Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p24970 Brassica napus HOM05D007693 ORTHO05D002086 9.6e-69 263.5 141 100.0
BcaC01g00556 Brassica carinata HOM05D007693 ORTHO05D002086 2.7e-63 245.4 144 93.1
C07p06000 Brassica napus HOM05D007693 ORTHO05D002086 3.5e-63 245.0 144 93.1
BolC7t41011H Brassica oleracea HOM05D007693 ORTHO05D002086 3.5e-63 245.0 144 93.1
BcaB02g06468 Brassica carinata HOM05D007693 ORTHO05D002086 7.9e-39 164.1 129 58.9
BcaB04g17832 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-36 156.8 123 70.7
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.0e-34 149.4 139 63.3
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.0e-34 149.4 139 63.3
BcaB06g26026 Brassica carinata HOM05D007693 ORTHO05D002086 1.9e-32 142.9 145 64.1
AT2G06265 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 4.3e-29 131.7 133 54.1
Thhalv10003330m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 7.4e-29 131.0 144 59.0
AT2G07505 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 2.8e-28 129.0 139 58.3
BcaB05g22684 Brassica carinata HOM05D007693 ORTHO05D002086 5.3e-27 124.8 141 48.2
Sp7g02510 Schrenkiella parvula HOM05D007693 ORTHO05D002086 5.3e-27 124.8 140 49.3
Sp7g12150 Schrenkiella parvula HOM05D007693 ORTHO05D002086 6.9e-27 124.4 140 49.3
BcaB04g20521 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-25 120.2 141 53.2
Carub.0003s3077 Capsella rubella HOM05D007693 ORTHO05D002086 1.1e-24 117.1 144 51.4
BraA10t42989Z Brassica rapa HOM05D007693 ORTHO05D002086 3.2e-24 115.5 144 46.5
Thhalv10017745m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 3.6e-23 112.1 126 49.2
BcaC09g50151 Brassica carinata HOM05D007693 ORTHO05D002086 4.6e-23 111.7 76 94.7
CARHR108830 Cardamine hirsuta HOM05D007693 ORTHO05D002086 1.0e-22 110.5 148 54.1
CARHR055980 Cardamine hirsuta HOM05D007693 ORTHO05D002086 3.0e-22 109.0 109 54.1
Thhalv10002853m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.3e-20 103.6 125 48.8
BraA06t25204Z Brassica rapa HOM05D007693 ORTHO05D002086 2.4e-19 99.4 75 60.0
Thhalv10012038m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 4.1e-19 98.6 131 37.4
Thhalv10029337m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 5.3e-19 98.2 75 62.7
AL22U10020 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.6e-18 95.9 142 46.5
AL2G18820 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.3e-17 93.6 142 43.0
AL4G16420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.3e-17 93.6 142 43.0
Carub.0008s0706 Capsella rubella HOM05D007693 ORTHO05D002086 2.5e-16 89.4 87 54.0
BcaC05g28311 Brassica carinata HOM05D007693 ORTHO05D002086 5.5e-16 88.2 138 47.8
Thhalv10022239m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 5.5e-16 88.2 119 45.4
BraA06t24544Z Brassica rapa HOM05D007693 ORTHO05D002086 7.2e-16 87.8 107 45.8
BcaB04g16994 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-15 87.0 142 38.0
BcaC05g25266 Brassica carinata HOM05D007693 ORTHO05D002086 1.2e-15 87.0 121 38.8
BcaB05g22932 Brassica carinata HOM05D007693 ORTHO05D002086 2.1e-15 86.3 137 34.3
Thhalv10011039m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.1e-15 86.3 131 42.0
BcaB02g10221 Brassica carinata HOM05D007693 ORTHO05D002086 4.7e-15 85.1 104 43.3
BcaC03g14636 Brassica carinata HOM05D007693 ORTHO05D002086 6.1e-15 84.7 104 43.3
BcaB04g17442 Brassica carinata HOM05D007693 ORTHO05D002086 1.0e-14 84.0 102 43.1
Thhalv10003362m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.0e-14 84.0 126 41.3
BcaC05g29744 Brassica carinata HOM05D007693 ORTHO05D002086 3.0e-14 82.4 90 50.0
BcaC06g32504 Brassica carinata HOM05D007693 ORTHO05D002086 3.0e-14 82.4 90 50.0
BcaC03g15315 Brassica carinata HOM05D007693 ORTHO05D002086 3.9e-14 82.0 83 47.0
BcaB05g24592 Brassica carinata HOM05D007693 ORTHO05D002086 8.8e-14 80.9 55 60.0
BcaB06g29566 Brassica carinata HOM05D007693 ORTHO05D002086 8.8e-14 80.9 55 60.0
BcaC06g35712 Brassica carinata HOM05D007693 ORTHO05D002086 8.8e-14 80.9 114 41.2
BolC4t28282H Brassica oleracea HOM05D007693 ORTHO05D002086 1.1e-13 80.5 143 39.2
SpUn1230_0020 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.6e-13 79.3 123 35.8
BcaB08g34442 Brassica carinata HOM05D007693 ORTHO05D002086 3.3e-13 79.0 64 59.4
BcaC02g11475 Brassica carinata HOM05D007693 ORTHO05D002086 3.3e-13 79.0 139 36.7
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 3.3e-13 79.0 107 39.3
BcaC08g44290 Brassica carinata HOM05D007693 ORTHO05D002086 4.4e-13 78.6 83 47.0
BcaC06g36209 Brassica carinata HOM05D000977 ORTHO05D002086 9.7e-13 77.4 114 38.6
BolC3t20530H Brassica oleracea HOM05D007693 ORTHO05D002086 9.7e-13 77.4 55 58.2
BcaB06g27481 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-12 77.0 59 54.2
BolC8t47992H Brassica oleracea HOM05D007693 ORTHO05D002086 1.3e-12 77.0 83 44.6
BcaC05g28526 Brassica carinata HOM05D000977 ORTHO05D002086 1.7e-12 76.6 137 35.8
Sp5g15320 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.8e-12 75.9 109 42.2
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 8.2e-12 74.3 59 55.9
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 1.4e-11 73.6 104 38.5
C06p36600 Brassica napus HOM05D007693 ORTHO05D002086 2.4e-11 72.8 109 42.2
THA.LOC104806974 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 5.3e-11 71.6 82 41.5
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 7.0e-11 71.2 100 38.0
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 7.0e-11 71.2 100 38.0
BcaB06g27935 Brassica carinata HOM05D026000 ORTHO05D002086 9.1e-11 70.9 104 51.9
Sp6g12290 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.2e-10 70.5 108 41.7
BraA05t22114Z Brassica rapa HOM05D007693 ORTHO05D002086 1.6e-10 70.1 100 38.0
BcaB08g35719 Brassica carinata HOM05D007693 ORTHO05D002086 2.0e-10 69.7 120 37.5
BcaC06g36717 Brassica carinata HOM05D000977 ORTHO05D002086 7.7e-10 67.8 136 33.1
Sp1g34950 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.0e-09 67.4 88 42.0
THA.LOC104817596 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 1.3e-09 67.0 69 43.5
BcaC07g37014 Brassica carinata HOM05D007693 ORTHO05D002086 2.9e-09 65.9 59 49.2
Sp5g21400 Schrenkiella parvula HOM05D018387 ORTHO05D002086 8.5e-09 64.3 98 37.8
Sp6g08580 Schrenkiella parvula HOM05D018387 ORTHO05D002086 8.5e-09 64.3 76 43.4
C04p45250 Brassica napus HOM05D026000 ORTHO05D032826 1.1e-08 63.9 68 52.9
BolC4t26107H Brassica oleracea HOM05D026000 ORTHO05D032826 1.1e-08 63.9 68 52.9
Sp7g13130 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.1e-08 63.9 88 39.8
C05p36680 Brassica napus HOM05D007693 ORTHO05D002086 1.9e-08 63.2 76 42.1
BraA10t43661Z Brassica rapa HOM05D007693 ORTHO05D002086 1.9e-08 63.2 47 53.2
BcaNung00058 Brassica carinata HOM05D007462 ORTHO05D011074 2.5e-08 62.8 82 34.1
Aa31LG2G13790 Aethionema arabicum HOM05D007462 ORTHO05D002086 3.2e-08 62.4 82 36.6
C05p48940 Brassica napus HOM05D007693 ORTHO05D002086 4.2e-08 62.0 76 40.8
BcaC02g09659 Brassica carinata HOM05D026000 ORTHO05D032826 5.5e-08 61.6 83 54.2
THA.LOC104818502 Tarenaya hassleriana HOM05D007693 ORTHO05D002086 9.4e-08 60.8 55 43.6
AL6G38570 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.2e-07 60.5 147 36.7
Sp7g03170 Schrenkiella parvula HOM05D018387 ORTHO05D002086 1.6e-07 60.1 91 39.6
THA.LOC104804713 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 1.6e-07 60.1 77 35.1
THA.LOC104808386 Tarenaya hassleriana HOM05D028755 ORTHO05D002086 1.6e-07 60.1 80 47.5
BcaC05g28653 Brassica carinata HOM05D007462 ORTHO05D011074 2.1e-07 59.7 82 37.8
BcaC01g05867 Brassica carinata HOM05D007462 ORTHO05D011074 2.7e-07 59.3 82 37.8
BcaC04g22910 Brassica carinata HOM05D007462 ORTHO05D011074 2.7e-07 59.3 82 37.8
BcaC07g38352 Brassica carinata HOM05D007462 ORTHO05D011074 2.7e-07 59.3 82 37.8
BolC1t02623H Brassica oleracea HOM05D007462 ORTHO05D011074 2.7e-07 59.3 82 37.8
THA.LOC104803181 Tarenaya hassleriana HOM05D028755 ORTHO05D002086 2.7e-07 59.3 68 45.6
AT5G15690 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 3.6e-07 58.9 68 36.8
BcaB05g23148 Brassica carinata HOM05D007693 ORTHO05D002086 3.6e-07 58.9 55 47.3
BcaC04g20658 Brassica carinata HOM05D007462 ORTHO05D002086 4.7e-07 58.5 57 43.9
AT3G30165 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 8.0e-07 57.8 73 39.7
AT4G04775 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 8.0e-07 57.8 68 36.8
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 8.0e-07 57.8 58 46.6
BcaC05g26662 Brassica carinata HOM05D007462 ORTHO05D011074 8.0e-07 57.8 70 38.6
BcaC08g45815 Brassica carinata HOM05D007462 ORTHO05D011074 8.0e-07 57.8 82 36.6
BcaC03g14143 Brassica carinata HOM05D007462 ORTHO05D011074 1.0e-06 57.4 81 37.0
BcaC06g34269 Brassica carinata HOM05D007462 ORTHO05D002086 1.4e-06 57.0 57 43.9
BcaC07g38572 Brassica carinata HOM05D007462 ORTHO05D011074 1.4e-06 57.0 82 35.4
CARHR284490 Cardamine hirsuta HOM05D000589 ORTHO05D001885 1.4e-06 57.0 139 33.8
BcaB04g20307 Brassica carinata HOM05D007462 ORTHO05D002086 1.8e-06 56.6 51 47.1
BcaC06g33699 Brassica carinata HOM05D007462 ORTHO05D011074 1.8e-06 56.6 70 37.1
BcaB08g34481 Brassica carinata HOM05D000675 ORTHO05D002086 2.3e-06 56.2 98 31.6
BolC5t32402H Brassica oleracea HOM05D007693 ORTHO05D002086 2.3e-06 56.2 72 40.3
CARHR264280 Cardamine hirsuta HOM05D007462 ORTHO05D011074 3.0e-06 55.8 53 49.1
A06p23400 Brassica napus HOM05D000675 ORTHO05D002086 4.0e-06 55.5 83 31.3
BcaC01g03692 Brassica carinata HOM05D007462 ORTHO05D002086 5.2e-06 55.1 93 35.5
BcaC02g11404 Brassica carinata HOM05D000675 ORTHO05D002086 5.2e-06 55.1 73 34.2
BcaC03g14861 Brassica carinata HOM05D007462 ORTHO05D011074 5.2e-06 55.1 70 37.1
BcaC05g27351 Brassica carinata HOM05D000675 ORTHO05D002086 5.2e-06 55.1 69 37.7
BcaC09g49265 Brassica carinata HOM05D007462 ORTHO05D002086 5.2e-06 55.1 99 31.3
C06p13560 Brassica napus HOM05D000675 ORTHO05D032734 5.2e-06 55.1 84 34.5
AT1G48285 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 6.7e-06 54.7 103 35.9
BcaC05g29029 Brassica carinata HOM05D000675 ORTHO05D002086 6.7e-06 54.7 69 36.2
BcaB07g33925 Brassica carinata HOM05D000888 ORTHO05D000740 8.8e-06 54.3 58 41.4
BcaC03g16220 Brassica carinata HOM05D000675 ORTHO05D002086 8.8e-06 54.3 67 35.8
BcaC05g28255 Brassica carinata HOM05D000675 ORTHO05D002086 8.8e-06 54.3 67 35.8
BcaC06g34450 Brassica carinata HOM05D000675 ORTHO05D002086 8.8e-06 54.3 97 29.9
BcaC06g36214 Brassica carinata HOM05D000675 ORTHO05D002086 8.8e-06 54.3 67 35.8
BcaC08g43955 Brassica carinata HOM05D000675 ORTHO05D032734 8.8e-06 54.3 83 34.9
BcaC09g50385 Brassica carinata HOM05D000675 ORTHO05D002086 8.8e-06 54.3 73 35.6
C04p26820 Brassica napus HOM05D000675 ORTHO05D002086 8.8e-06 54.3 83 31.3
BolC4t23471H Brassica oleracea HOM05D007462 ORTHO05D002086 8.8e-06 54.3 53 45.3
BolC6t36520H Brassica oleracea HOM05D000675 ORTHO05D032734 8.8e-06 54.3 83 34.9


User provided reference genes

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