Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p24020 Brassica napus HOM05D006908 ORTHO05D008662 8.1e-117 423.7 206 100.0
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 2.3e-79 299.3 215 73.5
C06p54330 Brassica napus HOM05D002960 ORTHO05D003632 3.1e-68 262.3 180 75.6
BcaC08g47592 Brassica carinata HOM05D002960 ORTHO05D003632 9.1e-68 260.8 178 75.8
BolC6t40444H Brassica oleracea HOM05D002960 ORTHO05D003632 9.1e-68 260.8 178 75.8
BraA07t32051Z Brassica rapa HOM05D006908 ORTHO05D008662 6.5e-66 254.6 229 62.9
BcaC08g47561 Brassica carinata HOM05D006908 ORTHO05D008662 2.0e-62 243.0 177 74.0
AT1G79915 Arabidopsis thaliana HOM05D006908 ORTHO05D008662 6.9e-60 234.6 182 65.4
A07p45490 Brassica napus HOM05D006908 ORTHO05D008662 2.0e-59 233.0 198 64.6
Thhalv10018901m.g Eutrema salsugineum HOM05D006908 ORTHO05D008662 3.4e-59 232.3 179 68.7
Carub.0002s2758 Capsella rubella HOM05D006908 ORTHO05D008662 4.7e-56 221.9 182 62.6
BolC9t55322H Brassica oleracea HOM05D006908 ORTHO05D008662 6.7e-55 218.0 101 100.0
CARHR074570 Cardamine hirsuta HOM05D006908 ORTHO05D008662 8.8e-55 217.6 183 62.8
Sp5g35850 Schrenkiella parvula HOM05D006908 ORTHO05D008662 6.3e-53 211.5 178 60.7
Aa31LG4G230 Aethionema arabicum HOM05D006908 ORTHO05D008662 1.0e-50 204.1 181 58.0
THA.LOC104812520 Tarenaya hassleriana HOM05D006908 ORTHO05D008662 2.2e-42 176.4 180 48.9
CiPaw.01G238600 Carya illinoinensis HOM05D006908 ORTHO05D008662 7.2e-41 171.4 184 52.7
Cpa.g.sc0.185 Carica papaya HOM05D006908 ORTHO05D008662 1.2e-40 170.6 182 51.6
QL05p023344 Quercus lobata HOM05D006908 ORTHO05D008662 4.7e-40 168.7 187 49.7
COL.COLO4_30388 Corchorus olitorius HOM05D006908 ORTHO05D008662 2.6e-38 162.9 182 48.4
Eucgr.J02986 Eucalyptus grandis HOM05D006908 ORTHO05D008662 4.4e-38 162.2 191 47.6
Gohir.D09G082700 Gossypium hirsutum HOM05D006908 ORTHO05D008662 5.7e-38 161.8 181 49.7
Gorai.006G098400 Gossypium raimondii HOM05D006908 ORTHO05D008662 5.7e-38 161.8 181 49.7
CSS0010187 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 7.5e-38 161.4 185 48.1
Lalb_Chr22g0351301 Lupinus albus HOM05D006908 ORTHO05D008662 7.5e-38 161.4 184 47.3
FAN09G3067 Fragaria x ananassa HOM05D006908 ORTHO05D008662 9.8e-38 161.0 182 48.4
vmacro18903 Vaccinium macrocarpon HOM05D006908 ORTHO05D008662 1.3e-37 160.6 181 47.0
FAN05G1986 Fragaria x ananassa HOM05D006908 ORTHO05D008662 1.7e-37 160.2 182 48.4
CANSAT56G3342 Cannabis sativa HOM05D006908 ORTHO05D008662 2.2e-37 159.8 183 47.0
FvH4_6g31280 Fragaria vesca HOM05D006908 ORTHO05D008662 2.2e-37 159.8 182 48.4
Dinv38042 Davidia involucrata HOM05D006908 ORTHO05D008662 2.8e-37 159.5 180 47.2
Actinidia01807 Actinidia chinensis HOM05D006908 ORTHO05D008662 4.8e-37 158.7 180 46.1
DCAR_023055 Daucus carota HOM05D006908 ORTHO05D008662 8.3e-37 157.9 182 48.4
MD17G1194300 Malus domestica HOM05D006908 ORTHO05D008662 8.3e-37 157.9 185 47.0
Sabra01G0145800 Salix brachista HOM05D006908 ORTHO05D008662 8.3e-37 157.9 182 47.8
Prupe.3G070300 Prunus persica HOM05D006908 ORTHO05D008662 1.1e-36 157.5 225 43.1
GSVIVG01017098001 Vitis vinifera HOM05D006908 ORTHO05D008662 1.1e-36 157.5 180 47.8
MSTRG.11073 Avicennia marina HOM05D006908 ORTHO05D008662 1.4e-36 157.1 183 47.5
Rhsim08G0222000 Rhododendron simsii HOM05D006908 ORTHO05D008662 1.8e-36 156.8 185 45.4
Atru.chr1.3281 Acer truncatum HOM05D006908 ORTHO05D008662 2.4e-36 156.4 186 46.8
Lj5C59T9 Lonicera japonica HOM05D006908 ORTHO05D008662 2.4e-36 156.4 177 47.5
Thecc.06G089400 Theobroma cacao HOM05D006908 ORTHO05D008662 3.1e-36 156.0 185 47.0
Haze_16403 Corylus avellana HOM05D006908 ORTHO05D008662 4.1e-36 155.6 186 45.7
Lj3g0017668 Lotus japonicus HOM05D006908 ORTHO05D008662 5.4e-36 155.2 184 45.7
Manes.11G045900 Manihot esculenta HOM05D006908 ORTHO05D008662 7.0e-36 154.8 182 46.7
CAN.G438.72 Capsicum annuum HOM05D006908 ORTHO05D008662 9.1e-36 154.5 183 47.0
Duzib160G0703 Durio zibethinus HOM05D006908 ORTHO05D008662 9.1e-36 154.5 181 47.5
PGSC0003DMG400005687 Solanum tuberosum HOM05D006908 ORTHO05D008662 9.1e-36 154.5 184 45.7
Glyma.15G014900 Glycine max HOM05D006908 ORTHO05D008662 1.2e-35 154.1 181 47.0
Hund06614 Selenicereus undatus HOM05D006908 ORTHO05D008662 1.2e-35 154.1 178 45.5
Hma1.2p1_0323F.1_g125120 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 1.6e-35 153.7 183 44.8
Peaxi162Scf00015g00453 Petunia axillaris HOM05D006908 ORTHO05D008662 1.6e-35 153.7 185 44.9
PGR102G2040 Punica granatum HOM05D006908 ORTHO05D008662 2.0e-35 153.3 181 45.3
TWI75G1463 Tripterygium wilfordii HOM05D006908 ORTHO05D008662 2.0e-35 153.3 181 47.0
VMungo1080G1808 Vigna mungo HOM05D006908 ORTHO05D008662 2.0e-35 153.3 180 46.7
CSS0029579 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 2.7e-35 152.9 183 47.0
Psat5g298720 Pisum sativum HOM05D006908 ORTHO05D008662 3.5e-35 152.5 180 45.6
Ciclev10025928m.g Citrus clementina HOM05D006908 ORTHO05D008662 4.5e-35 152.1 185 49.7
Cc04_g03340 Coffea canephora HOM05D006908 ORTHO05D008662 4.5e-35 152.1 181 47.0
RcHm_v2.0_Chr2g0138011 Rosa chinensis HOM05D006908 ORTHO05D008662 5.9e-35 151.8 184 46.7
Solyc03g120130.4 Solanum lycopersicum HOM05D006908 ORTHO05D008662 5.9e-35 151.8 184 44.0
PSO782G4818 Papaver somniferum HOM05D006908 ORTHO05D008662 7.7e-35 151.4 215 41.9
AUR62042927 Chenopodium quinoa HOM05D006908 ORTHO05D008662 1.3e-34 150.6 208 41.3
Oeu063957.2 Olea europaea HOM05D006908 ORTHO05D008662 1.3e-34 150.6 178 45.5
Phvul.005G170700 Phaseolus vulgaris HOM05D006908 ORTHO05D008662 1.3e-34 150.6 191 43.5
Sopen03g039000 Solanum pennellii HOM05D006908 ORTHO05D008662 1.3e-34 150.6 183 44.8
Ca_01120_v3 Cicer arietinum L. HOM05D006908 ORTHO05D008662 1.7e-34 150.2 180 43.9
Migut.I00872 Erythranthe guttata HOM05D006908 ORTHO05D008662 1.7e-34 150.2 188 45.2
Nn8g39204 Nelumbo nucifera HOM05D006908 ORTHO05D008662 1.7e-34 150.2 191 47.1
Sc10g0007370 Simmondsia chinensis HOM05D006908 ORTHO05D008662 1.7e-34 150.2 186 42.5
Medtr2g102040 Medicago truncatula HOM05D006908 ORTHO05D008662 6.5e-34 148.3 181 44.8
HanXRQChr02g0032801 Helianthus annuus HOM05D006908 ORTHO05D008662 1.1e-33 147.5 183 45.9
Ah.01g005440 Amaranthus hybridus HOM05D006908 ORTHO05D008662 1.5e-33 147.1 178 44.9
arahy.Tifrunner.gnm1.ann1.0IDI1A Arachis hypogaea HOM05D006908 ORTHO05D008662 1.5e-33 147.1 189 44.4
arahy.Tifrunner.gnm1.ann1.UK934I Arachis hypogaea HOM05D006908 ORTHO05D008662 1.5e-33 147.1 189 44.4
SalBow2G2262 Salvia bowleyana HOM05D006908 ORTHO05D008662 1.5e-33 147.1 180 44.4
TAR626G0624 Trochodendron aralioides HOM05D006908 ORTHO05D008662 1.5e-33 147.1 192 44.8
unitig_52.g17450 Utricularia gibba HOM05D006908 ORTHO05D008662 1.5e-33 147.1 171 45.0
TPR.G37174 Trifolium pratense HOM05D006908 ORTHO05D008662 1.9e-33 146.7 183 43.2
MELO3C012958.2 Cucumis melo HOM05D006908 ORTHO05D008662 2.5e-33 146.4 185 43.2
EL10Ac9g22006 Beta vulgaris HOM05D006908 ORTHO05D008662 4.2e-33 145.6 177 44.1
CsaV3_3G025130 Cucumis sativus L. HOM05D006908 ORTHO05D008662 5.5e-33 145.2 185 43.2
ClCG07G013040 Citrullus lanatus HOM05D006908 ORTHO05D008662 7.2e-33 144.8 185 44.3
PSO063G2605 Papaver somniferum HOM05D006908 ORTHO05D008662 1.6e-32 143.7 221 40.7
CDE02G0011 Ceratophyllum demersum HOM05D006908 ORTHO05D008662 6.1e-32 141.7 182 39.6
Nitab4.5_0002308g0060 Nicotiana tabacum HOM05D006908 ORTHO05D008662 3.0e-31 139.4 183 44.3
Sed0021689 Sechium edule HOM05D006908 ORTHO05D008662 8.9e-31 137.9 183 41.0
AUR62016450 Chenopodium quinoa HOM05D006908 ORTHO05D008662 1.2e-30 137.5 202 39.1
AL2G41640 Arabidopsis lyrata HOM05D006908 ORTHO05D008662 1.7e-29 133.7 147 49.7
ATR0602G186 Amborella trichopoda HOM05D006908 ORTHO05D008662 6.3e-29 131.7 215 37.7
ECA247G1365 Erigeron canadensis HOM05D006908 ORTHO05D008662 8.3e-29 131.3 104 61.5
Os06g0639300 Oryza sativa ssp. japonica HOM05D006908 ORTHO05D008662 8.3e-29 131.3 185 40.0
HPP92_003725 Vanilla planifolia HOM05D006908 ORTHO05D008662 1.8e-28 130.2 184 40.8
Zm00001eb275430 Zea mays HOM05D006908 ORTHO05D008662 4.1e-28 129.0 188 40.4
Aqoxy7G01689 Aquilegia oxysepala HOM05D006908 ORTHO05D008662 1.6e-27 127.1 164 43.3
Hma1.2p1_0323F.1_g125130 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 2.7e-27 126.3 108 57.4
SEGI_13943 Sequoiadendron giganteum HOM05D006908 ORTHO05D008662 5.9e-27 125.2 198 36.4
Gohir.A09G082800 Gossypium hirsutum HOM05D006908 ORTHO05D008662 1.3e-26 124.0 187 40.6
MBI15_g13424_MAGBIO Magnolia biondii HOM05D006908 ORTHO05D008662 6.6e-26 121.7 103 59.2
SHI10939 Sapria himalayana HOM05D006908 ORTHO05D008662 6.6e-26 121.7 185 38.9
Nitab4.5_0000671g0150 Nicotiana tabacum HOM05D006908 ORTHO05D008662 1.5e-25 120.6 161 43.5
Mapoly0072s0004 Marchantia polymorpha HOM05D006908 ORTHO05D008662 2.5e-25 119.8 188 38.3
Potri.001G181200 Populus trichocarpa HOM05D006908 ORTHO05D008662 3.0e-23 112.8 136 46.3
Lsat_1_v5_gn_1_35121 Lactuca sativa HOM05D006908 ORTHO05D008662 8.9e-23 111.3 113 54.0
AagrBONN_evm.TU.Sc2ySwM_344.5185 Anthoceros agrestis HOM05D006908 ORTHO05D008662 2.9e-21 106.3 186 34.9
FAN02G3381 Fragaria x ananassa HOM05D006908 ORTHO05D008662 3.2e-20 102.8 151 39.7
CBR_g20274 Chara braunii HOM05D006908 ORTHO05D008662 2.0e-19 100.1 213 31.0
Pp3c16_8290 Physcomitrium patens HOM05D006908 ORTHO05D008662 1.3e-18 97.4 194 33.5
AUR62033073 Chenopodium quinoa HOM05D006908 ORTHO05D008662 1.7e-18 97.1 154 38.3
Cpa.g.sc41.12 Carica papaya HOM05D006908 ORTHO05D008662 4.3e-17 92.4 79 60.8
Cfa002075 Carpinus fangiana HOM05D006908 ORTHO05D008662 7.0e-12 75.1 111 40.5


User provided reference genes

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