Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p27300 Brassica napus HOM05D006667 ORTHO05D008387 2.2e-78 295.8 175 100.0
C06p28130 Brassica napus HOM05D006667 ORTHO05D008387 1.2e-47 193.7 126 89.7
BolC6t38487H Brassica oleracea HOM05D006667 ORTHO05D008387 5.6e-42 174.9 114 98.2
BolC6t37979H Brassica oleracea HOM05D006667 ORTHO05D008387 4.7e-41 171.8 114 92.1
BcaC04g21805 Brassica carinata HOM05D006667 ORTHO05D008387 2.4e-13 79.7 75 88.0
BcaC03g18029 Brassica carinata HOM05D006667 ORTHO05D008387 1.0e-11 74.3 81 51.9
C02p60910 Brassica napus HOM05D006667 ORTHO05D008387 1.0e-11 74.3 81 51.9
BraA06t26360Z Brassica rapa HOM05D006667 ORTHO05D008387 1.0e-11 74.3 82 68.3
BraA02t09050Z Brassica rapa HOM05D006667 ORTHO05D008387 1.7e-11 73.6 81 56.8
A02p41020 Brassica napus HOM05D006667 ORTHO05D008387 2.3e-11 73.2 81 55.6
Thhalv10004329m.g Eutrema salsugineum HOM05D006667 ORTHO05D008387 3.0e-11 72.8 82 70.7
Dinv07500 Davidia involucrata HOM05D006667 ORTHO05D008387 5.1e-11 72.0 119 52.9
Rhsim12G0089400 Rhododendron simsii HOM05D006667 ORTHO05D008387 5.1e-11 72.0 119 41.2
AL6G34600 Arabidopsis lyrata HOM05D006667 ORTHO05D008387 6.6e-11 71.6 82 68.3
Prupe.1G349400 Prunus persica HOM05D006667 ORTHO05D008387 3.3e-10 69.3 89 46.1
FAN12G3199 Fragaria x ananassa HOM05D006667 ORTHO05D008387 4.3e-10 68.9 90 46.7
Actinidia04346 Actinidia chinensis HOM05D006667 ORTHO05D008387 5.6e-10 68.6 89 44.9
QL03p045401 Quercus lobata HOM05D006667 ORTHO05D008387 5.6e-10 68.6 119 52.1
THA.LOC104819372 Tarenaya hassleriana HOM05D006667 ORTHO05D008387 5.6e-10 68.6 82 64.6
FvH4_4g37160 Fragaria vesca HOM05D006667 ORTHO05D008387 9.6e-10 67.8 89 46.1
Glyma.20G102500 Glycine max HOM05D006667 ORTHO05D008387 1.6e-09 67.0 108 57.4
VMungo0720G1985 Vigna mungo HOM05D006667 ORTHO05D008387 1.6e-09 67.0 107 40.2
COL.COLO4_33111 Corchorus olitorius HOM05D006667 ORTHO05D008387 3.6e-09 65.9 63 79.4
Psat6g234200 Pisum sativum HOM05D006667 ORTHO05D008387 3.6e-09 65.9 85 43.5
Sabra07G0063900 Salix brachista HOM05D006667 ORTHO05D008387 3.6e-09 65.9 127 34.6
Gohir.A12G132300 Gossypium hirsutum HOM05D006667 ORTHO05D008387 6.2e-09 65.1 70 81.4
BcaB07g29860 Brassica carinata HOM05D006667 ORTHO05D008387 8.1e-09 64.7 62 88.7
Carub.0006s2112 Capsella rubella HOM05D006667 ORTHO05D008387 8.1e-09 64.7 82 72.0
arahy.Tifrunner.gnm1.ann1.F8B6JQ Arachis hypogaea HOM05D006667 ORTHO05D008387 1.1e-08 64.3 101 38.6
arahy.Tifrunner.gnm1.ann1.IH6UK4 Arachis hypogaea HOM05D006667 ORTHO05D008387 1.1e-08 64.3 101 38.6
Glyma.10G286600 Glycine max HOM05D006667 ORTHO05D008387 1.1e-08 64.3 82 43.9
Sed0022119 Sechium edule HOM05D006667 ORTHO05D008387 1.1e-08 64.3 142 47.2
Gohir.D12G135900 Gossypium hirsutum HOM05D006667 ORTHO05D008387 1.4e-08 63.9 70 72.9
Gorai.008G147100 Gossypium raimondii HOM05D006667 ORTHO05D008387 1.4e-08 63.9 70 72.9
Medtr1g114610 Medicago truncatula HOM05D006667 ORTHO05D008387 1.4e-08 63.9 82 43.9
RcHm_v2.0_Chr4g0446961 Rosa chinensis HOM05D006667 ORTHO05D008387 1.4e-08 63.9 90 46.7
Phvul.007G014200 Phaseolus vulgaris HOM05D006667 ORTHO05D008387 2.4e-08 63.2 109 59.6
Sabra05G0073100 Salix brachista HOM05D006667 ORTHO05D008387 2.4e-08 63.2 127 33.9
CANSAT78G2402 Cannabis sativa HOM05D006667 ORTHO05D008387 3.1e-08 62.8 108 39.8
CAN.G274.16 Capsicum annuum HOM05D006667 ORTHO05D008387 3.1e-08 62.8 114 56.1
Lj5g0023243 Lotus japonicus HOM05D006667 ORTHO05D008387 3.1e-08 62.8 69 47.8
Nitab4.5_0004979g0060 Nicotiana tabacum HOM05D006667 ORTHO05D008387 4.0e-08 62.4 114 54.4
ClCG02G014160 Citrullus lanatus HOM05D006667 ORTHO05D008387 5.2e-08 62.0 140 47.9
Manes.04G162700 Manihot esculenta HOM05D006667 ORTHO05D008387 5.2e-08 62.0 67 73.1
Thecc.02G154400 Theobroma cacao HOM05D006667 ORTHO05D008387 5.2e-08 62.0 63 85.7
PGSC0003DMG400011513 Solanum tuberosum HOM05D006667 ORTHO05D008387 8.9e-08 61.2 106 36.8
Lalb_Chr02g0143651 Lupinus albus HOM05D006667 ORTHO05D008387 1.2e-07 60.8 88 40.9
Solyc04g008980.3 Solanum lycopersicum HOM05D006667 ORTHO05D008387 1.2e-07 60.8 106 52.8
Sopen04g004160 Solanum pennellii HOM05D006667 ORTHO05D008387 1.2e-07 60.8 106 52.8
Cfa008778 Carpinus fangiana HOM05D006667 ORTHO05D008387 2.0e-07 60.1 70 68.6
Migut.L00803 Erythranthe guttata HOM05D006667 ORTHO05D008387 2.0e-07 60.1 89 51.7
Nitab4.5_0005997g0030 Nicotiana tabacum HOM05D006667 ORTHO05D008387 2.0e-07 60.1 106 57.5
Peaxi162Scf00681g00319 Petunia axillaris HOM05D006667 ORTHO05D008387 2.0e-07 60.1 111 45.9
Sed0011343 Sechium edule HOM05D006667 ORTHO05D008387 2.6e-07 59.7 142 47.9
TAR622G0133 Trochodendron aralioides HOM05D006667 ORTHO05D008387 2.6e-07 59.7 89 42.7
EL10Ac9g22983 Beta vulgaris HOM05D006667 ORTHO05D008387 3.4e-07 59.3 89 61.8
Hund24389 Selenicereus undatus HOM05D006667 ORTHO05D008387 4.4e-07 58.9 115 56.5
MELO3C011757.2 Cucumis melo HOM05D006667 ORTHO05D008387 5.8e-07 58.5 135 31.9
CsaV3_5G029020 Cucumis sativus L. HOM05D006667 ORTHO05D008387 5.8e-07 58.5 120 32.5
TWI74G1436 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 5.8e-07 58.5 89 59.6
CiPaw.05G172300 Carya illinoinensis HOM05D006667 ORTHO05D008387 7.6e-07 58.2 142 43.0
Potri.007G075600 Populus trichocarpa HOM05D006667 ORTHO05D008387 1.7e-06 57.0 117 36.8
Aqoxy3G04313 Aquilegia oxysepala HOM05D006667 ORTHO05D008387 2.2e-06 56.6 118 35.6
MBI06_g27487_MAGBIO Magnolia biondii HOM05D006667 ORTHO05D008387 2.2e-06 56.6 101 49.5
Potri.005G088800 Populus trichocarpa HOM05D006667 ORTHO05D008387 2.9e-06 56.2 70 41.4
unitig_749.g13342 Utricularia gibba HOM05D006667 ORTHO05D008387 2.9e-06 56.2 125 32.8
AUR62032948 Chenopodium quinoa HOM05D006667 ORTHO05D008387 3.8e-06 55.8 81 39.5
DCAR_002607 Daucus carota HOM05D006667 ORTHO05D008387 8.4e-06 54.7 127 32.3
Lj6A708T61 Lonicera japonica HOM05D006667 ORTHO05D008387 8.4e-06 54.7 69 44.9
Lj6A713T75 Lonicera japonica HOM05D006667 ORTHO05D008387 8.4e-06 54.7 69 44.9


User provided reference genes

Program Settings