Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p23510 Brassica napus HOM05D002909 ORTHO05D042661 7.9e-45 183.3 89 100.0
BolC9t55272H Brassica oleracea HOM05D002909 ORTHO05D042661 7.9e-45 183.3 89 100.0
BcaC04g22094 Brassica carinata HOM05D002909 ORTHO05D000493 8.2e-34 146.7 83 90.4
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 3.8e-31 137.9 88 80.7
C09p23440 Brassica napus HOM05D002909 ORTHO05D000493 3.8e-31 137.9 88 80.7
BolC9t55266H Brassica oleracea HOM05D002909 ORTHO05D000493 3.8e-31 137.9 88 80.7
A09p18750 Brassica napus HOM05D002909 ORTHO05D000493 5.5e-30 134.0 89 79.8
BcaB07g31152 Brassica carinata HOM05D002909 ORTHO05D000493 3.3e-27 124.8 88 75.0
BcaNung03314 Brassica carinata HOM05D002909 ORTHO05D000493 5.0e-23 110.9 89 67.4
Sp2g05870 Schrenkiella parvula HOM05D002909 ORTHO05D000493 1.4e-17 92.8 90 62.2
SpUn0028_0070 Schrenkiella parvula HOM05D002909 ORTHO05D000493 1.4e-17 92.8 90 62.2
A09p18730 Brassica napus HOM05D002909 ORTHO05D000493 5.5e-14 80.9 89 53.9
AL6G12210 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.5e-11 72.8 82 47.6
AL6G12220 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 2.6e-11 72.0 87 52.9
AT5G02930 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 2.6e-11 72.0 67 50.7
AT5G02910 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 7.5e-11 70.5 74 52.7
BcaC06g32021 Brassica carinata HOM05D002909 ORTHO05D000493 1.7e-10 69.3 74 52.7
Sp6g39690 Schrenkiella parvula HOM05D002909 ORTHO05D000493 3.7e-10 68.2 72 54.2
A10p32850 Brassica napus HOM05D002909 ORTHO05D000493 1.1e-09 66.6 74 48.6
BraA10t45322Z Brassica rapa HOM05D002909 ORTHO05D000493 1.1e-09 66.6 74 48.6
BraA05t21998Z Brassica rapa HOM05D002909 ORTHO05D000493 1.4e-09 66.2 84 44.0
Thhalv10014018m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 1.4e-09 66.2 72 52.8
BcaC05g28665 Brassica carinata HOM05D002909 ORTHO05D000493 7.0e-09 63.9 84 42.9
BolC5t33510H Brassica oleracea HOM05D002909 ORTHO05D000493 7.0e-09 63.9 84 42.9
A05p31650 Brassica napus HOM05D002909 ORTHO05D000493 9.2e-09 63.5 84 42.9
AT5G02920 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 1.2e-08 63.2 71 46.5
BcaNung03627 Brassica carinata HOM05D002909 ORTHO05D000493 1.6e-08 62.8 85 43.5
CARHR210400 Cardamine hirsuta HOM05D002909 ORTHO05D000493 1.6e-08 62.8 64 54.7
BcaNung04729 Brassica carinata HOM05D002909 ORTHO05D000493 2.0e-08 62.4 74 45.9
Thhalv10013441m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 3.5e-08 61.6 67 47.8
Thhalv10027265m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 4.5e-08 61.2 90 43.3
AL6G12190 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 7.8e-08 60.5 74 48.6
C09p73750 Brassica napus HOM05D002909 ORTHO05D000493 7.8e-08 60.5 74 45.9
BolC9t60108H Brassica oleracea HOM05D002909 ORTHO05D000493 7.8e-08 60.5 74 45.9
BcaB01g05865 Brassica carinata HOM05D002909 ORTHO05D000493 1.0e-07 60.1 72 44.4
BcaB05g21858 Brassica carinata HOM05D002909 ORTHO05D000493 1.0e-07 60.1 72 44.4
Thhalv10027555m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 1.0e-07 60.1 85 40.0
A01p03150 Brassica napus HOM05D002909 ORTHO05D000493 1.3e-07 59.7 66 48.5
C01p03500 Brassica napus HOM05D002909 ORTHO05D000493 1.3e-07 59.7 66 47.0
BraA01t00300Z Brassica rapa HOM05D002909 ORTHO05D000493 1.3e-07 59.7 66 48.5
Carub.0006s0171 Capsella rubella HOM05D002909 ORTHO05D000493 1.3e-07 59.7 72 48.6
Thhalv10026908m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 1.3e-07 59.7 88 42.0
AT5G02700 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 1.7e-07 59.3 70 50.0
AL4G38580 Arabidopsis lyrata HOM05D000001 ORTHO05D000003 2.3e-07 58.9 69 47.8
CARHR210370 Cardamine hirsuta HOM05D002909 ORTHO05D000493 2.9e-07 58.5 74 47.3
Aa31LG1G22020 Aethionema arabicum HOM05D002909 ORTHO05D000493 3.9e-07 58.2 74 45.9
AT3G28410 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 3.9e-07 58.2 70 48.6
A03p00910 Brassica napus HOM05D002909 ORTHO05D000493 5.0e-07 57.8 86 39.5
A05p31620 Brassica napus HOM05D002909 ORTHO05D000493 5.0e-07 57.8 74 47.3
C05p47960 Brassica napus HOM05D002909 ORTHO05D000493 5.0e-07 57.8 71 46.5
BraA03t09473Z Brassica rapa HOM05D002909 ORTHO05D000493 5.0e-07 57.8 86 39.5
BraA05t21995Z Brassica rapa HOM05D002909 ORTHO05D000493 5.0e-07 57.8 74 47.3
BraA09t37496Z Brassica rapa HOM05D002909 ORTHO05D000493 6.6e-07 57.4 40 72.5
BcaB03g15699 Brassica carinata HOM05D002909 ORTHO05D000493 1.1e-06 56.6 76 44.7
BcaC05g28663 Brassica carinata HOM05D002909 ORTHO05D000493 1.5e-06 56.2 74 45.9
C05p47950 Brassica napus HOM05D002909 ORTHO05D000493 1.5e-06 56.2 74 45.9
BolC3t12677H Brassica oleracea HOM05D002909 ORTHO05D000493 1.5e-06 56.2 86 41.9
BolC5t33506H Brassica oleracea HOM05D002909 ORTHO05D000493 1.5e-06 56.2 74 45.9
BcaB01g05876 Brassica carinata HOM05D002909 ORTHO05D000493 2.5e-06 55.5 65 44.6
AL6G12200 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 3.3e-06 55.1 70 48.6
BcaNung00595 Brassica carinata HOM05D002909 ORTHO05D000493 3.3e-06 55.1 67 46.3
BcaNung03626 Brassica carinata HOM05D002909 ORTHO05D000493 3.3e-06 55.1 62 54.8
A03p00970 Brassica napus HOM05D002909 ORTHO05D000493 3.3e-06 55.1 88 39.8
BolC1t00339H Brassica oleracea HOM05D002909 ORTHO05D000493 3.3e-06 55.1 67 46.3
BraA03t09479Z Brassica rapa HOM05D002909 ORTHO05D000493 3.3e-06 55.1 88 39.8
Carub.0006s0158 Capsella rubella HOM05D002909 ORTHO05D000493 3.3e-06 55.1 70 50.0
CARHR117790 Cardamine hirsuta HOM05D002909 ORTHO05D000493 3.3e-06 55.1 71 43.7
AL4G15410 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 4.3e-06 54.7 92 40.2
CARHR210380 Cardamine hirsuta HOM05D002909 ORTHO05D000493 4.3e-06 54.7 84 44.0
C03p01170 Brassica napus HOM05D002909 ORTHO05D000493 5.6e-06 54.3 86 40.7
Thhalv10014041m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 5.6e-06 54.3 64 48.4
AT3G03360 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 7.3e-06 53.9 71 45.1
A07p29890 Brassica napus HOM05D002909 ORTHO05D000493 7.3e-06 53.9 75 38.7
Carub.0001s3549 Capsella rubella HOM05D002909 ORTHO05D000493 7.3e-06 53.9 87 39.1
BcaC09g49523 Brassica carinata HOM05D002909 ORTHO05D000493 9.5e-06 53.5 39 66.7


User provided reference genes

Program Settings