Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 1.2e-140 503.1 245 100.0
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 1.2e-140 503.1 245 100.0
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 1.2e-140 503.1 245 100.0
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 1.2e-140 503.1 245 100.0
BraSC59t46558Z Brassica rapa HOM05D000963 ORTHO05D005131 2.6e-114 415.6 208 97.6
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 3.8e-113 411.8 204 98.5
LjContig00319g0011411 Lotus japonicus HOM05D000963 ORTHO05D005131 5.7e-85 318.2 258 69.4
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 1.5e-77 293.5 161 90.1
VMungo0464G1437 Vigna mungo HOM05D000963 ORTHO05D005131 3.7e-76 288.9 244 66.4
VMungo0720G2312 Vigna mungo HOM05D000963 ORTHO05D005131 2.8e-68 262.7 180 76.1
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 7.0e-59 231.5 145 83.4
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 7.0e-59 231.5 127 91.3
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 7.0e-59 231.5 127 91.3
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 1.2e-55 220.7 199 64.3
SHI36890 Sapria himalayana HOM05D000963 ORTHO05D005131 2.0e-50 203.4 129 79.8
VMungo1215G3364 Vigna mungo HOM05D001592 ORTHO05D001533 1.2e-45 187.6 88 100.0
Glyma.05G084600 Glycine max HOM05D000963 ORTHO05D005131 9.8e-45 184.5 164 64.6
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.9e-44 182.2 97 94.8
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.9e-44 182.2 97 94.8
Lsat_1_v5_gn_9_35301 Lactuca sativa HOM05D000963 ORTHO05D005131 1.8e-43 180.3 171 56.7
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 4.1e-43 179.1 97 93.8
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 4.1e-43 179.1 97 93.8
Medtr8g040260 Medicago truncatula HOM05D000963 ORTHO05D005131 3.5e-42 176.0 145 66.9
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 1.3e-41 174.1 190 58.4
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 3.0e-41 172.9 97 90.7
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.6e-41 171.8 97 90.7
Sed0026848 Sechium edule HOM05D000963 ORTHO05D005131 6.6e-41 171.8 94 89.4
Sopen11g020200 Solanum pennellii HOM05D000004 ORTHO05D000002 8.6e-41 171.4 121 78.5
arahy.Tifrunner.gnm1.ann1.A049RL Arachis hypogaea HOM05D000963 ORTHO05D005131 4.3e-40 169.1 93 88.2
Sopen08g004620 Solanum pennellii HOM05D001396 ORTHO05D000493 1.6e-39 167.2 86 95.3
arahy.Tifrunner.gnm1.ann1.ZFFY2U Arachis hypogaea HOM05D000963 ORTHO05D005131 1.8e-38 163.7 143 66.4
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 2.3e-38 163.3 97 88.7
Medtr3g035650 Medicago truncatula HOM05D000963 ORTHO05D005131 4.4e-37 159.1 81 95.1
Manes.02G203601 Manihot esculenta HOM05D000963 ORTHO05D005131 2.4e-35 153.3 140 62.1
arahy.Tifrunner.gnm1.ann1.LAST4K Arachis hypogaea HOM05D000963 ORTHO05D005131 7.0e-35 151.8 134 62.7
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.7e-33 147.1 124 66.9
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.0e-33 146.4 85 87.1
arahy.Tifrunner.gnm1.ann1.LWFR1C Arachis hypogaea HOM05D000963 ORTHO05D005131 5.0e-33 145.6 103 74.8
CsaV3_4G036830 Cucumis sativus L. HOM05D000963 ORTHO05D005131 1.8e-30 137.1 79 82.3
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 6.8e-30 135.2 166 52.4
arahy.Tifrunner.gnm1.ann1.9M10FC Arachis hypogaea HOM05D000940 ORTHO05D000782 8.9e-30 134.8 82 82.9
arahy.Tifrunner.gnm1.ann1.SH46T5 Arachis hypogaea HOM05D000963 ORTHO05D005131 1.5e-29 134.0 96 72.9
SGA_v2.0_scaffold140G35502 Striga asiatica HOM05D000963 ORTHO05D005131 3.7e-28 129.4 66 92.4
Sc25g0002260 Simmondsia chinensis HOM05D000963 ORTHO05D005131 8.3e-28 128.3 88 73.9
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.9e-27 127.1 180 47.8
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.4e-27 126.7 97 72.2
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 2.4e-27 126.7 97 72.2
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 2.4e-27 126.7 97 72.2
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 2.4e-27 126.7 97 72.2
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 2.4e-27 126.7 97 72.2
Solyc00g500039.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 7.1e-27 125.2 72 86.1
Solyc00g500044.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 7.1e-27 125.2 72 86.1
Solyc00g500083.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 7.1e-27 125.2 72 86.1
Solyc00g500301.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 7.1e-27 125.2 72 86.1
Solyc00g500325.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 7.1e-27 125.2 72 86.1
Migut.E00963 Erythranthe guttata HOM05D000963 ORTHO05D005131 3.0e-25 119.8 64 84.4
arahy.Tifrunner.gnm1.ann1.7DQW64 Arachis hypogaea HOM05D000963 ORTHO05D005131 1.5e-24 117.5 60 91.7
arahy.Tifrunner.gnm1.ann1.ZJEP1E Arachis hypogaea HOM05D000963 ORTHO05D011791 1.9e-24 117.1 62 91.9
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 1.6e-23 114.0 124 57.3
MBI08_g48228_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 2.1e-23 113.6 90 68.9
Phvul.002G028400 Phaseolus vulgaris HOM05D000963 ORTHO05D005131 3.6e-23 112.8 82 70.7
Sopen01g026990 Solanum pennellii HOM05D000963 ORTHO05D005131 4.7e-23 112.5 72 79.2
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.4e-22 110.9 124 56.5
arahy.Tifrunner.gnm1.ann1.GV9JXL Arachis hypogaea HOM05D000743 ORTHO05D005131 3.1e-22 109.8 56 92.9
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 8.9e-22 108.2 52 100.0
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 4.4e-21 105.9 112 57.1
Lsat_1_v5_gn_4_99780 Lactuca sativa HOM05D000103 ORTHO05D000049 1.7e-20 104.0 48 97.9
arahy.Tifrunner.gnm1.ann1.J9XL5M Arachis hypogaea HOM05D000963 ORTHO05D005131 2.2e-20 103.6 52 96.2
CDE02G2642 Ceratophyllum demersum HOM05D000963 ORTHO05D005131 6.4e-20 102.1 153 46.4
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.1e-19 101.3 161 44.7
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 2.4e-19 100.1 112 54.5
HPP92_028387 Vanilla planifolia HOM05D000963 ORTHO05D005131 4.1e-19 99.4 54 88.9
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 5.4e-19 99.0 53 88.7
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 5.4e-19 99.0 124 48.4
BraSC59t46511Z Brassica rapa HOM05D000963 ORTHO05D005131 1.6e-18 97.4 44 100.0
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.6e-18 97.4 100 55.0
Sopen10g016560 Solanum pennellii HOM05D000963 ORTHO05D005131 2.7e-18 96.7 116 49.1
arahy.Tifrunner.gnm1.ann1.BMCQ1I Arachis hypogaea HOM05D000963 ORTHO05D005131 1.7e-17 94.0 46 91.3
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.7e-17 94.0 117 57.3
arahy.Tifrunner.gnm1.ann1.JE53Y0 Arachis hypogaea HOM05D000963 ORTHO05D005131 3.0e-17 93.2 48 93.8
Oeu048363.1 Olea europaea HOM05D000963 ORTHO05D018542 3.0e-17 93.2 64 71.9
TPR.G8529 Trifolium pratense HOM05D000060 ORTHO05D000082 8.7e-17 91.7 54 85.2
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 2.8e-15 86.7 105 57.1
Gorai.002G201900 Gossypium raimondii HOM05D000963 ORTHO05D005131 4.7e-15 85.9 44 86.4
Potri.002G073450 Populus trichocarpa HOM05D000963 ORTHO05D005131 4.7e-15 85.9 128 44.5
SabraMtG0005800 Salix brachista HOM05D000963 ORTHO05D011791 1.4e-14 84.3 108 50.9
Gohir.D01G162740 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.1e-14 83.2 44 84.1
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 5.2e-14 82.4 116 44.0
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 9.0e-14 81.6 47 89.4
arahy.Tifrunner.gnm1.ann1.D10MHU Arachis hypogaea HOM05D000963 ORTHO05D005131 2.0e-13 80.5 44 90.9
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 2.0e-13 80.5 53 77.4
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 2.6e-13 80.1 157 38.9
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 2.6e-13 80.1 45 91.1
TAR633G0621 Trochodendron aralioides HOM05D000963 ORTHO05D005131 2.6e-13 80.1 45 91.1
SGA_v2.0_scaffold126G33874 Striga asiatica HOM05D000963 ORTHO05D005131 4.4e-13 79.3 91 56.0
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 4.4e-13 79.3 45 88.9
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 4.4e-13 79.3 45 88.9
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 4.4e-13 79.3 45 88.9
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.4e-13 79.3 45 88.9
BraSC138t45524Z Brassica rapa HOM05D000963 ORTHO05D005131 7.6e-13 78.6 36 97.2
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 9.9e-13 78.2 61 70.5
Lsat_1_v5_gn_4_145420 Lactuca sativa HOM05D000963 ORTHO05D005131 1.3e-12 77.8 44 90.9
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 2.2e-12 77.0 44 88.6
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 2.2e-12 77.0 45 86.7
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 2.2e-12 77.0 44 88.6
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.2e-12 77.0 44 88.6
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.2e-12 77.0 44 88.6
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 2.9e-12 76.6 45 84.4
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 3.8e-12 76.3 36 97.2
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.1e-11 74.7 45 84.4
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 1.4e-11 74.3 112 47.3
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.9e-11 73.9 60 70.0
Gorai.003G182700 Gossypium raimondii HOM05D000963 ORTHO05D005131 1.9e-11 73.9 43 79.1
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.9e-11 73.9 45 82.2
Gohir.A12G053150 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.4e-11 73.6 116 42.2
Gorai.007G252600 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.4e-11 73.6 33 100.0
SHI36889 Sapria himalayana HOM05D000963 ORTHO05D005131 2.4e-11 73.6 40 92.5
Sopen10g017030 Solanum pennellii HOM05D042347 ORTHO05D014730 2.4e-11 73.6 36 88.9
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 4.2e-11 72.8 41 85.4
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.7e-10 70.1 51 70.6
Solyc01g017050.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 3.5e-10 69.7 41 87.8
vmacro09302 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 6.0e-10 68.9 41 82.9
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.0e-09 68.2 45 82.2
TPR.G33662 Trifolium pratense HOM05D004957 ORTHO05D006741 1.3e-09 67.8 35 88.6
Gorai.008G144300 Gossypium raimondii HOM05D000963 ORTHO05D005131 3.9e-09 66.2 49 67.3
Oeu014166.1 Olea europaea HOM05D000963 ORTHO05D005131 8.7e-09 65.1 66 56.1
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.9e-08 63.9 41 80.5
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 3.3e-08 63.2 106 41.5
Nitab4.5_0008813g0020 Nicotiana tabacum HOM05D033885 ORTHO05D005131 5.6e-08 62.4 50 68.0
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 7.3e-08 62.0 38 78.9
SEGI_14910 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 7.3e-08 62.0 200 32.5
Gohir.D07G041825 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.6e-07 60.8 62 48.4
Gorai.001G044400 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.8e-07 60.1 43 62.8
Nitab4.5_0004533g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 2.8e-07 60.1 40 75.0
Gohir.D11G280866 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.2e-07 58.9 41 73.2
vmacro21330 Vaccinium macrocarpon HOM05D000963 ORTHO05D014445 6.2e-07 58.9 41 78.0
Gohir.A12G129550 Gossypium hirsutum HOM05D000963 ORTHO05D005131 8.1e-07 58.5 37 73.0
BcaB04g17971 Brassica carinata HOM05D009885 ORTHO05D015988 1.4e-06 57.8 45 64.4
CsaV3_UNG207940 Cucumis sativus L. HOM05D019464 ORTHO05D015988 1.4e-06 57.8 99 38.4
Gorai.007G303200 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.4e-06 57.0 41 70.7
Medtr4g076920 Medicago truncatula HOM05D008922 ORTHO05D010978 2.4e-06 57.0 50 62.0
Migut.D01497 Erythranthe guttata HOM05D000963 ORTHO05D005131 3.1e-06 56.6 30 93.3
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 6.9e-06 55.5 48 54.2


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