Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p22010 Brassica napus HOM05D013697 ORTHO05D015934 9.5e-77 290.0 141 100.0
BolC9t55105H Brassica oleracea HOM05D013697 ORTHO05D015934 9.5e-77 290.0 141 100.0
C09p22000 Brassica napus HOM05D013697 ORTHO05D015934 8.4e-73 276.9 147 93.9
BolC9t55104H Brassica oleracea HOM05D013697 ORTHO05D015934 8.4e-73 276.9 147 93.9
A09p17660 Brassica napus HOM05D013697 ORTHO05D015934 3.2e-72 275.0 147 93.2
BraA09t37395Z Brassica rapa HOM05D013697 ORTHO05D015934 4.6e-71 271.2 147 91.2
C09p21980 Brassica napus HOM05D013697 ORTHO05D015934 4.8e-28 128.3 112 61.6
A09p17640 Brassica napus HOM05D013697 ORTHO05D015934 7.2e-24 114.4 94 67.0
BolC9t54845H Brassica oleracea HOM05D024654 ORTHO05D028072 2.3e-14 82.8 111 49.5
A09p16090 Brassica napus HOM05D024654 ORTHO05D028072 2.0e-13 79.7 128 40.6
BraA09t37246Z Brassica rapa HOM05D024654 ORTHO05D028072 5.7e-13 78.2 128 40.6
BcaC01g01470 Brassica carinata HOM05D008709 ORTHO05D011440 8.2e-12 74.3 144 36.1
C03p92330 Brassica napus HOM05D008709 ORTHO05D011440 8.2e-12 74.3 144 36.1
C09p19360 Brassica napus HOM05D024654 ORTHO05D042960 8.2e-12 74.3 113 45.1
BolC3t21545H Brassica oleracea HOM05D008709 ORTHO05D011440 1.4e-11 73.6 144 36.1
AT2G16005 Arabidopsis thaliana HOM05D008709 ORTHO05D011440 7.0e-11 71.2 144 34.7
A06p22210 Brassica napus HOM05D002139 ORTHO05D002264 7.0e-11 71.2 151 31.1
Thhalv10010794m.g Eutrema salsugineum HOM05D002139 ORTHO05D002264 1.6e-10 70.1 151 29.1
BcaC01g02081 Brassica carinata HOM05D002139 ORTHO05D002264 4.5e-10 68.6 151 29.8
C03p68780 Brassica napus HOM05D002139 ORTHO05D002264 4.5e-10 68.6 151 29.8
BolC3t19132H Brassica oleracea HOM05D002139 ORTHO05D002264 4.5e-10 68.6 151 29.8
BcaB01g01201 Brassica carinata HOM05D002139 ORTHO05D002264 7.7e-10 67.8 151 29.8
CARHR148870 Cardamine hirsuta HOM05D013697 ORTHO05D015934 7.7e-10 67.8 94 40.4
AT1G45015 Arabidopsis thaliana HOM05D009123 ORTHO05D019748 1.0e-09 67.4 148 31.8
AL5G22100 Arabidopsis lyrata HOM05D002139 ORTHO05D002264 1.5e-08 63.5 151 30.5
AL7G42260 Arabidopsis lyrata HOM05D013697 ORTHO05D015934 2.5e-08 62.8 59 54.2
CARHR091170 Cardamine hirsuta HOM05D008709 ORTHO05D011440 4.2e-08 62.0 155 29.7
AT3G44100 Arabidopsis thaliana HOM05D002139 ORTHO05D002264 7.2e-08 61.2 156 29.5
BolC3t17089H Brassica oleracea HOM05D008709 ORTHO05D011440 3.6e-07 58.9 147 36.1
BraA03t13118Z Brassica rapa HOM05D008709 ORTHO05D011440 6.1e-07 58.2 147 36.1
Carub.0005s0985 Capsella rubella HOM05D002139 ORTHO05D002264 6.1e-07 58.2 151 27.8
BcaB04g18876 Brassica carinata HOM05D008709 ORTHO05D011440 1.0e-06 57.4 124 35.5
CARHR091160 Cardamine hirsuta HOM05D008709 ORTHO05D011440 1.0e-06 57.4 133 31.6
BcaC01g03838 Brassica carinata HOM05D008709 ORTHO05D011440 5.2e-06 55.1 114 39.5
C03p48080 Brassica napus HOM05D008709 ORTHO05D011440 5.2e-06 55.1 114 39.5
CARHR152880 Cardamine hirsuta HOM05D002139 ORTHO05D002264 5.2e-06 55.1 150 26.0


User provided reference genes

Program Settings