Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p28440 Brassica napus HOM05D001498 ORTHO05D013033 8.1e-79 297.0 146 100.0
BolC3t18712H Brassica oleracea HOM05D001498 ORTHO05D011448 1.5e-72 276.2 145 93.8
C03p80470 Brassica napus HOM05D001498 ORTHO05D011448 7.3e-72 273.9 145 93.1
C09p16600 Brassica napus HOM05D001498 ORTHO05D011448 9.6e-72 273.5 145 92.4
C03p66020 Brassica napus HOM05D001498 ORTHO05D011448 2.1e-71 272.3 145 92.4
C03p75890 Brassica napus HOM05D001498 ORTHO05D011448 2.1e-71 272.3 145 92.4
C09p19430 Brassica napus HOM05D001498 ORTHO05D013028 3.6e-71 271.6 145 92.4
BolC6t36733H Brassica oleracea HOM05D001498 ORTHO05D011506 3.6e-71 271.6 145 92.4
A08p08110 Brassica napus HOM05D001498 ORTHO05D011448 1.1e-70 270.0 145 91.7
C04p36720 Brassica napus HOM05D001498 ORTHO05D011448 1.4e-70 269.6 145 91.7
BraA07t28351Z Brassica rapa HOM05D001498 ORTHO05D011448 1.8e-70 269.2 145 90.3
C05p34950 Brassica napus HOM05D001498 ORTHO05D011448 3.1e-70 268.5 145 91.7
C07p30740 Brassica napus HOM05D001498 ORTHO05D011448 4.0e-70 268.1 145 91.7
C08p08890 Brassica napus HOM05D001498 ORTHO05D011448 4.0e-70 268.1 145 91.0
C04p41870 Brassica napus HOM05D001498 ORTHO05D011448 5.2e-70 267.7 145 91.0
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 6.9e-70 267.3 145 91.7
C08p17900 Brassica napus HOM05D001498 ORTHO05D011448 1.5e-69 266.2 145 91.0
BolC8t49420H Brassica oleracea HOM05D001498 ORTHO05D011448 1.5e-69 266.2 145 91.0
A08p06040 Brassica napus HOM05D001498 ORTHO05D013028 2.0e-69 265.8 145 89.0
C02p52010 Brassica napus HOM05D001498 ORTHO05D013028 2.0e-69 265.8 145 91.0
A08p09500 Brassica napus HOM05D001498 ORTHO05D011448 3.4e-69 265.0 145 89.0
BcaC07g38655 Brassica carinata HOM05D001498 ORTHO05D011448 5.8e-69 264.2 145 89.7
A05p28410 Brassica napus HOM05D001498 ORTHO05D011448 9.9e-69 263.5 145 89.0
A01p26280 Brassica napus HOM05D001498 ORTHO05D011448 2.2e-68 262.3 145 89.7
BolC6t38704H Brassica oleracea HOM05D001498 ORTHO05D011448 4.9e-68 261.2 145 89.0
C01p30540 Brassica napus HOM05D001498 ORTHO05D011263 8.4e-68 260.4 145 89.7
C08p06700 Brassica napus HOM05D001498 ORTHO05D011448 3.2e-67 258.5 158 83.5
BcaC01g06537 Brassica carinata HOM05D001498 ORTHO05D011448 4.2e-67 258.1 145 89.0
BolC3t13783H Brassica oleracea HOM05D001498 ORTHO05D011448 4.2e-67 258.1 145 89.0
C07p01260 Brassica napus HOM05D001498 ORTHO05D011448 7.1e-67 257.3 145 90.3
BcaC02g10288 Brassica carinata HOM05D001498 ORTHO05D011448 1.0e-65 253.4 145 87.6
BcaB04g18488 Brassica carinata HOM05D001498 ORTHO05D011448 9.6e-64 246.9 145 84.8
BolC6t36734H Brassica oleracea HOM05D001498 ORTHO05D011448 9.6e-64 246.9 133 92.5
A10p06620 Brassica napus HOM05D001498 ORTHO05D011448 6.9e-62 240.7 136 89.0
BolC3t19486H Brassica oleracea HOM05D001498 ORTHO05D013033 6.9e-62 240.7 129 92.2
BraA08t32604Z Brassica rapa HOM05D001498 ORTHO05D011263 1.8e-57 226.1 125 88.8
BolC3t18909H Brassica oleracea HOM05D001498 ORTHO05D011448 8.7e-49 197.2 106 91.5
BolC9t54650H Brassica oleracea HOM05D001498 ORTHO05D013033 1.1e-48 196.8 99 96.0
C03p66360 Brassica napus HOM05D001498 ORTHO05D013028 3.3e-48 195.3 106 90.6
C06p18080 Brassica napus HOM05D001498 ORTHO05D011878 4.3e-48 194.9 106 91.5
A08p07520 Brassica napus HOM05D001498 ORTHO05D013033 2.2e-44 182.6 94 94.7
BolC1t04860H Brassica oleracea HOM05D001498 ORTHO05D013033 2.2e-44 182.6 94 94.7
C03p44600 Brassica napus HOM05D001498 ORTHO05D011448 3.8e-44 181.8 145 67.6
BolC9t57314H Brassica oleracea HOM05D001498 ORTHO05D011506 5.5e-43 177.9 106 84.0
C09p27450 Brassica napus HOM05D001498 ORTHO05D013033 2.3e-41 172.6 95 91.6
C03p56240 Brassica napus HOM05D001498 ORTHO05D011448 2.2e-39 166.0 89 93.3
C04p21390 Brassica napus HOM05D001498 ORTHO05D013033 3.1e-38 162.2 83 95.2
C09p21190 Brassica napus HOM05D001498 ORTHO05D011448 5.3e-38 161.4 89 92.1
BolC7t45419H Brassica oleracea HOM05D001498 ORTHO05D011878 5.3e-38 161.4 89 91.0
A10p06870 Brassica napus HOM05D001498 ORTHO05D013033 6.9e-38 161.0 86 91.9
C06p23310 Brassica napus HOM05D001498 ORTHO05D013033 2.0e-37 159.5 84 92.9
A09p33380 Brassica napus HOM05D001498 ORTHO05D013033 3.4e-37 158.7 84 92.9
BraA09t38880Z Brassica rapa HOM05D001498 ORTHO05D013033 3.4e-37 158.7 84 92.9
A07p02030 Brassica napus HOM05D001498 ORTHO05D011448 7.2e-35 151.0 89 87.6
C06p31040 Brassica napus HOM05D001498 ORTHO05D013033 9.4e-35 150.6 79 92.4
BcaC06g33590 Brassica carinata HOM05D001498 ORTHO05D093683 1.2e-34 150.2 145 59.3
BraA08t32832Z Brassica rapa HOM05D001498 ORTHO05D011263 4.6e-34 148.3 145 57.9
BraA09t40145Z Brassica rapa HOM05D001498 ORTHO05D013033 6.1e-34 147.9 88 86.4
BolC3t17912H Brassica oleracea HOM05D001498 ORTHO05D011263 5.7e-32 141.4 145 55.2
BolC6t37504H Brassica oleracea HOM05D001498 ORTHO05D013033 5.7e-32 141.4 73 95.9
BolC3t16976H Brassica oleracea HOM05D001498 ORTHO05D011263 1.7e-31 139.8 145 54.5
BraA08t32949Z Brassica rapa HOM05D001498 ORTHO05D011263 1.7e-31 139.8 145 53.8
BraA01t03045Z Brassica rapa HOM05D001498 ORTHO05D011263 3.7e-31 138.7 145 54.5
C07p38520 Brassica napus HOM05D001498 ORTHO05D041705 8.2e-31 137.5 145 55.2
BcaC07g38852 Brassica carinata HOM05D001498 ORTHO05D092219 1.8e-30 136.3 120 65.0
BcaC09g49625 Brassica carinata HOM05D001498 ORTHO05D031765 1.2e-29 133.7 123 52.8
C07p11950 Brassica napus HOM05D007818 ORTHO05D015522 2.5e-27 125.9 139 45.3
A07p05920 Brassica napus HOM05D007818 ORTHO05D015522 3.2e-27 125.6 140 44.3
C01p45320 Brassica napus HOM05D007818 ORTHO05D011878 3.2e-27 125.6 139 44.6
C04p35200 Brassica napus HOM05D007818 ORTHO05D015522 9.4e-27 124.0 139 45.3
BraA01t01576Z Brassica rapa HOM05D007818 ORTHO05D015522 9.4e-27 124.0 122 47.5
C01p41510 Brassica napus HOM05D007818 ORTHO05D015522 1.6e-26 123.2 139 42.4
C05p36060 Brassica napus HOM05D007818 ORTHO05D015522 1.6e-26 123.2 139 44.6
C02p15660 Brassica napus HOM05D007818 ORTHO05D011878 2.1e-26 122.9 139 43.9
C01p34360 Brassica napus HOM05D001498 ORTHO05D031765 2.7e-26 122.5 112 52.7
BolC1t03406H Brassica oleracea HOM05D001498 ORTHO05D031765 2.7e-26 122.5 112 52.7
A01p25450 Brassica napus HOM05D007818 ORTHO05D015522 4.7e-26 121.7 139 43.9
BraA01t02469Z Brassica rapa HOM05D007818 ORTHO05D015522 4.7e-26 121.7 122 46.7
BolC6t35450H Brassica oleracea HOM05D007818 ORTHO05D015522 6.1e-26 121.3 139 43.9
BraA03t15276Z Brassica rapa HOM05D007818 ORTHO05D011878 1.0e-25 120.6 121 45.5
BraA06t25340Z Brassica rapa HOM05D007818 ORTHO05D015522 1.8e-25 119.8 139 42.4
BolC6t36717H Brassica oleracea HOM05D007818 ORTHO05D011878 2.3e-25 119.4 121 46.3
C02p53480 Brassica napus HOM05D001498 ORTHO05D011448 3.0e-25 119.0 63 90.5
BcaC06g36234 Brassica carinata HOM05D007818 ORTHO05D018576 6.7e-25 117.9 144 41.0
BraA08t32773Z Brassica rapa HOM05D001498 ORTHO05D011263 6.7e-25 117.9 145 51.0
BolC5t32989H Brassica oleracea HOM05D007818 ORTHO05D011878 8.8e-25 117.5 121 45.5
C01p48960 Brassica napus HOM05D001498 ORTHO05D013028 1.5e-24 116.7 63 88.9
BolC4t23619H Brassica oleracea HOM05D007818 ORTHO05D018576 2.0e-24 116.3 128 46.1
BolC3t19390H Brassica oleracea HOM05D007818 ORTHO05D018576 3.3e-24 115.5 127 46.5
C09p17590 Brassica napus HOM05D001498 ORTHO05D013033 1.5e-21 106.7 55 94.5
BcaC08g42821 Brassica carinata HOM05D007818 ORTHO05D018576 1.0e-20 104.0 127 41.7
BolC9t59179H Brassica oleracea HOM05D007818 ORTHO05D011878 2.2e-20 102.8 106 44.3
BcaC04g19840 Brassica carinata HOM05D007818 ORTHO05D018576 5.0e-20 101.7 127 40.2
BolC6t36793H Brassica oleracea HOM05D007818 ORTHO05D011878 5.0e-20 101.7 113 46.0
BolC3t18861H Brassica oleracea HOM05D001498 ORTHO05D041705 3.2e-19 99.0 120 49.2
BolC7t41573H Brassica oleracea HOM05D007818 ORTHO05D015522 3.2e-19 99.0 106 43.4
BcaC05g28434 Brassica carinata HOM05D001498 ORTHO05D013033 2.1e-18 96.3 68 72.1
BolC7t40542H Brassica oleracea HOM05D001498 ORTHO05D104051 3.0e-17 92.4 106 50.9
BcaC01g02373 Brassica carinata HOM05D001498 ORTHO05D094875 4.4e-16 88.6 70 70.0
BcaC09g49197 Brassica carinata HOM05D007818 ORTHO05D011878 7.4e-16 87.8 101 43.6
BraSC37t46122Z Brassica rapa HOM05D007818 ORTHO05D011878 1.3e-15 87.0 104 43.3
C01p48070 Brassica napus HOM05D007818 ORTHO05D000013 1.7e-15 86.7 91 47.3
BolC9t56135H Brassica oleracea HOM05D007818 ORTHO05D011878 2.2e-15 86.3 122 37.7
C01p38670 Brassica napus HOM05D001498 ORTHO05D013033 2.8e-15 85.9 42 92.9
A08p07530 Brassica napus HOM05D001498 ORTHO05D013028 3.7e-15 85.5 57 77.2
C04p55370 Brassica napus HOM05D007818 ORTHO05D000013 4.8e-15 85.1 91 46.2
C05p44350 Brassica napus HOM05D007818 ORTHO05D000013 4.8e-15 85.1 80 50.0
C07p06900 Brassica napus HOM05D007818 ORTHO05D000013 4.8e-15 85.1 88 47.7
C05p45440 Brassica napus HOM05D007818 ORTHO05D000013 8.2e-15 84.3 91 45.1
C07p00660 Brassica napus HOM05D007818 ORTHO05D000013 8.2e-15 84.3 91 45.1
BolC6t36237H Brassica oleracea HOM05D001498 ORTHO05D013033 1.1e-14 84.0 42 92.9
A10p08820 Brassica napus HOM05D007818 ORTHO05D011878 3.1e-14 82.4 104 41.3
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 5.3e-14 81.6 103 49.5
C07p08980 Brassica napus HOM05D007818 ORTHO05D011878 9.1e-14 80.9 85 48.2
BraA09t37757Z Brassica rapa HOM05D007818 ORTHO05D015532 1.6e-13 80.1 109 40.4
C06p26590 Brassica napus HOM05D007818 ORTHO05D015522 1.3e-12 77.0 89 41.6
BolC4t22585H Brassica oleracea HOM05D007818 ORTHO05D018576 3.8e-12 75.5 85 45.9
BolC3t19185H Brassica oleracea HOM05D007818 ORTHO05D011878 6.5e-12 74.7 135 33.3
C04p56140 Brassica napus HOM05D001498 ORTHO05D013033 2.5e-11 72.8 36 94.4
BcaB03g16424 Brassica carinata HOM05D007818 ORTHO05D011878 3.2e-11 72.4 89 41.6
BcaB05g22882 Brassica carinata HOM05D007818 ORTHO05D011878 1.2e-10 70.5 89 38.2
C07p11030 Brassica napus HOM05D007818 ORTHO05D011878 3.6e-10 68.9 76 43.4
BcaC01g03920 Brassica carinata HOM05D001498 ORTHO05D091853 2.3e-09 66.2 39 82.1
BolC2t11285H Brassica oleracea HOM05D001498 ORTHO05D106766 6.7e-09 64.7 32 100.0
C03p66160 Brassica napus HOM05D007818 ORTHO05D041367 1.2e-08 63.9 114 30.7
BcaB06g26756 Brassica carinata HOM05D007818 ORTHO05D011878 2.0e-08 63.2 80 41.2
BcaC01g01870 Brassica carinata HOM05D007818 ORTHO05D018576 2.0e-08 63.2 76 43.4
C07p08860 Brassica napus HOM05D007818 ORTHO05D042921 2.0e-08 63.2 112 30.4
BolC3t18888H Brassica oleracea HOM05D007818 ORTHO05D041367 2.0e-08 63.2 114 30.7
BolC7t41300H Brassica oleracea HOM05D007818 ORTHO05D042921 2.0e-08 63.2 112 30.4
BcaB07g33901 Brassica carinata HOM05D007818 ORTHO05D011878 4.4e-08 62.0 63 47.6
Sp1g31670 Schrenkiella parvula HOM05D006142 ORTHO05D010451 4.4e-08 62.0 113 30.1
C04p47800 Brassica napus HOM05D007818 ORTHO05D014962 9.7e-08 60.8 139 30.2
BcaB07g33141 Brassica carinata HOM05D013390 ORTHO05D092746 4.8e-07 58.5 57 45.6
BcaC05g26853 Brassica carinata HOM05D007818 ORTHO05D011878 6.3e-07 58.2 76 43.4
C06p04890 Brassica napus HOM05D007818 ORTHO05D011878 4.1e-06 55.5 57 42.1
Sp6g12110 Schrenkiella parvula HOM05D006142 ORTHO05D010451 4.1e-06 55.5 114 27.2
C04p05450 Brassica napus HOM05D007818 ORTHO05D011878 7.0e-06 54.7 53 50.9
Sp7g04550 Schrenkiella parvula HOM05D006142 ORTHO05D010451 7.0e-06 54.7 109 31.2


User provided reference genes

Program Settings