Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p23160 Brassica napus HOM05D008299 ORTHO05D010400 1.7e-38 162.2 78 100.0
C09p24750 Brassica napus HOM05D008299 ORTHO05D010400 1.7e-38 162.2 78 100.0
BolSC29t60493H Brassica oleracea HOM05D008299 ORTHO05D010400 1.7e-38 162.2 78 100.0
BolSC37t60783H Brassica oleracea HOM05D008299 ORTHO05D010400 1.7e-38 162.2 78 100.0
BolSC44t60837H Brassica oleracea HOM05D008299 ORTHO05D010400 1.7e-38 162.2 78 100.0
BolSC49t61213H Brassica oleracea HOM05D008299 ORTHO05D010400 1.7e-38 162.2 78 100.0
BraSC103t45416Z Brassica rapa HOM05D008299 ORTHO05D010400 1.7e-38 162.2 78 100.0
BraSC103t45438Z Brassica rapa HOM05D008299 ORTHO05D010400 1.7e-38 162.2 78 100.0
BraSC143t45671Z Brassica rapa HOM05D008299 ORTHO05D010400 1.7e-38 162.2 78 100.0
BraSC25t45895Z Brassica rapa HOM05D008299 ORTHO05D010400 1.7e-38 162.2 78 100.0
BraSC48t46294Z Brassica rapa HOM05D008299 ORTHO05D010400 3.5e-36 154.5 78 96.2
BraSC48t46311Z Brassica rapa HOM05D008299 ORTHO05D010400 3.5e-36 154.5 78 96.2
BraSC48t46344Z Brassica rapa HOM05D008299 ORTHO05D010400 3.5e-36 154.5 78 96.2
ATCG00870 Arabidopsis thaliana HOM05D008299 ORTHO05D010400 5.9e-36 153.7 78 94.9
ATCG01270 Arabidopsis thaliana HOM05D008299 ORTHO05D010400 5.9e-36 153.7 78 94.9
CARHR282310 Cardamine hirsuta HOM05D008299 ORTHO05D010400 5.9e-36 153.7 78 94.9
CARHR282550 Cardamine hirsuta HOM05D008299 ORTHO05D010400 5.9e-36 153.7 78 94.9
Thhalv10012154m.g Eutrema salsugineum HOM05D008299 ORTHO05D010400 5.9e-36 153.7 78 94.9
Thhalv10003089m.g Eutrema salsugineum HOM05D008299 ORTHO05D010400 7.7e-36 153.3 78 94.9
AL9U12040 Arabidopsis lyrata HOM05D008299 ORTHO05D010400 5.5e-34 147.1 72 97.2
BolSC45t60893H Brassica oleracea HOM05D008299 ORTHO05D010400 7.2e-26 120.2 56 100.0
MD11G1013500 Malus domestica HOM05D008299 ORTHO05D010400 2.4e-21 105.1 62 83.9
BolC2t08923H Brassica oleracea HOM05D008299 ORTHO05D010400 9.1e-21 103.2 49 98.0
BraSC138t45545Z Brassica rapa HOM05D008299 ORTHO05D010400 7.2e-18 93.6 46 93.5
BraSC59t46562Z Brassica rapa HOM05D008299 ORTHO05D010400 1.6e-17 92.4 46 93.5
BraSC58t46447Z Brassica rapa HOM05D008299 ORTHO05D010400 2.1e-17 92.0 43 100.0
BolSC29t60562H Brassica oleracea HOM05D008299 ORTHO05D010400 2.3e-16 88.6 41 100.0
BraSC54t46357Z Brassica rapa HOM05D008299 ORTHO05D010400 6.8e-16 87.0 44 93.2
Gohir.1Z050502 Gossypium hirsutum HOM05D008299 ORTHO05D010400 6.8e-16 87.0 44 93.2
Gohir.D02G117444 Gossypium hirsutum HOM05D008299 ORTHO05D010400 6.8e-16 87.0 44 93.2
CSS0008439 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 2.4e-13 78.6 51 72.5
CSS0021182 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 2.4e-13 78.6 51 72.5
CAN.G1298.15 Capsicum annuum HOM05D008299 ORTHO05D010400 1.2e-12 76.3 50 72.0
CAN.G343.2 Capsicum annuum HOM05D000445 ORTHO05D010400 1.2e-12 76.3 50 72.0
CAN.G1648.16 Capsicum annuum HOM05D008299 ORTHO05D010400 2.7e-12 75.1 50 70.0
CAN.G100.36 Capsicum annuum HOM05D008299 ORTHO05D010400 1.0e-11 73.2 50 70.0
Solyc11g021080.3 Solanum lycopersicum HOM05D008299 ORTHO05D010400 2.3e-11 72.0 50 68.0
CAN.G219.11 Capsicum annuum HOM05D000445 ORTHO05D010400 2.9e-11 71.6 50 68.0
CAN.G129.17 Capsicum annuum HOM05D008299 ORTHO05D010400 3.9e-11 71.2 60 63.3
CAN.G719.1 Capsicum annuum HOM05D008299 ORTHO05D010400 1.5e-10 69.3 42 73.8
Solyc01g017080.2 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.9e-10 68.9 47 66.0
CAN.G1178.2 Capsicum annuum HOM05D008299 ORTHO05D010400 3.3e-10 68.2 34 88.2
SGA_v2.0_scaffold379G50347 Striga asiatica HOM05D008299 ORTHO05D010400 7.3e-10 67.0 60 56.7
Solyc02g011920.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.2e-09 66.2 50 62.0
Hma1.2p1_0005F.1_g004230 Hydrangea macrophylla HOM05D000083 ORTHO05D003582 7.5e-07 57.0 24 100.0
MD17G1255700 Malus domestica HOM05D008299 ORTHO05D010400 2.9e-06 55.1 31 83.9


User provided reference genes

Program Settings