Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p23550 Brassica napus HOM05D004224 ORTHO05D006437 2.2e-64 248.8 125 100.0
BolC9t55274H Brassica oleracea HOM05D004224 ORTHO05D006437 2.2e-64 248.8 125 100.0
BolC5t32389H Brassica oleracea HOM05D004224 ORTHO05D006437 9.1e-55 216.9 123 90.2
BcaC04g22092 Brassica carinata HOM05D004224 ORTHO05D006437 3.5e-38 161.8 125 73.6
BcaB04g21275 Brassica carinata HOM05D004224 ORTHO05D006437 8.6e-29 130.6 144 56.2
BolC1t05538H Brassica oleracea HOM05D004224 ORTHO05D006437 2.5e-28 129.0 144 55.6
AT3G07670 Arabidopsis thaliana HOM05D004224 ORTHO05D006437 2.1e-27 125.9 116 62.9
AL3G19030 Arabidopsis lyrata HOM05D004224 ORTHO05D006437 3.6e-27 125.2 116 62.9
Carub.0003s0725 Capsella rubella HOM05D004224 ORTHO05D006437 3.6e-27 125.2 116 62.9
Thhalv10020552m.g Eutrema salsugineum HOM05D004224 ORTHO05D006437 4.7e-27 124.8 142 54.9
CARHR082380 Cardamine hirsuta HOM05D004224 ORTHO05D006437 1.8e-26 122.9 116 62.1
Aa31LG5G18250 Aethionema arabicum HOM05D004224 ORTHO05D006437 2.3e-26 122.5 116 61.2
Sp3g06610 Schrenkiella parvula HOM05D004224 ORTHO05D006437 3.0e-26 122.1 142 54.2
THA.LOC104802631 Tarenaya hassleriana HOM05D004224 ORTHO05D006437 1.5e-25 119.8 144 52.1
PGSC0003DMG400017407 Solanum tuberosum HOM05D004224 ORTHO05D006437 5.4e-23 111.3 142 47.9
ECA236G4771 Erigeron canadensis HOM05D004224 ORTHO05D006437 7.0e-23 110.9 142 50.7
Cpa.g.sc136.38 Carica papaya HOM05D004224 ORTHO05D006437 1.6e-22 109.8 142 49.3
Manes.13G060800 Manihot esculenta HOM05D004224 ORTHO05D006437 1.6e-22 109.8 149 49.0
Sopen07g023840 Solanum pennellii HOM05D004224 ORTHO05D006437 1.6e-22 109.8 143 48.3
Solyc07g045310.4 Solanum lycopersicum HOM05D004224 ORTHO05D006437 2.0e-22 109.4 142 46.5
Ciclev10014974m.g Citrus clementina HOM05D004224 ORTHO05D006437 2.7e-22 109.0 142 51.4
Lsat_1_v5_gn_7_97380 Lactuca sativa HOM05D004224 ORTHO05D006437 2.7e-22 109.0 149 47.7
CiPaw.03G282900 Carya illinoinensis HOM05D004224 ORTHO05D006437 3.5e-22 108.6 116 56.9
HanXRQChr11g0329421 Helianthus annuus HOM05D004224 ORTHO05D006437 3.5e-22 108.6 149 47.7
TWI75G0912 Tripterygium wilfordii HOM05D004224 ORTHO05D006437 3.5e-22 108.6 141 47.5
Lalb_Chr04g0259131 Lupinus albus HOM05D004224 ORTHO05D006437 4.6e-22 108.2 142 50.0
Potri.014G169300 Populus trichocarpa HOM05D004224 ORTHO05D006437 7.8e-22 107.5 138 50.7
CAN.G437.10 Capsicum annuum HOM05D004224 ORTHO05D006437 1.0e-21 107.1 142 47.2
CsaV3_7G002430 Cucumis sativus L. HOM05D004224 ORTHO05D006437 1.3e-21 106.7 142 49.3
Glyma.13G010500 Glycine max HOM05D004224 ORTHO05D006437 1.3e-21 106.7 149 48.3
Thecc.01G198200 Theobroma cacao HOM05D004224 ORTHO05D006437 1.3e-21 106.7 142 47.2
COL.COLO4_19641 Corchorus olitorius HOM05D004224 ORTHO05D006437 1.7e-21 106.3 138 47.8
MELO3C024188.2 Cucumis melo HOM05D004224 ORTHO05D006437 1.7e-21 106.3 142 49.3
Peaxi162Scf00612g00137 Petunia axillaris HOM05D004224 ORTHO05D006437 3.0e-21 105.5 142 47.9
CANSAT64G1501 Cannabis sativa HOM05D004224 ORTHO05D006437 3.9e-21 105.1 142 47.9
ClCG02G002970 Citrullus lanatus HOM05D004224 ORTHO05D006437 3.9e-21 105.1 142 47.9
Oeu040454.1 Olea europaea HOM05D004224 ORTHO05D006437 3.9e-21 105.1 149 47.0
Sabra14G0129100 Salix brachista HOM05D004224 ORTHO05D006437 3.9e-21 105.1 138 50.0
EL10Ac9g22662 Beta vulgaris HOM05D004224 ORTHO05D006437 5.0e-21 104.8 116 56.0
Gohir.D07G171000 Gossypium hirsutum HOM05D004224 ORTHO05D006437 5.0e-21 104.8 138 47.8
Gorai.001G190900 Gossypium raimondii HOM05D004224 ORTHO05D006437 5.0e-21 104.8 138 47.8
Lj6g0004652 Lotus japonicus HOM05D004224 ORTHO05D006437 5.0e-21 104.8 142 49.3
MD17G1118300 Malus domestica HOM05D004224 ORTHO05D006437 5.0e-21 104.8 142 47.2
Phvul.006G005700 Phaseolus vulgaris HOM05D004224 ORTHO05D006437 5.0e-21 104.8 142 47.2
QL04p067662 Quercus lobata HOM05D004224 ORTHO05D006437 6.6e-21 104.4 142 47.9
Rhsim06G0178000 Rhododendron simsii HOM05D004224 ORTHO05D006437 6.6e-21 104.4 142 49.3
RcHm_v2.0_Chr2g0155741 Rosa chinensis HOM05D004224 ORTHO05D006437 6.6e-21 104.4 142 46.5
Cfa014211 Carpinus fangiana HOM05D004224 ORTHO05D006437 8.6e-21 104.0 142 47.9
Haze_12602 Corylus avellana HOM05D004224 ORTHO05D006437 8.6e-21 104.0 142 47.9
Haze_12613 Corylus avellana HOM05D004224 ORTHO05D006437 8.6e-21 104.0 142 47.9
Migut.M00055 Erythranthe guttata HOM05D004224 ORTHO05D006437 8.6e-21 104.0 142 47.2
Sed0013057 Sechium edule HOM05D004224 ORTHO05D006437 8.6e-21 104.0 142 48.6
FvH4_6g40490 Fragaria vesca HOM05D004224 ORTHO05D006437 1.5e-20 103.2 142 47.2
FAN05G1563 Fragaria x ananassa HOM05D004224 ORTHO05D006437 1.5e-20 103.2 142 47.2
FAN10G1506 Fragaria x ananassa HOM05D004224 ORTHO05D006437 1.5e-20 103.2 142 47.2
FAN14G2615 Fragaria x ananassa HOM05D004224 ORTHO05D006437 1.5e-20 103.2 142 47.2
vmacro12069 Vaccinium macrocarpon HOM05D004224 ORTHO05D006437 1.5e-20 103.2 138 49.3
MSTRG.14913 Avicennia marina HOM05D004224 ORTHO05D006437 1.9e-20 102.8 116 54.3
MBI15_g41427_MAGBIO Magnolia biondii HOM05D004224 ORTHO05D006437 1.9e-20 102.8 116 55.2
Prupe.3G196100 Prunus persica HOM05D004224 ORTHO05D006437 1.9e-20 102.8 142 46.5
Actinidia09800 Actinidia chinensis HOM05D004224 ORTHO05D006437 2.5e-20 102.4 142 49.3
arahy.Tifrunner.gnm1.ann1.CZ6VEU Arachis hypogaea HOM05D004224 ORTHO05D006437 2.5e-20 102.4 142 47.2
arahy.Tifrunner.gnm1.ann1.ZYNV17 Arachis hypogaea HOM05D004224 ORTHO05D006437 2.5e-20 102.4 142 47.2
GSVIVG01030117001 Vitis vinifera HOM05D004224 ORTHO05D006437 2.5e-20 102.4 138 48.6
BcaB02g11239 Brassica carinata HOM05D004224 ORTHO05D006437 3.3e-20 102.1 81 72.8
PGR031G1258 Punica granatum HOM05D004224 ORTHO05D006437 3.3e-20 102.1 142 46.5
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 4.3e-20 101.7 116 54.3
AUR62014995 Chenopodium quinoa HOM05D004224 ORTHO05D006437 4.3e-20 101.7 139 48.2
Medtr3g082690 Medicago truncatula HOM05D004224 ORTHO05D006437 4.3e-20 101.7 144 47.2
PSO541G4615 Papaver somniferum HOM05D004224 ORTHO05D006437 4.3e-20 101.7 139 50.4
PSO675G8516 Papaver somniferum HOM05D004224 ORTHO05D006437 4.3e-20 101.7 139 50.4
CSS0035947 Camellia sinensis var. sinensis HOM05D004224 ORTHO05D006437 7.3e-20 100.9 142 47.2
Ca_16340_v3 Cicer arietinum L. HOM05D004224 ORTHO05D006437 7.3e-20 100.9 149 47.0
Hma1.2p1_0629F.1_g192230 Hydrangea macrophylla HOM05D004224 ORTHO05D006437 9.5e-20 100.5 142 48.6
Nn1g07539 Nelumbo nucifera HOM05D004224 ORTHO05D006437 9.5e-20 100.5 142 48.6
SGA_v2.0_scaffold73G24493 Striga asiatica HOM05D004224 ORTHO05D006437 9.5e-20 100.5 114 53.5
ATR0751G026 Amborella trichopoda HOM05D004224 ORTHO05D006437 1.2e-19 100.1 142 46.5
Eucgr.A01370 Eucalyptus grandis HOM05D004224 ORTHO05D006437 1.2e-19 100.1 114 54.4
Psat5g104720 Pisum sativum HOM05D004224 ORTHO05D006437 1.2e-19 100.1 149 45.6
DCAR_019670 Daucus carota HOM05D004224 ORTHO05D006437 1.6e-19 99.8 146 45.9
Lj1A799T35 Lonicera japonica HOM05D004224 ORTHO05D006437 2.1e-19 99.4 142 47.2
Os02g0725200 Oryza sativa ssp. japonica HOM05D004224 ORTHO05D006437 2.1e-19 99.4 149 45.6
Aqoxy7G02030 Aquilegia oxysepala HOM05D004224 ORTHO05D006437 2.8e-19 99.0 149 45.0
CDE05G3447 Ceratophyllum demersum HOM05D004224 ORTHO05D006437 2.8e-19 99.0 142 46.5
TAR629G0565 Trochodendron aralioides HOM05D004224 ORTHO05D006437 4.7e-19 98.2 142 47.9
HPP92_018978 Vanilla planifolia HOM05D004224 ORTHO05D006437 4.7e-19 98.2 117 52.1
Dinv21312 Davidia involucrata HOM05D004224 ORTHO05D006437 6.2e-19 97.8 116 53.4
MBI15_g45882_MAGBIO Magnolia biondii HOM05D004224 ORTHO05D006437 8.0e-19 97.4 116 51.7
Sc21g0000480 Simmondsia chinensis HOM05D004224 ORTHO05D006437 8.0e-19 97.4 142 47.2
BcaB02g11236 Brassica carinata HOM05D004224 ORTHO05D006437 1.4e-15 86.7 69 71.0
BraA01t04368Z Brassica rapa HOM05D004224 ORTHO05D006437 5.4e-15 84.7 136 45.6
Gorai.004G061300 Gossypium raimondii HOM05D004224 ORTHO05D006437 2.3e-13 79.3 116 43.1
BcaB04g18901 Brassica carinata HOM05D004224 ORTHO05D006437 1.9e-12 76.3 57 73.7
Gohir.A08G049300 Gossypium hirsutum HOM05D004224 ORTHO05D006437 1.9e-12 76.3 116 42.2
BolC6t38235H Brassica oleracea HOM05D000117 ORTHO05D000070 9.5e-12 73.9 63 65.1
BcaC03g16709 Brassica carinata HOM05D004224 ORTHO05D006437 1.2e-11 73.6 55 72.7
SEGI_13327 Sequoiadendron giganteum HOM05D004224 ORTHO05D006437 1.1e-10 70.5 114 39.5
A07p13570 Brassica napus HOM05D004011 ORTHO05D006437 1.2e-09 67.0 70 55.7
Nitab4.5_0004852g0010 Nicotiana tabacum HOM05D004224 ORTHO05D006437 2.0e-09 66.2 79 48.1
Nitab4.5_0005354g0080 Nicotiana tabacum HOM05D004224 ORTHO05D006437 5.8e-09 64.7 79 46.8
Pp3c4_19510 Physcomitrium patens HOM05D004224 ORTHO05D006437 5.8e-09 64.7 113 36.3
TPR.G16163 Trifolium pratense HOM05D004224 ORTHO05D006437 5.8e-09 64.7 77 49.4
AagrBONN_evm.TU.Sc2ySwM_228.1763 Anthoceros agrestis HOM05D004224 ORTHO05D006437 3.7e-08 62.0 88 38.6
SMO358G0584 Selaginella moellendorffii HOM05D004224 ORTHO05D006437 3.7e-08 62.0 92 41.3
FAN09G3658 Fragaria x ananassa HOM05D004224 ORTHO05D006437 4.9e-08 61.6 72 47.2
MD09G1129500 Malus domestica HOM05D004224 ORTHO05D006437 1.9e-07 59.7 74 44.6
AUR62035877 Chenopodium quinoa HOM05D004224 ORTHO05D006437 5.4e-07 58.2 77 44.2
BcaC05g27336 Brassica carinata HOM05D004224 ORTHO05D006437 6.0e-06 54.7 106 39.6


User provided reference genes

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