0
BolC7t43593H Brassica oleracea HOM05D001445 ORTHO05D001261 2.5e-29 132.9 182 44.0
AT5G46930 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 7.3e-29 131.3 181 43.6
Carub.0008s0089 Capsella rubella HOM05D001445 ORTHO05D001261 4.7e-28 128.6 178 43.3
Sp2g11760 Schrenkiella parvula HOM05D001445 ORTHO05D001261 8.0e-28 127.9 178 42.7
Carub.0008s0091 Capsella rubella HOM05D001445 ORTHO05D001261 1.4e-27 127.1 179 41.9
AL8G11330 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 1.8e-27 126.7 178 43.3
AL8G11310 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 3.1e-27 125.9 178 42.1
CARHR174500 Cardamine hirsuta HOM05D001445 ORTHO05D001261 9.8e-26 120.9 178 40.4
AT5G46940 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 2.9e-25 119.4 178 41.6
BcaB07g30808 Brassica carinata HOM05D001445 ORTHO05D001261 9.2e-24 114.4 177 39.0
Carub.0008s0090 Capsella rubella HOM05D001445 ORTHO05D001261 1.3e-22 110.5 177 39.5
BcaC03g16913 Brassica carinata HOM05D001445 ORTHO05D001261 6.6e-22 108.2 177 38.4
C02p48150 Brassica napus HOM05D001445 ORTHO05D001261 6.6e-22 108.2 177 38.4
BolC2t10847H Brassica oleracea HOM05D001445 ORTHO05D001261 6.6e-22 108.2 177 38.4
BolC3t18500H Brassica oleracea HOM05D001445 ORTHO05D001261 6.6e-22 108.2 177 37.3
BolC2t10846H Brassica oleracea HOM05D001445 ORTHO05D001261 1.5e-21 107.1 177 37.9
Sp2g11740 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.5e-21 107.1 177 37.9
BcaC03g16912 Brassica carinata HOM05D001445 ORTHO05D001261 1.9e-21 106.7 177 37.9
C02p48140 Brassica napus HOM05D001445 ORTHO05D001261 1.9e-21 106.7 177 37.9
A02p30180 Brassica napus HOM05D001445 ORTHO05D001261 2.5e-21 106.3 177 37.3
A02p30590 Brassica napus HOM05D001445 ORTHO05D001261 2.5e-21 106.3 177 37.9
C03p62420 Brassica napus HOM05D001445 ORTHO05D001261 2.5e-21 106.3 177 36.7
Thhalv10001105m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 4.3e-21 105.5 177 37.9
Thhalv10001199m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 7.3e-21 104.8 177 38.4
AT5G46970 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 2.8e-20 102.8 163 39.3
BraA02t08034Z Brassica rapa HOM05D001445 ORTHO05D001261 2.8e-20 102.8 177 36.2
A02p30560 Brassica napus HOM05D001445 ORTHO05D001261 1.1e-19 100.9 177 37.9
A02p30580 Brassica napus HOM05D001445 ORTHO05D001261 1.1e-19 100.9 179 36.9
Sp2g11730 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.8e-19 100.1 177 36.2
BcaC01g02648 Brassica carinata HOM05D001445 ORTHO05D001261 3.1e-19 99.4 167 37.7
C02p47650 Brassica napus HOM05D001445 ORTHO05D001261 4.0e-19 99.0 176 34.7
BolC2t10801H Brassica oleracea HOM05D001445 ORTHO05D001261 4.0e-19 99.0 176 34.7
BraA02t08076Z Brassica rapa HOM05D001445 ORTHO05D001261 4.0e-19 99.0 179 36.3
BraA02t08078Z Brassica rapa HOM05D001445 ORTHO05D001261 4.0e-19 99.0 177 38.4
Sp2g11750 Schrenkiella parvula HOM05D001445 ORTHO05D001261 6.8e-19 98.2 176 36.9
BraA02t08073Z Brassica rapa HOM05D001445 ORTHO05D001261 1.5e-18 97.1 179 37.4
CARHR174490 Cardamine hirsuta HOM05D001445 ORTHO05D001261 2.6e-18 96.3 178 32.6
BcaC03g16868 Brassica carinata HOM05D001445 ORTHO05D001261 3.4e-18 95.9 176 34.1
AL8G11320 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 2.9e-17 92.8 177 34.5
CARHR174480 Cardamine hirsuta HOM05D001445 ORTHO05D001261 3.2e-16 89.4 146 39.0
A06p45680 Brassica napus HOM05D001445 ORTHO05D001261 9.2e-16 87.8 178 32.6
BraA06t27437Z Brassica rapa HOM05D001445 ORTHO05D001261 1.6e-15 87.0 178 32.6
BcaB08g36203 Brassica carinata HOM05D001445 ORTHO05D001261 2.1e-15 86.7 177 35.0
Aa31sc241G40 Aethionema arabicum HOM05D001445 ORTHO05D001261 6.6e-14 81.6 179 33.5
BcaB01g05448 Brassica carinata HOM05D001445 ORTHO05D001261 1.1e-13 80.9 181 33.7
BcaC06g31448 Brassica carinata HOM05D001445 ORTHO05D001261 1.1e-13 80.9 181 32.0
AT5G46950 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 1.9e-13 80.1 177 32.8
Aa31sc241G60 Aethionema arabicum HOM05D001445 ORTHO05D001261 3.3e-13 79.3 179 33.0
Aa31LG9G5990 Aethionema arabicum HOM05D001445 ORTHO05D001261 2.1e-12 76.6 179 31.8
AT5G46960 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 3.6e-12 75.9 177 32.2
Sp2g11770 Schrenkiella parvula HOM05D008727 ORTHO05D011379 3.6e-12 75.9 177 30.5
Sp2g11790 Schrenkiella parvula HOM05D008727 ORTHO05D001261 3.6e-12 75.9 177 32.8
Thecc.03G235500 Theobroma cacao HOM05D001445 ORTHO05D001261 3.6e-12 75.9 167 28.7
Gohir.D03G169433 Gossypium hirsutum HOM05D001445 ORTHO05D001261 6.2e-12 75.1 169 27.2
Gorai.003G179700 Gossypium raimondii HOM05D001445 ORTHO05D001261 6.2e-12 75.1 169 27.2
AL1G65050 Arabidopsis lyrata HOM05D008727 ORTHO05D011379 4.0e-11 72.4 177 31.1
Sp2g11780 Schrenkiella parvula HOM05D008727 ORTHO05D001261 6.8e-11 71.6 180 30.0
BraA09t37874Z Brassica rapa HOM05D001445 ORTHO05D001261 7.6e-10 68.2 106 40.6
AT5G46980 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 9.9e-10 67.8 177 29.4
A02p30600 Brassica napus HOM05D001445 ORTHO05D001261 9.9e-10 67.8 79 51.9
BolC9t55775H Brassica oleracea HOM05D001445 ORTHO05D001261 1.3e-09 67.4 106 41.5
Thhalv10001202m.g Eutrema salsugineum HOM05D008727 ORTHO05D001261 1.3e-09 67.4 181 29.3
PSO478G4988 Papaver somniferum HOM05D001445 ORTHO05D001261 1.3e-09 67.4 171 30.4
Sc07g0008920 Simmondsia chinensis HOM05D001445 ORTHO05D001261 2.2e-09 66.6 160 30.0
A09p22690 Brassica napus HOM05D001445 ORTHO05D001261 2.9e-09 66.2 74 52.7
Duzib084G0977 Durio zibethinus HOM05D001445 ORTHO05D001261 3.8e-09 65.9 167 26.3
BcaC04g21666 Brassica carinata HOM05D001445 ORTHO05D001261 4.9e-09 65.5 154 33.1
RcHm_v2.0_Chr7g0207981 Rosa chinensis HOM05D001445 ORTHO05D001261 6.4e-09 65.1 178 27.0
RcHm_v2.0_Chr7g0207991 Rosa chinensis HOM05D001445 ORTHO05D001261 6.4e-09 65.1 173 28.3
AT1G54620 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 1.1e-08 64.3 177 28.8
Potri.003G086500 Populus trichocarpa HOM05D001445 ORTHO05D001261 1.1e-08 64.3 154 29.9
PSO478G2336 Papaver somniferum HOM05D001445 ORTHO05D001261 1.9e-08 63.5 171 29.8
Sc07g0008930 Simmondsia chinensis HOM05D001445 ORTHO05D001261 4.2e-08 62.4 159 25.8
AT5G46990 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 5.4e-08 62.0 177 27.7
C09p29180 Brassica napus HOM05D001445 ORTHO05D001261 7.1e-08 61.6 106 40.6
Cpa.g.sc52.68 Carica papaya HOM05D001445 ORTHO05D001261 9.3e-08 61.2 162 27.2
FvH4_5g20930 Fragaria vesca HOM05D001445 ORTHO05D001261 9.3e-08 61.2 177 27.1
FAN08G3072 Fragaria x ananassa HOM05D001445 ORTHO05D001261 9.3e-08 61.2 159 27.7
FAN18G2178 Fragaria x ananassa HOM05D001445 ORTHO05D001261 9.3e-08 61.2 159 27.7
Duzib205G0415 Durio zibethinus HOM05D001445 ORTHO05D001261 1.6e-07 60.5 173 25.4
Cpa.g.sc52.69 Carica papaya HOM05D001445 ORTHO05D001261 4.6e-07 58.9 152 25.7
Sed0025391 Sechium edule HOM05D001445 ORTHO05D001261 4.6e-07 58.9 182 26.9
VMungo0251G1280 Vigna mungo HOM05D001445 ORTHO05D001261 4.6e-07 58.9 185 25.4
Carub.0008s0084 Capsella rubella HOM05D008727 ORTHO05D011379 7.8e-07 58.2 179 27.4
Medtr8g009300 Medicago truncatula HOM05D001445 ORTHO05D001261 7.8e-07 58.2 182 25.8
PSO782G4131 Papaver somniferum HOM05D001445 ORTHO05D001261 7.8e-07 58.2 167 27.5
FAN13G3027 Fragaria x ananassa HOM05D001445 ORTHO05D001261 1.0e-06 57.8 165 27.3
Gorai.001G141600 Gossypium raimondii HOM05D001445 ORTHO05D001261 1.0e-06 57.8 180 25.0
C07p30610 Brassica napus HOM05D008727 ORTHO05D011379 1.3e-06 57.4 182 28.6
BolC7t43601H Brassica oleracea HOM05D008727 ORTHO05D011379 1.3e-06 57.4 182 28.6
FvH4_5g20940 Fragaria vesca HOM05D001445 ORTHO05D001261 1.3e-06 57.4 172 26.7
FAN08G1111 Fragaria x ananassa HOM05D001445 ORTHO05D001261 1.3e-06 57.4 158 27.2
FAN18G4149 Fragaria x ananassa HOM05D001445 ORTHO05D001261 1.3e-06 57.4 158 27.2
Gohir.D07G130800 Gossypium hirsutum HOM05D001445 ORTHO05D001261 1.3e-06 57.4 180 24.4
PSO782G0985 Papaver somniferum HOM05D001445 ORTHO05D001261 1.3e-06 57.4 183 23.0
BcaC06g34300 Brassica carinata HOM05D008727 ORTHO05D011379 1.7e-06 57.0 181 28.7
FvH4_5g21030 Fragaria vesca HOM05D001445 ORTHO05D001261 2.3e-06 56.6 175 26.3
Prupe.2G115600 Prunus persica HOM05D001445 ORTHO05D001261 2.3e-06 56.6 161 27.3
A06p45410 Brassica napus HOM05D008727 ORTHO05D011379 3.9e-06 55.8 181 28.2
BraA06t27409Z Brassica rapa HOM05D008727 ORTHO05D011379 3.9e-06 55.8 181 28.2
TWI81G0308 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 3.9e-06 55.8 175 28.0
Atru.chr5.42 Acer truncatum HOM05D001445 ORTHO05D001261 5.1e-06 55.5 165 27.9
Atru.chr5.72 Acer truncatum HOM05D001445 ORTHO05D001261 5.1e-06 55.5 165 27.9
Glyma.03G103400 Glycine max HOM05D001445 ORTHO05D001261 6.6e-06 55.1 179 26.3
Gohir.A07G126650 Gossypium hirsutum HOM05D001445 ORTHO05D001261 6.6e-06 55.1 180 24.4
PSO782G5274 Papaver somniferum HOM05D001445 ORTHO05D001261 8.7e-06 54.7 176 27.3


User provided reference genes

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