Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p27870 Brassica napus HOM05D000067 ORTHO05D013969 2.6e-18 94.4 47 100.0
A09p21750 Brassica napus HOM05D000067 ORTHO05D000097 4.1e-16 87.0 45 95.6
BraA09t37777Z Brassica rapa HOM05D000067 ORTHO05D000097 4.1e-16 87.0 45 95.6
BcaB07g30887 Brassica carinata HOM05D000067 ORTHO05D000097 2.0e-15 84.7 45 93.3
BcaC08g45202 Brassica carinata HOM05D000067 ORTHO05D000097 2.0e-15 84.7 45 91.1
BraA07t30247Z Brassica rapa HOM05D000067 ORTHO05D000097 2.0e-15 84.7 45 91.1
C06p28280 Brassica napus HOM05D000067 ORTHO05D000097 2.9e-14 80.9 45 88.9
BolC6t37998H Brassica oleracea HOM05D000067 ORTHO05D000097 2.9e-14 80.9 45 88.9
AL1G55540 Arabidopsis lyrata HOM05D000067 ORTHO05D013969 8.8e-11 69.3 49 73.5
BcaB04g18357 Brassica carinata HOM05D000067 ORTHO05D000097 8.8e-11 69.3 45 68.9
AT1G48820 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 2.0e-10 68.2 45 75.6
BraA09t37522Z Brassica rapa HOM05D000067 ORTHO05D000097 1.7e-09 65.1 48 66.7
AL1G55520 Arabidopsis lyrata HOM05D000067 ORTHO05D000097 2.8e-09 64.3 48 68.8
AT1G48800 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 4.8e-09 63.5 48 66.7
A09p19050 Brassica napus HOM05D005293 ORTHO05D006764 8.3e-09 62.8 48 64.6
BcaC04g22066 Brassica carinata HOM05D000067 ORTHO05D000097 1.4e-08 62.0 48 62.5
C09p23880 Brassica napus HOM05D005293 ORTHO05D006764 1.4e-08 62.0 48 62.5
BolC9t55310H Brassica oleracea HOM05D000067 ORTHO05D000097 1.4e-08 62.0 48 62.5
AT3G29110 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 1.8e-08 61.6 49 65.3
A10p15020 Brassica napus HOM05D000067 ORTHO05D000097 2.4e-08 61.2 48 68.8
BcaB03g11634 Brassica carinata HOM05D000067 ORTHO05D000097 3.1e-08 60.8 45 68.9
AT4G20200 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 7.0e-08 59.7 49 61.2
A08p14460 Brassica napus HOM05D000067 ORTHO05D000097 7.0e-08 59.7 45 66.7
C03p82530 Brassica napus HOM05D000067 ORTHO05D000097 7.0e-08 59.7 45 66.7
BolC3t20501H Brassica oleracea HOM05D000067 ORTHO05D021172 7.0e-08 59.7 45 66.7
BraA08t33435Z Brassica rapa HOM05D000067 ORTHO05D000097 7.0e-08 59.7 45 66.7
CARHR038790 Cardamine hirsuta HOM05D000067 ORTHO05D000097 7.0e-08 59.7 44 68.2
Thhalv10028539m.g Eutrema salsugineum HOM05D000067 ORTHO05D000097 9.1e-08 59.3 49 61.2
CARHR227020 Cardamine hirsuta HOM05D000067 ORTHO05D000097 1.2e-07 58.9 49 63.3
BcaC01g00624 Brassica carinata HOM05D000067 ORTHO05D000097 1.6e-07 58.5 45 64.4
BcaB03g11635 Brassica carinata HOM05D000067 ORTHO05D000097 2.7e-07 57.8 45 64.4
Carub.0001s3796 Capsella rubella HOM05D000067 ORTHO05D000097 3.5e-07 57.4 49 61.2
Aa31LG6G2620 Aethionema arabicum HOM05D000067 ORTHO05D000097 4.5e-07 57.0 45 57.8
Aa31sc1125G10 Aethionema arabicum HOM05D000067 ORTHO05D013969 5.9e-07 56.6 48 56.2
AT1G66020 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 7.7e-07 56.2 49 57.1
C03p82520 Brassica napus HOM05D000067 ORTHO05D000097 7.7e-07 56.2 45 62.2
BolC3t20502H Brassica oleracea HOM05D000067 ORTHO05D000097 7.7e-07 56.2 45 62.2
Carub.0006s2747 Capsella rubella HOM05D000067 ORTHO05D000097 1.0e-06 55.8 48 62.5
Aa31sc77G60 Aethionema arabicum HOM05D000067 ORTHO05D013969 1.3e-06 55.5 45 57.8
A08p14870 Brassica napus HOM05D000067 ORTHO05D000097 1.3e-06 55.5 48 56.2
BraA08t33470Z Brassica rapa HOM05D000067 ORTHO05D000097 1.3e-06 55.5 48 56.2
Carub.0001s3795 Capsella rubella HOM05D000067 ORTHO05D000097 1.3e-06 55.5 50 62.0
Carub.0007s2094 Capsella rubella HOM05D000067 ORTHO05D000097 1.7e-06 55.1 49 53.1
CARHR227030 Cardamine hirsuta HOM05D000067 ORTHO05D000097 1.7e-06 55.1 49 59.2
AT4G20230 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 2.2e-06 54.7 49 57.1
BcaNung03493 Brassica carinata HOM05D000067 ORTHO05D000097 2.2e-06 54.7 48 56.2
CARHR227040 Cardamine hirsuta HOM05D000067 ORTHO05D000097 2.9e-06 54.3 49 57.1
A02p28480 Brassica napus HOM05D000067 ORTHO05D000097 5.0e-06 53.5 50 54.0
BraA02t07884Z Brassica rapa HOM05D000067 ORTHO05D000097 5.0e-06 53.5 50 54.0
BraA10t43579Z Brassica rapa HOM05D000067 ORTHO05D000097 5.0e-06 53.5 43 67.4
Thhalv10027515m.g Eutrema salsugineum HOM05D000067 ORTHO05D000097 5.0e-06 53.5 48 56.2
AL4G13120 Arabidopsis lyrata HOM05D000067 ORTHO05D000097 6.5e-06 53.1 48 56.2
AT3G29190 Arabidopsis thaliana HOM05D000067 ORTHO05D000097 6.5e-06 53.1 49 53.1
BolC7t45578H Brassica oleracea HOM05D000067 ORTHO05D000097 8.5e-06 52.8 48 52.1


User provided reference genes

Program Settings