Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p22810 Brassica napus HOM05D067539 ORTHO05D040566 2.2e-75 285.8 174 100.0
BolC9t55199H Brassica oleracea HOM05D067539 ORTHO05D040566 2.2e-75 285.8 174 100.0
Aa31LG3G5060 Aethionema arabicum HOM05D000002 ORTHO05D000001 2.8e-17 92.8 82 47.6
Aa31LG1G6100 Aethionema arabicum HOM05D000002 ORTHO05D000001 5.8e-15 85.1 69 50.7
Rhsim08G0105700 Rhododendron simsii HOM05D000995 ORTHO05D000001 3.3e-10 69.3 85 43.5
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.3e-10 68.9 85 38.8
Hma1.2p1_1270F.1_g271670 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.8e-08 61.6 71 42.3
MD03G1056000 Malus domestica HOM05D000002 ORTHO05D000001 5.8e-07 58.5 62 46.8
COL.COLO4_07246 Corchorus olitorius HOM05D000002 ORTHO05D000001 7.5e-07 58.2 48 50.0
MD14G1109000 Malus domestica HOM05D000002 ORTHO05D000001 9.8e-07 57.8 78 37.2
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 9.8e-07 57.8 86 37.2
Atru.chr10.1233 Acer truncatum HOM05D000002 ORTHO05D000001 2.2e-06 56.6 84 29.8
Manes.10G062750 Manihot esculenta HOM05D000002 ORTHO05D000001 2.9e-06 56.2 70 41.4
CSS0007133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-06 55.8 79 43.0
HanXRQChr09g0254161 Helianthus annuus HOM05D000002 ORTHO05D000001 8.3e-06 54.7 72 41.7
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 8.3e-06 54.7 60 45.0
TPR.G11076 Trifolium pratense HOM05D000002 ORTHO05D000001 8.3e-06 54.7 72 36.1


User provided reference genes

Program Settings