Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p22580 Brassica napus HOM05D000747 ORTHO05D030893 2.9e-11 70.5 34 100.0
BolC9t55176H Brassica oleracea HOM05D000747 ORTHO05D030893 5.6e-07 56.2 27 100.0
Potri.002G110500 Populus trichocarpa HOM05D000747 ORTHO05D001683 7.3e-07 55.8 28 89.3
Sabra02G0087000 Salix brachista HOM05D000747 ORTHO05D001683 7.3e-07 55.8 28 89.3
A09p18120 Brassica napus HOM05D000747 ORTHO05D001683 1.2e-06 55.1 33 78.8
Hund26826 Selenicereus undatus HOM05D000747 ORTHO05D001683 1.6e-06 54.7 28 85.7
CAN.G193.8 Capsicum annuum HOM05D000747 ORTHO05D001683 2.1e-06 54.3 28 82.1
Nitab4.5_0000131g0010 Nicotiana tabacum HOM05D000747 ORTHO05D001683 2.1e-06 54.3 28 82.1
Nitab4.5_0009446g0010 Nicotiana tabacum HOM05D000747 ORTHO05D001683 2.1e-06 54.3 28 82.1
Peaxi162Scf01112g00136 Petunia axillaris HOM05D000747 ORTHO05D001683 2.1e-06 54.3 28 82.1
Solyc04g076620.4 Solanum lycopersicum HOM05D000747 ORTHO05D001683 2.1e-06 54.3 28 82.1
Sopen04g030340 Solanum pennellii HOM05D000747 ORTHO05D001683 2.1e-06 54.3 28 82.1
BcaB07g31166 Brassica carinata HOM05D000747 ORTHO05D001683 2.8e-06 53.9 27 92.6
BcaC04g22166 Brassica carinata HOM05D000747 ORTHO05D001683 2.8e-06 53.9 27 92.6
BcaC04g22167 Brassica carinata HOM05D000747 ORTHO05D001683 2.8e-06 53.9 27 92.6
BcaC04g22169 Brassica carinata HOM05D000747 ORTHO05D001683 2.8e-06 53.9 27 92.6
A09p18070 Brassica napus HOM05D000747 ORTHO05D001683 2.8e-06 53.9 27 92.6
A09p18110 Brassica napus HOM05D000747 ORTHO05D001683 2.8e-06 53.9 27 92.6
BolC9t55170H Brassica oleracea HOM05D000747 ORTHO05D001683 2.8e-06 53.9 27 92.6
BolC9t55174H Brassica oleracea HOM05D000747 ORTHO05D001683 2.8e-06 53.9 27 92.6
BraA09t37446Z Brassica rapa HOM05D000747 ORTHO05D001683 2.8e-06 53.9 27 92.6
Sc15g0003080 Simmondsia chinensis HOM05D000747 ORTHO05D001683 2.8e-06 53.9 28 85.7
HPP92_024551 Vanilla planifolia HOM05D000747 ORTHO05D001683 2.8e-06 53.9 27 92.6
Aa31LG4G9560 Aethionema arabicum HOM05D000747 ORTHO05D001683 3.6e-06 53.5 27 88.9
arahy.Tifrunner.gnm1.ann1.I0605Y Arachis hypogaea HOM05D000747 ORTHO05D001683 3.6e-06 53.5 27 88.9
CARHR259180 Cardamine hirsuta HOM05D000747 ORTHO05D001683 3.6e-06 53.5 27 88.9
Sp6g10940 Schrenkiella parvula HOM05D000747 ORTHO05D001683 3.6e-06 53.5 27 88.9
ClCG08G011550 Citrullus lanatus HOM05D000747 ORTHO05D001683 6.2e-06 52.8 27 88.9
MELO3C011072.2 Cucumis melo HOM05D000747 ORTHO05D001683 6.2e-06 52.8 27 88.9
CsaV3_2G030130 Cucumis sativus L. HOM05D000747 ORTHO05D001683 6.2e-06 52.8 27 88.9
Sed0006720 Sechium edule HOM05D000747 ORTHO05D001683 6.2e-06 52.8 27 88.9
Zm00001eb133420 Zea mays HOM05D000747 ORTHO05D001683 6.2e-06 52.8 27 88.9
Zm00001eb409870 Zea mays HOM05D000747 ORTHO05D001683 6.2e-06 52.8 27 88.9
Actinidia10269 Actinidia chinensis HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
CiPaw.08G057100 Carya illinoinensis HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Ciclev10000001m.g Citrus clementina HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
COL.COLO4_35278 Corchorus olitorius HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Haze_22488 Corylus avellana HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Dinv42593 Davidia involucrata HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Duzib116G0124 Durio zibethinus HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
FvH4_5g34290 Fragaria vesca HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
FAN04G1446 Fragaria x ananassa HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
FAN08G1002 Fragaria x ananassa HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
FAN18G0248 Fragaria x ananassa HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Glyma.02G216000 Glycine max HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Glyma.04G096900 Glycine max HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Glyma.14G183000 Glycine max HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Gohir.A05G264300 Gossypium hirsutum HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Gohir.A06G030900 Gossypium hirsutum HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Gohir.D05G266800 Gossypium hirsutum HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Gorai.009G278900 Gossypium raimondii HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Gorai.010G033100 Gossypium raimondii HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Lj1g0021401 Lotus japonicus HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
LjContig00408g0027979 Lotus japonicus HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Lalb_Chr08g0242601 Lupinus albus HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Lalb_Chr11g0064861 Lupinus albus HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
MD15G1388600 Malus domestica HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Manes.05G189200 Manihot esculenta HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Manes.18G057015 Manihot esculenta HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Medtr5g066710 Medicago truncatula HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Phvul.008G183200 Phaseolus vulgaris HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Phvul.009G034900 Phaseolus vulgaris HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Psat5g049800 Pisum sativum HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Prupe.1G535000 Prunus persica HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
QL09p018620 Quercus lobata HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
RcHm_v2.0_Chr7g0234861 Rosa chinensis HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
SGA_v2.0_scaffold74G24548 Striga asiatica HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
Thecc.08G073800 Theobroma cacao HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
TPR.G30874 Trifolium pratense HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
TWI12G0371 Tripterygium wilfordii HOM05D000747 ORTHO05D001683 8.1e-06 52.4 27 85.2
GSVIVG01009206001 Vitis vinifera HOM05D000747 ORTHO05D001683 8.1e-06 52.4 28 78.6


User provided reference genes

Program Settings