Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p23930 Brassica napus HOM05D000219 ORTHO05D017689 1.3e-51 206.1 103 100.0
A07p24800 Brassica napus HOM05D000219 ORTHO05D017689 3.4e-47 191.4 104 94.2
BraA03t15335Z Brassica rapa HOM05D000219 ORTHO05D017689 3.4e-47 191.4 104 94.2
A02p19800 Brassica napus HOM05D000219 ORTHO05D017689 1.7e-46 189.1 104 93.3
C07p22140 Brassica napus HOM05D000219 ORTHO05D017689 1.7e-30 136.0 72 91.7
BolC7t42785H Brassica oleracea HOM05D000219 ORTHO05D017689 1.7e-30 136.0 72 91.7
C03p59850 Brassica napus HOM05D000219 ORTHO05D017689 5.4e-29 131.0 71 90.1
A06p33720 Brassica napus HOM05D000219 ORTHO05D097765 3.0e-19 98.6 74 71.6
C03p55660 Brassica napus HOM05D000219 ORTHO05D017689 1.1e-16 90.1 42 97.6
BolC3t17843H Brassica oleracea HOM05D000219 ORTHO05D017689 1.1e-16 90.1 42 97.6
AT2G31580 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 5.8e-15 84.3 73 64.4
A04p08950 Brassica napus HOM05D000219 ORTHO05D101342 1.3e-14 83.2 41 92.7
A03p17780 Brassica napus HOM05D000219 ORTHO05D004649 1.7e-14 82.8 73 63.0
Carub.0004s1289 Capsella rubella HOM05D000219 ORTHO05D004649 1.7e-14 82.8 73 64.4
CARHR008820 Cardamine hirsuta HOM05D000219 ORTHO05D004649 2.2e-14 82.4 73 64.4
Sp4g14010 Schrenkiella parvula HOM05D000219 ORTHO05D004649 2.2e-14 82.4 73 63.0
Aa31LG5G4650 Aethionema arabicum HOM05D000219 ORTHO05D004649 2.9e-14 82.0 73 63.0
A05p13880 Brassica napus HOM05D000219 ORTHO05D004649 3.8e-14 81.6 73 63.0
BraA05t20324Z Brassica rapa HOM05D000219 ORTHO05D004649 3.8e-14 81.6 73 63.0
AL4G26840 Arabidopsis lyrata HOM05D000219 ORTHO05D004649 1.1e-13 80.1 73 61.6
BcaB02g10403 Brassica carinata HOM05D000219 ORTHO05D004649 1.4e-13 79.7 73 61.6
Carub.0004s1193 Capsella rubella HOM05D000219 ORTHO05D004649 1.9e-13 79.3 73 60.3
C04p18270 Brassica napus HOM05D000219 ORTHO05D004649 2.4e-13 79.0 73 60.3
BolC4t23384H Brassica oleracea HOM05D000219 ORTHO05D004649 2.4e-13 79.0 73 60.3
Sed0023684 Sechium edule HOM05D000219 ORTHO05D004649 2.4e-13 79.0 73 54.8
THA.LOC104800903 Tarenaya hassleriana HOM05D000219 ORTHO05D004649 2.4e-13 79.0 75 58.7
C03p20860 Brassica napus HOM05D000219 ORTHO05D004649 3.2e-13 78.6 73 58.9
BolC3t14438H Brassica oleracea HOM05D000219 ORTHO05D004649 3.2e-13 78.6 73 58.9
BcaC02g11270 Brassica carinata HOM05D000219 ORTHO05D004649 7.1e-13 77.4 73 58.9
Carub.0004s1368 Capsella rubella HOM05D000219 ORTHO05D004649 7.1e-13 77.4 73 58.9
CsaV3_6G042230 Cucumis sativus L. HOM05D000219 ORTHO05D004649 9.3e-13 77.0 73 54.8
Thhalv10016524m.g Eutrema salsugineum HOM05D000219 ORTHO05D004649 9.3e-13 77.0 73 58.9
AT2G32320 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 1.2e-12 76.6 73 60.3
BraA03t11042Z Brassica rapa HOM05D000219 ORTHO05D004649 1.2e-12 76.6 73 58.9
Ciclev10027573m.g Citrus clementina HOM05D000219 ORTHO05D004649 2.7e-12 75.5 73 54.8
Potri.002G233300 Populus trichocarpa HOM05D000219 ORTHO05D004649 1.3e-11 73.2 73 50.7
Sabra02G0178000 Salix brachista HOM05D000219 ORTHO05D004649 2.3e-11 72.4 70 51.4
QL06p031679 Quercus lobata HOM05D000219 ORTHO05D004649 5.1e-11 71.2 73 50.7
Oeu035604.1 Olea europaea HOM05D000219 ORTHO05D004649 6.6e-11 70.9 73 50.7
Actinidia39311 Actinidia chinensis HOM05D000219 ORTHO05D004649 8.7e-11 70.5 73 52.1
Atru.chr10.1005 Acer truncatum HOM05D000219 ORTHO05D004649 1.1e-10 70.1 73 49.3
CiPaw.15G021800 Carya illinoinensis HOM05D000219 ORTHO05D004649 1.1e-10 70.1 73 50.7
Manes.11G020000 Manihot esculenta HOM05D000219 ORTHO05D004649 1.5e-10 69.7 75 46.7
Dinv19467 Davidia involucrata HOM05D000219 ORTHO05D004649 1.9e-10 69.3 73 50.7
GSVIVG01022253001 Vitis vinifera HOM05D000219 ORTHO05D004649 1.9e-10 69.3 73 50.7
Haze_08455 Corylus avellana HOM05D000219 ORTHO05D004649 2.5e-10 68.9 73 50.7
Cfa002771 Carpinus fangiana HOM05D000219 ORTHO05D004649 4.3e-10 68.2 73 50.7
Eucgr.H04885 Eucalyptus grandis HOM05D000219 ORTHO05D004649 4.3e-10 68.2 73 49.3
Lj8A365T11 Lonicera japonica HOM05D000219 ORTHO05D004649 4.3e-10 68.2 75 45.3
Prupe.1G573900 Prunus persica HOM05D000219 ORTHO05D004649 4.3e-10 68.2 75 46.7
SGA_v2.0_scaffold2G01286 Striga asiatica HOM05D000219 ORTHO05D004649 4.3e-10 68.2 73 47.9
Duzib235G0760 Durio zibethinus HOM05D000219 ORTHO05D004649 5.6e-10 67.8 73 49.3
Migut.B00934 Erythranthe guttata HOM05D000219 ORTHO05D004649 5.6e-10 67.8 73 50.7
Gorai.009G178600 Gossypium raimondii HOM05D000219 ORTHO05D004649 5.6e-10 67.8 73 50.7
Oeu027201.4 Olea europaea HOM05D000219 ORTHO05D004649 5.6e-10 67.8 73 46.6
CSS0031787 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D004649 7.3e-10 67.4 73 50.7
COL.COLO4_17688 Corchorus olitorius HOM05D000219 ORTHO05D004649 7.3e-10 67.4 73 47.9
Gohir.A05G170300 Gossypium hirsutum HOM05D000219 ORTHO05D004649 7.3e-10 67.4 73 49.3
Gohir.D05G173400 Gossypium hirsutum HOM05D000219 ORTHO05D004649 7.3e-10 67.4 73 49.3
FAN20G1304 Fragaria x ananassa HOM05D000219 ORTHO05D004649 9.6e-10 67.0 73 46.6
CANSAT01G1436 Cannabis sativa HOM05D000219 ORTHO05D004649 1.3e-09 66.6 82 50.0
FvH4_2g15830 Fragaria vesca HOM05D000219 ORTHO05D004649 1.3e-09 66.6 75 45.3
FAN24G0946 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.3e-09 66.6 75 45.3
Thecc.06G220500 Theobroma cacao HOM05D000219 ORTHO05D004649 1.3e-09 66.6 73 49.3
CANSAT64G2196 Cannabis sativa HOM05D000219 ORTHO05D004649 1.6e-09 66.2 73 52.1
TAR628G0592 Trochodendron aralioides HOM05D000219 ORTHO05D004649 1.6e-09 66.2 73 47.9
MSTRG.2524 Avicennia marina HOM05D000219 ORTHO05D004649 2.1e-09 65.9 75 46.7
Hma1.2p1_0975F.1_g243180 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 2.1e-09 65.9 75 46.7
MD05G1030700 Malus domestica HOM05D000219 ORTHO05D004649 2.1e-09 65.9 75 45.3
TWI79G1233 Tripterygium wilfordii HOM05D000219 ORTHO05D004649 2.1e-09 65.9 73 46.6
TAR625G1522 Trochodendron aralioides HOM05D000219 ORTHO05D004649 2.1e-09 65.9 73 49.3
FvH4_1g22971 Fragaria vesca HOM05D000219 ORTHO05D004649 4.8e-09 64.7 75 44.0
FAN15G1293 Fragaria x ananassa HOM05D000219 ORTHO05D004649 4.8e-09 64.7 75 45.3
FAN23G1549 Fragaria x ananassa HOM05D000219 ORTHO05D004649 4.8e-09 64.7 75 44.0
FAN26G0146 Fragaria x ananassa HOM05D000219 ORTHO05D004649 4.8e-09 64.7 75 44.0
Cc07_g16490 Coffea canephora HOM05D000219 ORTHO05D004649 6.2e-09 64.3 73 45.2
Haze_25064 Corylus avellana HOM05D000219 ORTHO05D004649 6.2e-09 64.3 73 47.9
FAN27G2048 Fragaria x ananassa HOM05D000219 ORTHO05D004649 6.2e-09 64.3 75 44.0
Hma1.2p1_0252F.1_g102800 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 6.2e-09 64.3 73 46.6
unitig_899.g14613 Utricularia gibba HOM05D000219 ORTHO05D004649 6.2e-09 64.3 73 46.6
Ca_09426_v3 Cicer arietinum L. HOM05D000219 ORTHO05D004649 8.1e-09 63.9 71 40.8
GSVIVG01006301001 Vitis vinifera HOM05D000026 ORTHO05D000127 8.1e-09 63.9 75 45.3
arahy.Tifrunner.gnm1.ann1.M2QW19 Arachis hypogaea HOM05D000219 ORTHO05D004649 1.1e-08 63.5 71 43.7
arahy.Tifrunner.gnm1.ann1.V7J6Z4 Arachis hypogaea HOM05D000219 ORTHO05D004649 1.1e-08 63.5 71 43.7
CAN.G1235.19 Capsicum annuum HOM05D000219 ORTHO05D004649 1.1e-08 63.5 73 45.2
HanXRQChr10g0311141 Helianthus annuus HOM05D000219 ORTHO05D004649 1.4e-08 63.2 75 42.7
Peaxi162Scf00106g01118 Petunia axillaris HOM05D000219 ORTHO05D004649 1.4e-08 63.2 75 45.3
Rhsim10G0148200 Rhododendron simsii HOM05D000219 ORTHO05D004649 1.4e-08 63.2 73 47.9
Hund21266 Selenicereus undatus HOM05D000219 ORTHO05D004649 1.4e-08 63.2 73 45.2
ECA234G1541 Erigeron canadensis HOM05D000219 ORTHO05D004649 1.8e-08 62.8 75 41.3
SalBow6G5746 Salvia bowleyana HOM05D000219 ORTHO05D004649 1.8e-08 62.8 73 43.8
Atru.chr10.1697 Acer truncatum HOM05D000219 ORTHO05D004649 2.4e-08 62.4 73 47.9
COL.COLO4_16836 Corchorus olitorius HOM05D000219 ORTHO05D004649 3.1e-08 62.0 93 43.0
Glyma.16G091600 Glycine max HOM05D000219 ORTHO05D004649 3.1e-08 62.0 71 40.8
Glyma.16G117633 Glycine max HOM05D000219 ORTHO05D004649 3.1e-08 62.0 71 40.8
Lj5g0005884 Lotus japonicus HOM05D000219 ORTHO05D004649 3.1e-08 62.0 71 43.7
Lalb_Chr11g0075091 Lupinus albus HOM05D000219 ORTHO05D004649 3.1e-08 62.0 71 40.8
Lj6g0002222 Lotus japonicus HOM05D000219 ORTHO05D004649 4.0e-08 61.6 71 40.8
Psat7g054840 Pisum sativum HOM05D000219 ORTHO05D004649 5.3e-08 61.2 71 40.8
TPR.G6992 Trifolium pratense HOM05D000219 ORTHO05D004649 9.0e-08 60.5 71 40.8
Glyma.10G001600 Glycine max HOM05D000219 ORTHO05D004649 1.2e-07 60.1 71 39.4
Medtr7g115250 Medicago truncatula HOM05D000219 ORTHO05D004649 1.2e-07 60.1 71 39.4
Phvul.010G125700 Phaseolus vulgaris HOM05D000219 ORTHO05D004649 1.2e-07 60.1 69 42.0
VMungo0720G2488 Vigna mungo HOM05D000219 ORTHO05D004649 1.2e-07 60.1 69 42.0
AUR62013249 Chenopodium quinoa HOM05D000219 ORTHO05D004649 2.0e-07 59.3 73 42.5
Solyc04g051600.4 Solanum lycopersicum HOM05D000219 ORTHO05D004649 2.0e-07 59.3 79 43.0
Psat0s1144g0040 Pisum sativum HOM05D000219 ORTHO05D004649 2.6e-07 58.9 71 38.0
ClCG01G015950 Citrullus lanatus HOM05D000219 ORTHO05D004649 3.4e-07 58.5 73 45.2
DCAR_027131 Daucus carota HOM05D000219 ORTHO05D004649 3.4e-07 58.5 73 45.2
RcHm_v2.0_Chr6g0279211 Rosa chinensis HOM05D000219 ORTHO05D004649 3.4e-07 58.5 75 41.3
Sopen04g022970 Solanum pennellii HOM05D000219 ORTHO05D004649 3.4e-07 58.5 73 43.8
AUR62016924 Chenopodium quinoa HOM05D000219 ORTHO05D004649 4.5e-07 58.2 73 42.5
MBI05_g03455_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 4.5e-07 58.2 73 45.2
SHI31709 Sapria himalayana HOM05D000219 ORTHO05D004649 4.5e-07 58.2 77 40.3
Sopen04g022950 Solanum pennellii HOM05D000219 ORTHO05D000001 5.8e-07 57.8 70 45.7
AUR62010269 Chenopodium quinoa HOM05D000219 ORTHO05D004649 9.9e-07 57.0 73 41.1
HPP92_021547 Vanilla planifolia HOM05D000219 ORTHO05D004649 1.3e-06 56.6 73 41.1
Nn1g05995 Nelumbo nucifera HOM05D000219 ORTHO05D004649 1.7e-06 56.2 75 42.7
Atru.chr10.1102 Acer truncatum HOM05D000219 ORTHO05D004649 2.9e-06 55.5 60 48.3
Aqoxy3G01228 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 3.8e-06 55.1 73 43.8
MELO3C007464.2 Cucumis melo HOM05D000219 ORTHO05D004649 3.8e-06 55.1 73 43.8
Aqoxy2G01146 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 8.4e-06 53.9 73 42.5
MBI04_g33333_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 8.4e-06 53.9 73 42.5
TAR628G0698 Trochodendron aralioides HOM05D000219 ORTHO05D004649 8.4e-06 53.9 71 40.8


User provided reference genes

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