Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 4.3e-198 694.5 365 100.0
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 1.7e-197 692.6 365 99.7
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 1.6e-192 676.0 365 97.3
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 3.3e-161 572.0 372 85.5
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 3.3e-161 572.0 372 85.5
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 1.3e-133 480.3 402 70.9
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 1.1e-116 424.1 392 63.0
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 3.3e-113 412.5 394 62.9
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 9.3e-108 394.4 387 63.3
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 1.6e-107 393.7 434 58.3
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 1.9e-97 360.1 379 60.2
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 3.3e-97 359.4 378 59.3
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 1.5e-89 334.0 381 59.8
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 1.1e-79 301.2 438 47.7
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 2.5e-76 290.0 174 87.4
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 8.0e-51 205.3 438 37.7
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 4.0e-50 203.0 432 38.7
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 5.7e-49 199.1 403 39.5
BcaB07g30967 Brassica carinata HOM05D006668 ORTHO05D008252 5.7e-49 199.1 311 46.9
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 7.5e-49 198.7 414 39.4
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 7.5e-49 198.7 425 36.7
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 1.8e-47 194.1 430 37.9
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 9.2e-47 191.8 427 36.3
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 4.5e-46 189.5 423 35.7
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 1.3e-45 188.0 334 41.0
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 5.0e-45 186.0 464 36.0
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 5.0e-45 186.0 408 35.0
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.1e-44 184.9 416 35.1
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 1.5e-44 184.5 427 36.1
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 1.9e-44 184.1 447 35.6
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 3.3e-44 183.3 449 36.1
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 3.3e-44 183.3 455 35.8
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 9.5e-44 181.8 416 35.1
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 1.2e-43 181.4 204 52.0
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 1.6e-43 181.0 478 35.1
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 2.8e-43 180.3 416 34.9
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 3.6e-43 179.9 438 36.8
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 3.6e-43 179.9 414 34.5
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 4.7e-43 179.5 414 34.5
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 8.0e-43 178.7 469 33.9
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 1.8e-42 177.6 458 34.1
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 3.4e-41 173.3 439 37.4
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 9.8e-41 171.8 387 39.8
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 1.7e-40 171.0 434 35.9
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 2.9e-40 170.2 426 34.5
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 6.4e-40 169.1 407 34.9
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 1.2e-38 164.9 382 36.6
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 3.5e-38 163.3 420 35.5
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 4.6e-38 162.9 430 34.0
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 7.8e-38 162.2 450 33.6
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 7.8e-38 162.2 454 35.2
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 1.0e-37 161.8 442 33.3
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 3.9e-37 159.8 446 34.1
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 5.0e-37 159.5 444 33.6
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 8.6e-37 158.7 412 34.5
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 1.1e-36 158.3 451 33.9
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 3.3e-36 156.8 415 35.4
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 5.6e-36 156.0 424 35.1
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 1.6e-35 154.5 420 35.2
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 1.6e-35 154.5 420 35.2
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 2.1e-35 154.1 417 34.1
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 2.8e-35 153.7 417 33.1
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 6.2e-35 152.5 416 34.4
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 8.0e-35 152.1 434 32.5
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 2.3e-34 150.6 411 33.1
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 6.8e-34 149.1 424 33.0
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 8.9e-34 148.7 423 33.6
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 2.6e-33 147.1 429 32.4
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 5.8e-33 146.0 383 34.5
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 7.5e-33 145.6 435 32.4
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 7.5e-33 145.6 404 33.9
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 1.7e-32 144.4 420 32.4
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 3.7e-32 143.3 335 35.5
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 1.1e-31 141.7 411 33.1
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 2.4e-31 140.6 394 33.8
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 4.1e-31 139.8 444 29.5
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 5.4e-31 139.4 424 32.8
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 5.4e-31 139.4 496 31.2
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 1.2e-30 138.3 169 50.3
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 2.0e-30 137.5 389 33.7
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 2.7e-30 137.1 320 35.3
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 7.8e-30 135.6 377 35.0
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 7.8e-30 135.6 388 33.0
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 3.0e-29 133.7 448 31.7
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 1.5e-28 131.3 455 30.1
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 2.5e-28 130.6 316 34.8
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 1.2e-27 128.3 434 29.7
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 2.1e-27 127.5 428 31.1
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 1.4e-26 124.8 446 29.4
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 5.2e-26 122.9 458 31.2
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 2.0e-25 120.9 403 30.8
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 6.4e-24 115.9 435 29.4
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 1.3e-21 108.2 427 29.7
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 4.3e-20 103.2 427 29.3
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 1.2e-19 101.7 296 31.8
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 2.8e-19 100.5 135 48.9
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 1.8e-18 97.8 487 26.9
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 3.1e-18 97.1 194 37.6
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 3.1e-18 97.1 376 30.6
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 8.9e-18 95.5 132 47.7
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 3.4e-17 93.6 259 29.7
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 3.7e-16 90.1 483 27.1
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 2.4e-15 87.4 288 31.6
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 2.3e-13 80.9 329 28.9
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 2.6e-09 67.4 269 29.7
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 6.4e-08 62.8 108 43.5
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 1.4e-07 61.6 290 27.2
Sabra07G0109400 Salix brachista HOM05D006668 ORTHO05D008252 2.4e-07 60.8 76 42.1


User provided reference genes

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