Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p28920 Brassica napus HOM05D007203 ORTHO05D100065 5.8e-30 134.8 160 100.0
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 3.9e-18 95.5 52 98.1
C05p39250 Brassica napus HOM05D007203 ORTHO05D039141 1.1e-17 94.0 52 96.2
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 1.1e-17 94.0 52 96.2
BolC5t32659H Brassica oleracea HOM05D007203 ORTHO05D014981 1.1e-17 94.0 52 96.2
BcaC04g20469 Brassica carinata HOM05D007203 ORTHO05D014981 1.5e-17 93.6 53 96.2
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 1.5e-17 93.6 52 96.2
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 4.3e-17 92.0 52 96.2
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 4.3e-17 92.0 52 96.2
BcaC03g15868 Brassica carinata HOM05D007203 ORTHO05D008395 5.6e-17 91.7 52 94.2
A08p11290 Brassica napus HOM05D007203 ORTHO05D014981 5.6e-17 91.7 52 94.2
C03p58910 Brassica napus HOM05D007203 ORTHO05D014981 5.6e-17 91.7 56 89.3
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 5.6e-17 91.7 52 94.2
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 5.6e-17 91.7 52 94.2
A07p08910 Brassica napus HOM05D007203 ORTHO05D014981 1.6e-16 90.1 52 94.2
A08p11270 Brassica napus HOM05D007203 ORTHO05D014981 1.6e-16 90.1 52 94.2
BraA08t33122Z Brassica rapa HOM05D007203 ORTHO05D014981 1.6e-16 90.1 52 94.2
BcaC04g23792 Brassica carinata HOM05D007203 ORTHO05D014981 2.1e-16 89.7 51 94.1
BraA08t33125Z Brassica rapa HOM05D007203 ORTHO05D014981 8.2e-16 87.8 50 94.0
C06p20840 Brassica napus HOM05D007203 ORTHO05D014981 1.1e-15 87.4 50 94.0
BolC6t37271H Brassica oleracea HOM05D007203 ORTHO05D014981 1.1e-15 87.4 50 94.0
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 1.4e-15 87.0 52 92.3
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.4e-15 87.0 52 92.3
BraA07t28682Z Brassica rapa HOM05D007203 ORTHO05D108101 1.4e-15 87.0 55 87.3
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 2.4e-15 86.3 52 92.3
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 3.1e-15 85.9 56 85.7
C02p38520 Brassica napus HOM05D007203 ORTHO05D014981 9.0e-15 84.3 52 88.5
BcaC05g26664 Brassica carinata HOM05D007203 ORTHO05D095942 1.8e-10 70.1 61 68.9
BcaB01g01643 Brassica carinata HOM05D007203 ORTHO05D011558 3.9e-10 68.9 57 71.9
BcaB03g16331 Brassica carinata HOM05D007203 ORTHO05D011558 1.5e-09 67.0 57 70.2
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 1.9e-09 66.6 58 72.4
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 1.9e-09 66.6 58 72.4
BcaB01g02001 Brassica carinata HOM05D007203 ORTHO05D008395 2.5e-09 66.2 57 70.2
BcaB02g11369 Brassica carinata HOM05D007203 ORTHO05D094245 1.6e-08 63.5 57 68.4
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 2.8e-08 62.8 51 72.5
BcaB07g32667 Brassica carinata HOM05D003147 ORTHO05D003245 8.2e-08 61.2 57 68.4
A02p26600 Brassica napus HOM05D007203 ORTHO05D020127 1.4e-07 60.5 58 67.2
BcaB03g12495 Brassica carinata HOM05D007203 ORTHO05D020127 3.1e-07 59.3 53 69.8
BcaC08g43729 Brassica carinata HOM05D007203 ORTHO05D092975 5.3e-07 58.5 58 65.5
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 5.3e-07 58.5 58 65.5
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 5.3e-07 58.5 58 65.5
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 1.2e-06 57.4 57 66.7
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 1.5e-06 57.0 58 63.8
C04p52660 Brassica napus HOM05D007203 ORTHO05D020137 2.6e-06 56.2 57 64.9
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-06 56.2 53 67.9
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 2.6e-06 56.2 56 66.1
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 3.4e-06 55.8 54 68.5
A01p28280 Brassica napus HOM05D004128 ORTHO05D017536 4.5e-06 55.5 53 69.8
A01p36020 Brassica napus HOM05D007203 ORTHO05D020137 4.5e-06 55.5 58 63.8
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 4.5e-06 55.5 53 69.8
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 4.5e-06 55.5 53 69.8
BolC3t17978H Brassica oleracea HOM05D007203 ORTHO05D020127 4.5e-06 55.5 53 69.8
BraA07t29497Z Brassica rapa HOM05D004128 ORTHO05D017536 4.5e-06 55.5 53 69.8
BraA08t33243Z Brassica rapa HOM05D004128 ORTHO05D017536 4.5e-06 55.5 53 69.8
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 7.7e-06 54.7 58 62.1
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 7.7e-06 54.7 60 58.3
C01p47030 Brassica napus HOM05D007203 ORTHO05D020137 1.0e-05 54.3 57 63.2
BolC1t04671H Brassica oleracea HOM05D007203 ORTHO05D020137 1.0e-05 54.3 57 63.2


User provided reference genes

Program Settings