Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p29080 Brassica napus HOM05D004613 ORTHO05D006095 8.1e-67 256.9 128 100.0
C05p42320 Brassica napus HOM05D004613 ORTHO05D006095 2.1e-59 232.3 128 91.4
BolC1t02515H Brassica oleracea HOM05D004613 ORTHO05D006095 3.9e-45 184.9 116 81.9
BolC5t32960H Brassica oleracea HOM05D004613 ORTHO05D006095 2.8e-35 152.1 83 89.2
C01p25640 Brassica napus HOM05D004613 ORTHO05D006095 4.8e-35 151.4 91 84.6
C07p27290 Brassica napus HOM05D004613 ORTHO05D040533 6.3e-35 151.0 91 83.5
BolC7t43257H Brassica oleracea HOM05D004613 ORTHO05D040533 6.3e-35 151.0 91 83.5
C04p20640 Brassica napus HOM05D004613 ORTHO05D006095 4.1e-34 148.3 82 89.0
BolC4t23591H Brassica oleracea HOM05D004613 ORTHO05D006095 4.1e-34 148.3 82 89.0
C04p31600 Brassica napus HOM05D004613 ORTHO05D006095 6.9e-34 147.5 91 83.5
BcaC04g22128 Brassica carinata HOM05D004613 ORTHO05D006095 9.1e-34 147.1 89 83.1
C09p23030 Brassica napus HOM05D004613 ORTHO05D006095 9.1e-34 147.1 91 81.3
BcaC09g50421 Brassica carinata HOM05D004613 ORTHO05D006095 1.5e-33 146.4 89 83.1
BcaC07g37284 Brassica carinata HOM05D004613 ORTHO05D006095 2.6e-33 145.6 91 81.3
BolC8t47558H Brassica oleracea HOM05D004613 ORTHO05D006095 2.6e-33 145.6 91 81.3
C03p71850 Brassica napus HOM05D004613 ORTHO05D006095 1.3e-32 143.3 88 81.8
C03p78440 Brassica napus HOM05D012085 ORTHO05D006095 8.5e-32 140.6 82 82.9
BraA06t26679Z Brassica rapa HOM05D004613 ORTHO05D006095 2.5e-31 139.0 111 67.6
BcaNung04365 Brassica carinata HOM05D004613 ORTHO05D006095 7.2e-31 137.5 111 66.7
A06p37600 Brassica napus HOM05D004613 ORTHO05D006095 2.7e-30 135.6 111 65.8
BolC7t44599H Brassica oleracea HOM05D004613 ORTHO05D006095 1.4e-29 133.3 111 65.8
BcaNung02466 Brassica carinata HOM05D004613 ORTHO05D006095 6.7e-29 131.0 111 64.9
C07p40710 Brassica napus HOM05D004613 ORTHO05D006095 6.7e-29 131.0 111 64.9
Sp2g20610 Schrenkiella parvula HOM05D004613 ORTHO05D006095 2.0e-28 129.4 112 64.3
C02p33910 Brassica napus HOM05D004613 ORTHO05D006095 8.2e-27 124.0 87 78.2
C09p20670 Brassica napus HOM05D004613 ORTHO05D006095 2.4e-26 122.5 93 72.0
AL6G39630 Arabidopsis lyrata HOM05D004613 ORTHO05D006095 1.5e-25 119.8 111 60.4
CARHR185980 Cardamine hirsuta HOM05D004613 ORTHO05D006095 5.0e-24 114.8 111 60.4
Thhalv10004565m.g Eutrema salsugineum HOM05D004613 ORTHO05D006095 1.2e-22 110.2 110 60.0
Carub.0006s2516 Capsella rubella HOM05D004613 ORTHO05D006095 3.6e-22 108.6 110 57.3
AT5G27395 Arabidopsis thaliana HOM05D004613 ORTHO05D006095 4.7e-22 108.2 111 56.8
C04p09800 Brassica napus HOM05D004613 ORTHO05D006095 2.3e-21 105.9 61 83.6
BcaC02g11087 Brassica carinata HOM05D004010 ORTHO05D006095 3.7e-19 98.6 55 87.3
BolC4t23587H Brassica oleracea HOM05D004613 ORTHO05D006095 4.8e-19 98.2 58 82.8
Aa31LG11G9160 Aethionema arabicum HOM05D004613 ORTHO05D006095 3.8e-16 88.6 117 49.6
Hund07039 Selenicereus undatus HOM05D004613 ORTHO05D006095 7.2e-15 84.3 112 42.0
BcaB01g02574 Brassica carinata HOM05D001081 ORTHO05D004708 3.6e-14 82.0 59 71.2
QL03p004304 Quercus lobata HOM05D004613 ORTHO05D006095 3.6e-14 82.0 101 42.6
C07p10570 Brassica napus HOM05D004613 ORTHO05D014940 2.3e-13 79.3 69 60.9
Cfa006537 Carpinus fangiana HOM05D004613 ORTHO05D006095 5.7e-12 74.7 89 43.8
MD04G1209800 Malus domestica HOM05D004613 ORTHO05D006095 3.1e-10 68.9 92 43.5
Potri.013G026700 Populus trichocarpa HOM05D004613 ORTHO05D006095 7.7e-09 64.3 69 47.8
THA.LOC104818675 Tarenaya hassleriana HOM05D004613 ORTHO05D006095 1.3e-08 63.5 90 44.4
TAR365G0571 Trochodendron aralioides HOM05D004613 ORTHO05D006095 1.3e-08 63.5 80 45.0
Nn1g02102 Nelumbo nucifera HOM05D004613 ORTHO05D006095 2.2e-08 62.8 71 47.9
EL10Ac4g09300 Beta vulgaris HOM05D004613 ORTHO05D006095 2.9e-08 62.4 105 36.2
Ciclev10001987m.g Citrus clementina HOM05D004613 ORTHO05D006095 2.9e-08 62.4 90 35.6
Thecc.05G300000 Theobroma cacao HOM05D004613 ORTHO05D006095 2.9e-08 62.4 90 38.9
Haze_04249 Corylus avellana HOM05D004613 ORTHO05D006095 3.8e-08 62.0 56 51.8
RcHm_v2.0_Chr3g0454031 Rosa chinensis HOM05D004613 ORTHO05D006095 3.8e-08 62.0 118 36.4
Cpa.g.sc48.6 Carica papaya HOM05D004613 ORTHO05D006095 6.5e-08 61.2 96 35.4
Rhsim07G0179300 Rhododendron simsii HOM05D004613 ORTHO05D006095 6.5e-08 61.2 89 37.1
FAN14G3061 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.5e-07 60.1 107 37.4
CiPaw.08G167100 Carya illinoinensis HOM05D004613 ORTHO05D006095 1.9e-07 59.7 88 38.6
MD12G1224400 Malus domestica HOM05D004613 ORTHO05D006095 1.9e-07 59.7 119 35.3
Prupe.6G330700 Prunus persica HOM05D004613 ORTHO05D006095 1.9e-07 59.7 96 39.6
ATR0626G318 Amborella trichopoda HOM05D004613 ORTHO05D006095 2.5e-07 59.3 61 45.9
A03p64770 Brassica napus HOM05D030286 ORTHO05D014940 3.2e-07 58.9 32 87.5
FvH4_6g05290 Fragaria vesca HOM05D004613 ORTHO05D006095 3.2e-07 58.9 114 35.1
MBI17_g29025_MAGBIO Magnolia biondii HOM05D004613 ORTHO05D006095 4.2e-07 58.5 104 36.5
FAN05G3359 Fragaria x ananassa HOM05D004613 ORTHO05D006095 7.2e-07 57.8 114 34.2
Sabra13G0027500 Salix brachista HOM05D004613 ORTHO05D006095 7.2e-07 57.8 95 33.7
BcaC03g15600 Brassica carinata HOM05D008340 ORTHO05D014940 9.4e-07 57.4 59 55.9
BraA06t25731Z Brassica rapa HOM05D030286 ORTHO05D014940 9.4e-07 57.4 32 84.4
TWI56G1338 Tripterygium wilfordii HOM05D004613 ORTHO05D006095 9.4e-07 57.4 60 51.7
FAN05G4103 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.2e-06 57.0 114 34.2
Phvul.007G182600 Phaseolus vulgaris HOM05D004613 ORTHO05D006095 1.6e-06 56.6 60 50.0
FAN02G3501 Fragaria x ananassa HOM05D004613 ORTHO05D006095 2.7e-06 55.8 114 33.3
A09p36030 Brassica napus HOM05D030286 ORTHO05D014940 3.6e-06 55.5 32 84.4
PSO170G6761 Papaver somniferum HOM05D004613 ORTHO05D006095 3.6e-06 55.5 61 49.2
PSO407G0072 Papaver somniferum HOM05D004613 ORTHO05D006095 3.6e-06 55.5 61 49.2
Gohir.A08G212400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 4.7e-06 55.1 111 37.8
Gorai.004G243600 Gossypium raimondii HOM05D004613 ORTHO05D006095 4.7e-06 55.1 111 37.8
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 4.7e-06 55.1 60 43.3
VMungo0720G0951 Vigna mungo HOM05D004613 ORTHO05D006095 4.7e-06 55.1 60 48.3
Duzib128G1218 Durio zibethinus HOM05D004613 ORTHO05D006095 6.1e-06 54.7 60 48.3
ECA232G1001 Erigeron canadensis HOM05D004613 ORTHO05D006095 6.1e-06 54.7 88 38.6
Actinidia05726 Actinidia chinensis HOM05D004613 ORTHO05D006095 8.0e-06 54.3 63 44.4
FAN09G4458 Fragaria x ananassa HOM05D004613 ORTHO05D006095 8.0e-06 54.3 87 34.5
FAN14G4578 Fragaria x ananassa HOM05D004613 ORTHO05D006095 8.0e-06 54.3 80 40.0


User provided reference genes

Program Settings