Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p27130 Brassica napus HOM05D007568 ORTHO05D009779 2.0e-143 512.3 238 100.0
C03p18690 Brassica napus HOM05D007568 ORTHO05D009779 1.1e-141 506.5 238 98.7
BolC9t55448H Brassica oleracea HOM05D007568 ORTHO05D009779 1.1e-141 506.5 238 98.7
BolC3t14260H Brassica oleracea HOM05D007568 ORTHO05D009779 3.0e-139 498.4 238 97.5
BcaC01g06154 Brassica carinata HOM05D007568 ORTHO05D009779 1.5e-135 486.1 240 94.6
A02p32020 Brassica napus HOM05D007568 ORTHO05D009779 1.9e-133 479.2 238 93.7
BraA02t08213Z Brassica rapa HOM05D007568 ORTHO05D009779 1.9e-133 479.2 238 93.7
BcaC02g08832 Brassica carinata HOM05D007568 ORTHO05D009779 3.6e-100 368.6 237 75.5
BcaNung01428 Brassica carinata HOM05D007568 ORTHO05D009779 8.8e-75 284.3 187 74.9
BcaB02g11011 Brassica carinata HOM05D007568 ORTHO05D009779 1.8e-72 276.6 224 59.4
A05p27540 Brassica napus HOM05D007568 ORTHO05D009779 8.6e-54 214.5 225 46.2
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 1.5e-53 213.8 205 50.2
C02p26050 Brassica napus HOM05D007568 ORTHO05D009779 7.3e-53 211.5 225 45.3
A08p24970 Brassica napus HOM05D007568 ORTHO05D009779 1.2e-52 210.7 243 45.3
A03p66230 Brassica napus HOM05D007568 ORTHO05D009779 2.1e-52 209.9 245 43.7
BolC4t25354H Brassica oleracea HOM05D007568 ORTHO05D009779 2.8e-52 209.5 225 45.3
BcaC01g01043 Brassica carinata HOM05D007568 ORTHO05D009779 8.3e-49 198.0 229 46.3
BraA09t40709Z Brassica rapa HOM05D007568 ORTHO05D009779 2.4e-48 196.4 229 41.5
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 1.6e-47 193.7 224 40.2
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 1.0e-46 191.0 224 40.6
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 3.6e-44 182.6 231 37.7
BcaB04g18340 Brassica carinata HOM05D007568 ORTHO05D009779 2.3e-43 179.9 220 40.5
BraA03t15678Z Brassica rapa HOM05D007568 ORTHO05D009779 2.3e-43 179.9 183 48.1
C03p86040 Brassica napus HOM05D007568 ORTHO05D009779 8.9e-43 177.9 231 37.2
C07p00760 Brassica napus HOM05D007568 ORTHO05D009779 1.7e-41 173.7 237 37.6
BcaB04g18026 Brassica carinata HOM05D007568 ORTHO05D009779 2.4e-40 169.9 180 46.7
BolC4t26648H Brassica oleracea HOM05D007568 ORTHO05D009779 6.0e-39 165.2 170 47.6
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 2.8e-36 156.4 144 52.1
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 4.0e-35 152.5 243 36.6
BcaB05g24631 Brassica carinata HOM05D007568 ORTHO05D009779 4.2e-32 142.5 169 41.4
A07p36520 Brassica napus HOM05D007568 ORTHO05D009779 5.4e-32 142.1 216 36.1
BcaC05g26582 Brassica carinata HOM05D007568 ORTHO05D009779 3.9e-30 136.0 170 41.2
BolC8t47055H Brassica oleracea HOM05D007568 ORTHO05D009779 3.6e-28 129.4 61 96.7
BcaB04g20792 Brassica carinata HOM05D007568 ORTHO05D009779 4.7e-28 129.0 225 31.1
C04p50500 Brassica napus HOM05D007568 ORTHO05D009779 1.4e-27 127.5 159 42.1
A03p65180 Brassica napus HOM05D007568 ORTHO05D009779 1.7e-25 120.6 110 53.6
C09p36930 Brassica napus HOM05D007568 ORTHO05D009779 3.8e-25 119.4 168 36.3
BolC9t56523H Brassica oleracea HOM05D007568 ORTHO05D009779 3.8e-25 119.4 168 36.3
C03p18140 Brassica napus HOM05D007568 ORTHO05D009779 5.4e-24 115.5 147 38.8
BraA03t15576Z Brassica rapa HOM05D007568 ORTHO05D009779 6.0e-23 112.1 74 64.9
BolC7t45261H Brassica oleracea HOM05D007568 ORTHO05D009779 1.0e-22 111.3 150 37.3
Sp6g07340 Schrenkiella parvula HOM05D000353 ORTHO05D000174 6.6e-22 108.6 236 29.2
BcaC09g50463 Brassica carinata HOM05D007568 ORTHO05D009779 8.7e-22 108.2 150 36.7
C01p25160 Brassica napus HOM05D030822 ORTHO05D009779 8.7e-22 108.2 136 38.2
BolC1t05940H Brassica oleracea HOM05D007568 ORTHO05D027567 2.5e-21 106.7 84 59.5
A09p28960 Brassica napus HOM05D007568 ORTHO05D009779 3.3e-21 106.3 144 41.7
BraA09t38460Z Brassica rapa HOM05D007568 ORTHO05D009779 3.3e-21 106.3 144 41.7
C04p26530 Brassica napus HOM05D000353 ORTHO05D000174 7.3e-21 105.1 144 40.3
BolC4t23333H Brassica oleracea HOM05D007568 ORTHO05D009779 1.3e-20 104.4 145 40.0
AL5G12730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.8e-20 103.2 220 27.3
AL9U11480 Arabidopsis lyrata HOM05D000353 ORTHO05D011313 2.8e-20 103.2 230 27.4
A04p34410 Brassica napus HOM05D007568 ORTHO05D009779 4.8e-20 102.4 135 35.6
BcaC01g00913 Brassica carinata HOM05D007568 ORTHO05D009779 1.8e-19 100.5 150 36.0
BolC4t23434H Brassica oleracea HOM05D007568 ORTHO05D009779 2.4e-19 100.1 74 60.8
BcaC09g50027 Brassica carinata HOM05D007568 ORTHO05D009779 1.2e-18 97.8 103 44.7
BcaC09g47669 Brassica carinata HOM05D007568 ORTHO05D027567 2.6e-18 96.7 164 35.4
A03p66080 Brassica napus HOM05D007568 ORTHO05D009779 7.6e-18 95.1 103 43.7
A05p17030 Brassica napus HOM05D007568 ORTHO05D009779 7.6e-18 95.1 103 43.7
A01p06890 Brassica napus HOM05D007568 ORTHO05D009779 2.2e-17 93.6 103 42.7
C04p16590 Brassica napus HOM05D030822 ORTHO05D009779 4.9e-17 92.4 119 36.1
C04p22790 Brassica napus HOM05D007568 ORTHO05D027567 4.9e-17 92.4 83 54.2
BolC8t51027H Brassica oleracea HOM05D007568 ORTHO05D009779 6.4e-17 92.0 229 26.6
C03p85880 Brassica napus HOM05D007568 ORTHO05D009779 8.4e-17 91.7 151 35.8
BolC2t09295H Brassica oleracea HOM05D007568 ORTHO05D009779 2.4e-16 90.1 101 43.6
Carub.0007s3602 Capsella rubella HOM05D000353 ORTHO05D000174 9.3e-16 88.2 232 26.7
AL2G19900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.6e-15 87.4 234 24.8
AL2G22230 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.6e-15 87.4 234 24.8
AL6G41900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.6e-15 87.4 234 24.8
Thhalv10027364m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.6e-15 87.4 251 27.9
AL7G11630 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.1e-15 87.0 235 25.5
AL4G20700 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.6e-15 85.9 234 24.8
BcaB08g34681 Brassica carinata HOM05D009963 ORTHO05D009779 6.0e-15 85.5 109 36.7
C06p20120 Brassica napus HOM05D007568 ORTHO05D009779 6.0e-15 85.5 151 33.1
AL2G19910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.3e-14 84.3 234 22.6
Thhalv10000133m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.8e-14 84.0 245 26.9
AL5G12720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.3e-14 83.6 234 22.6
AL6G41910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.3e-14 83.6 234 22.6
BraA09t40707Z Brassica rapa HOM05D000353 ORTHO05D000174 3.0e-14 83.2 236 25.8
AT1G52950 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 3.9e-14 82.8 239 23.0
BcaB03g16823 Brassica carinata HOM05D000353 ORTHO05D000174 3.9e-14 82.8 241 26.1
A03p66100 Brassica napus HOM05D000353 ORTHO05D000174 5.1e-14 82.4 236 25.8
BolC6t36043H Brassica oleracea HOM05D007568 ORTHO05D009779 5.1e-14 82.4 97 40.2
AL2G22240 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.7e-14 82.0 234 22.6
A07p20380 Brassica napus HOM05D007568 ORTHO05D009779 6.7e-14 82.0 98 42.9
BolC2t10349H Brassica oleracea HOM05D007568 ORTHO05D009779 1.5e-13 80.9 207 25.1
BolC8t47824H Brassica oleracea HOM05D000353 ORTHO05D000174 1.9e-13 80.5 172 26.2
Carub.0003s3392 Capsella rubella HOM05D000353 ORTHO05D000174 2.5e-13 80.1 227 23.3
AL9U11490 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.3e-13 79.3 234 22.2
A10p31040 Brassica napus HOM05D000353 ORTHO05D000174 5.6e-13 79.0 240 25.4
AL3G51050 Arabidopsis lyrata HOM05D007965 ORTHO05D023618 2.1e-12 77.0 200 22.5
AL5G12680 Arabidopsis lyrata HOM05D007965 ORTHO05D023618 2.1e-12 77.0 200 22.5
AL8G17270 Arabidopsis lyrata HOM05D007965 ORTHO05D023618 2.1e-12 77.0 200 22.5
C04p16570 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-12 77.0 240 25.4
C05p33950 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-12 77.0 240 25.4
BolC2t08345H Brassica oleracea HOM05D000353 ORTHO05D000174 2.1e-12 77.0 240 25.4
BolC7t45258H Brassica oleracea HOM05D000353 ORTHO05D000174 2.1e-12 77.0 240 25.4
Carub.0002s1156 Capsella rubella HOM05D011333 ORTHO05D011313 2.1e-12 77.0 247 23.9
BcaNung06627 Brassica carinata HOM05D007568 ORTHO05D009779 2.8e-12 76.6 67 50.7
BcaB05g23080 Brassica carinata HOM05D009963 ORTHO05D013780 1.1e-11 74.7 109 35.8
Carub.0005s0849 Capsella rubella HOM05D007965 ORTHO05D023618 1.4e-11 74.3 195 26.7
BraA02t07226Z Brassica rapa HOM05D000353 ORTHO05D000174 2.4e-11 73.6 230 22.2
Carub.0007s3603 Capsella rubella HOM05D000353 ORTHO05D011313 2.4e-11 73.6 238 23.1
AL1G50720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.1e-11 73.2 208 24.0
BcaB06g28316 Brassica carinata HOM05D000353 ORTHO05D000174 3.1e-11 73.2 225 24.0
BcaC01g02309 Brassica carinata HOM05D007568 ORTHO05D009779 3.1e-11 73.2 90 40.0
BolC2t09294H Brassica oleracea HOM05D007568 ORTHO05D009779 3.1e-11 73.2 72 50.0
BcaB04g17762 Brassica carinata HOM05D000353 ORTHO05D000174 4.0e-11 72.8 230 22.6
A01p26990 Brassica napus HOM05D000353 ORTHO05D000174 4.0e-11 72.8 230 24.3
A05p18670 Brassica napus HOM05D007568 ORTHO05D009779 4.0e-11 72.8 72 45.8
BcaB06g27257 Brassica carinata HOM05D000353 ORTHO05D000174 9.0e-11 71.6 233 22.7
C02p26060 Brassica napus HOM05D000353 ORTHO05D000174 2.0e-10 70.5 237 23.6
C04p17840 Brassica napus HOM05D007568 ORTHO05D014500 2.0e-10 70.5 114 36.8
AL8G21940 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.6e-10 70.1 209 23.0
BcaC01g02319 Brassica carinata HOM05D007568 ORTHO05D009779 2.6e-10 70.1 134 32.8
BcaC08g44287 Brassica carinata HOM05D000353 ORTHO05D015453 3.4e-10 69.7 137 27.0
C05p39980 Brassica napus HOM05D000353 ORTHO05D000174 3.4e-10 69.7 231 24.2
BolC8t50060H Brassica oleracea HOM05D007568 ORTHO05D009779 4.5e-10 69.3 135 28.9
AL9U11500 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 7.6e-10 68.6 160 25.6
BolC5t34087H Brassica oleracea HOM05D007568 ORTHO05D009779 7.6e-10 68.6 58 50.0
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.3e-09 67.8 160 25.6
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.3e-09 67.8 160 25.6
A03p30410 Brassica napus HOM05D000353 ORTHO05D000174 1.7e-09 67.4 231 22.9
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.2e-09 67.0 160 25.0
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 2.2e-09 67.0 240 22.5
Carub.0001s3686 Capsella rubella HOM05D012762 ORTHO05D011313 2.2e-09 67.0 253 22.9
BcaB02g11540 Brassica carinata HOM05D011625 ORTHO05D013783 2.9e-09 66.6 149 27.5
BcaB05g23783 Brassica carinata HOM05D000353 ORTHO05D000174 2.9e-09 66.6 231 20.3
A07p20350 Brassica napus HOM05D000353 ORTHO05D000174 2.9e-09 66.6 231 22.9
A03p30400 Brassica napus HOM05D000353 ORTHO05D000174 3.8e-09 66.2 231 22.9
C09p42930 Brassica napus HOM05D000353 ORTHO05D000174 3.8e-09 66.2 179 26.8
BolC9t57163H Brassica oleracea HOM05D000353 ORTHO05D000174 3.8e-09 66.2 179 26.8
Carub.0001s3421 Capsella rubella HOM05D012762 ORTHO05D011313 3.8e-09 66.2 243 23.0
Carub.0004s0702 Capsella rubella HOM05D000353 ORTHO05D000174 3.8e-09 66.2 228 23.2
BcaC06g33059 Brassica carinata HOM05D000353 ORTHO05D000174 4.9e-09 65.9 228 26.3
Carub.0016s0007 Capsella rubella HOM05D000353 ORTHO05D000174 6.4e-09 65.5 200 24.0
AL8G21920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 8.4e-09 65.1 160 25.0
BcaC02g09404 Brassica carinata HOM05D007568 ORTHO05D009779 8.4e-09 65.1 58 50.0
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 8.4e-09 65.1 234 21.4
BcaB07g30022 Brassica carinata HOM05D007568 ORTHO05D009779 1.1e-08 64.7 136 29.4
C02p53420 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-08 64.7 228 19.7
C03p28750 Brassica napus HOM05D007568 ORTHO05D041881 1.1e-08 64.7 70 38.6
BolC3t15795H Brassica oleracea HOM05D007568 ORTHO05D041881 1.1e-08 64.7 70 38.6
C02p01020 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-08 64.3 166 23.5
BolC3t16020H Brassica oleracea HOM05D000353 ORTHO05D000174 1.4e-08 64.3 228 20.2
BcaC09g51435 Brassica carinata HOM05D000353 ORTHO05D000174 1.9e-08 63.9 231 22.9
C02p33390 Brassica napus HOM05D000353 ORTHO05D015401 1.9e-08 63.9 239 21.3
BolC1t01288H Brassica oleracea HOM05D000353 ORTHO05D000174 1.9e-08 63.9 231 22.9
A06p43450 Brassica napus HOM05D000353 ORTHO05D000174 2.5e-08 63.5 207 24.6
AL8G20950 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.2e-08 63.2 194 24.2
C01p49430 Brassica napus HOM05D007568 ORTHO05D009779 4.2e-08 62.8 58 48.3
Carub.0025s0005 Capsella rubella HOM05D000353 ORTHO05D021412 4.2e-08 62.8 149 23.5
BraA06t27230Z Brassica rapa HOM05D000353 ORTHO05D000174 5.5e-08 62.4 167 27.5
Carub.0001s3690 Capsella rubella HOM05D000353 ORTHO05D021412 7.1e-08 62.0 141 24.8
TPR.G15973 Trifolium pratense HOM05D001685 ORTHO05D007488 7.1e-08 62.0 197 24.4
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 1.2e-07 61.2 144 25.0
BcaB03g16430 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-07 61.2 233 21.9
BolC4t27105H Brassica oleracea HOM05D000353 ORTHO05D000174 1.2e-07 61.2 207 25.1
Carub.0005s0866 Capsella rubella HOM05D012762 ORTHO05D011313 1.6e-07 60.8 141 24.1
Carub.0016s0013 Capsella rubella HOM05D000353 ORTHO05D000174 2.1e-07 60.5 232 24.1
AL5G11810 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.7e-07 60.1 194 21.1
BcaB07g32743 Brassica carinata HOM05D000353 ORTHO05D000174 2.7e-07 60.1 151 25.2
C04p55780 Brassica napus HOM05D000353 ORTHO05D000174 3.5e-07 59.7 183 25.1
BcaNung00522 Brassica carinata HOM05D000353 ORTHO05D000174 4.6e-07 59.3 171 22.8
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.0e-07 58.9 133 26.3
C04p45580 Brassica napus HOM05D000353 ORTHO05D000174 6.0e-07 58.9 166 22.3
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 6.0e-07 58.9 204 24.0
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 7.9e-07 58.5 131 26.7
Carub.0012s0008 Capsella rubella HOM05D000353 ORTHO05D010269 7.9e-07 58.5 141 24.1
BcaC05g29145 Brassica carinata HOM05D000353 ORTHO05D000174 1.0e-06 58.2 130 25.4
Carub.0016s0005 Capsella rubella HOM05D000353 ORTHO05D000174 1.0e-06 58.2 135 24.4
C03p19550 Brassica napus HOM05D007568 ORTHO05D009779 1.3e-06 57.8 77 35.1
BolC4t23392H Brassica oleracea HOM05D007568 ORTHO05D009779 1.3e-06 57.8 37 62.2
AL1G50240 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.9e-06 56.2 163 21.5
BolC4t23854H Brassica oleracea HOM05D000353 ORTHO05D000174 6.7e-06 55.5 142 25.4
BolC7t42687H Brassica oleracea HOM05D007568 ORTHO05D009779 8.7e-06 55.1 61 42.6


User provided reference genes

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