Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 1.2e-80 303.1 157 100.0
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 1.2e-80 303.1 157 100.0
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 1.9e-78 295.8 157 97.5
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 4.3e-78 294.7 157 97.5
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 1.4e-76 289.7 157 94.9
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 1.9e-70 269.2 159 89.9
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 9.6e-70 266.9 157 92.4
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 2.2e-66 255.8 157 87.3
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 3.8e-66 255.0 158 88.6
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 2.5e-65 252.3 160 86.2
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 6.0e-64 247.7 159 85.5
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 1.8e-60 236.1 160 81.9
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 2.9e-58 228.8 159 78.0
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 4.3e-54 214.9 163 74.2
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 2.2e-53 212.6 157 73.9
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 1.4e-52 209.9 148 75.7
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 5.3e-52 208.0 127 84.3
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 6.9e-52 207.6 126 87.3
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 6.9e-52 207.6 146 75.3
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 9.1e-52 207.2 157 72.0
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 2.0e-51 206.1 163 72.4
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 2.0e-51 206.1 160 72.5
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 2.6e-51 205.7 157 72.6
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 3.4e-51 205.3 163 72.4
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 3.4e-51 205.3 163 72.4
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.4e-51 205.3 158 72.2
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 4.5e-51 204.9 158 72.2
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 5.9e-51 204.5 116 91.4
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 5.9e-51 204.5 128 83.6
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 5.9e-51 204.5 157 70.7
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 7.7e-51 204.1 157 72.6
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 7.7e-51 204.1 117 90.6
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 1.0e-50 203.8 153 74.5
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 1.3e-50 203.4 117 88.9
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 1.7e-50 203.0 157 72.0
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.7e-50 203.0 157 70.1
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 2.2e-50 202.6 157 72.6
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 2.2e-50 202.6 157 72.0
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 2.9e-50 202.2 155 72.3
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 2.9e-50 202.2 153 74.5
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 2.9e-50 202.2 157 70.7
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 2.9e-50 202.2 163 70.6
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 3.8e-50 201.8 157 70.7
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 3.8e-50 201.8 158 72.2
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 3.8e-50 201.8 157 72.0
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 3.8e-50 201.8 163 71.8
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 3.8e-50 201.8 157 72.0
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 3.8e-50 201.8 116 90.5
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 5.0e-50 201.4 157 71.3
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 5.0e-50 201.4 130 82.3
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 6.5e-50 201.1 116 86.2
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 8.5e-50 200.7 157 72.0
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 8.5e-50 200.7 157 70.7
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 8.5e-50 200.7 158 72.8
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 8.5e-50 200.7 157 72.0
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 1.1e-49 200.3 126 83.3
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 1.1e-49 200.3 159 70.4
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 1.1e-49 200.3 157 71.3
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 1.9e-49 199.5 161 70.2
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 1.9e-49 199.5 157 69.4
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 1.9e-49 199.5 117 88.0
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 2.5e-49 199.1 158 72.2
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 2.5e-49 199.1 157 68.8
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 3.2e-49 198.7 116 87.9
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 3.2e-49 198.7 129 80.6
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 3.2e-49 198.7 159 71.1
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 4.2e-49 198.4 162 69.8
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 4.2e-49 198.4 116 87.1
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 4.2e-49 198.4 116 86.2
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 5.5e-49 198.0 158 71.5
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 5.5e-49 198.0 145 73.1
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 9.4e-49 197.2 157 70.7
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 2.1e-48 196.1 116 85.3
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 3.6e-48 195.3 115 86.1
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 6.1e-48 194.5 160 70.0
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 6.1e-48 194.5 157 70.1
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 1.0e-47 193.7 157 69.4
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 1.0e-47 193.7 127 81.1
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.4e-47 193.4 159 69.2
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 1.4e-47 193.4 158 70.9
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 8.8e-47 190.7 135 77.0
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 1.5e-46 189.9 116 87.9
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 3.3e-46 188.7 157 68.2
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 3.3e-46 188.7 157 68.2
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 3.3e-46 188.7 164 66.5
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 3.3e-46 188.7 125 79.2
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 3.3e-46 188.7 117 81.2
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 5.7e-46 188.0 157 65.6
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.5e-43 179.9 157 65.6
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 6.5e-42 174.5 139 66.9
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 6.7e-39 164.5 125 67.2
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 4.8e-37 158.3 117 69.2
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 3.1e-36 155.6 104 73.1
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 5.3e-36 154.8 131 64.9
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 5.9e-35 151.4 112 75.9
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 1.0e-34 150.6 103 76.7
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 2.9e-34 149.1 105 74.3
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 8.5e-34 147.5 129 66.7
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 1.1e-33 147.1 126 65.9
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 1.5e-33 146.7 99 75.8
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 1.5e-33 146.7 99 78.8
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 2.5e-33 146.0 116 71.6
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 3.2e-33 145.6 122 68.9
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 5.5e-33 144.8 126 65.1
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 7.2e-33 144.4 128 65.6
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 2.7e-32 142.5 96 78.1
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 2.0e-30 136.3 98 73.5
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 5.3e-28 128.3 138 55.1
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.3e-13 80.5 64 71.9
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 6.3e-13 78.2 110 43.6
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.6e-11 73.6 68 51.5


User provided reference genes

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