Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p21480 Brassica napus HOM05D009121 ORTHO05D001888 3.8e-91 338.2 174 100.0
BolC9t55053H Brassica oleracea HOM05D009121 ORTHO05D001888 1.4e-90 336.3 174 99.4
A09p17300 Brassica napus HOM05D009121 ORTHO05D001888 2.7e-89 332.0 174 97.7
BraA09t37359Z Brassica rapa HOM05D009121 ORTHO05D001888 2.7e-89 332.0 174 97.7
BcaNung05350 Brassica carinata HOM05D009121 ORTHO05D001888 9.3e-82 307.0 167 93.4
Sp2g04000 Schrenkiella parvula HOM05D009121 ORTHO05D001888 1.8e-56 223.0 165 69.1
Thhalv10024081m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 3.1e-53 212.2 167 65.3
AT1G60760 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 2.9e-51 205.7 163 63.8
AL2G15820 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 2.7e-49 199.1 163 62.0
Carub.0002s0459 Capsella rubella HOM05D009121 ORTHO05D001888 8.0e-49 197.6 164 61.6
CARHR051730 Cardamine hirsuta HOM05D009121 ORTHO05D001888 6.7e-48 194.5 169 60.4
BcaC05g24955 Brassica carinata HOM05D009121 ORTHO05D001888 7.5e-39 164.5 148 57.4
Aa31LG2G9780 Aethionema arabicum HOM05D009121 ORTHO05D001888 2.2e-38 162.9 154 54.5
BcaC07g38628 Brassica carinata HOM05D009121 ORTHO05D001888 4.1e-37 158.7 167 53.3
C05p09130 Brassica napus HOM05D009121 ORTHO05D001888 7.0e-37 157.9 148 55.4
BolC5t29657H Brassica oleracea HOM05D009121 ORTHO05D001888 7.0e-37 157.9 148 55.4
THA.LOC104809586 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 1.6e-36 156.8 157 52.2
A06p07570 Brassica napus HOM05D009121 ORTHO05D001888 1.0e-35 154.1 148 54.7
C08p48520 Brassica napus HOM05D009121 ORTHO05D001888 1.0e-35 154.1 151 53.0
BolC8t52391H Brassica oleracea HOM05D009121 ORTHO05D001888 1.0e-35 154.1 151 53.0
BraA06t23959Z Brassica rapa HOM05D009121 ORTHO05D001888 1.0e-35 154.1 148 54.7
A09p64670 Brassica napus HOM05D009121 ORTHO05D001888 2.2e-35 152.9 151 52.3
BraA09t41825Z Brassica rapa HOM05D009121 ORTHO05D001888 2.2e-35 152.9 151 52.3
Sp1g09470 Schrenkiella parvula HOM05D009121 ORTHO05D001888 2.9e-35 152.5 148 52.7
AL1G21700 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 5.0e-35 151.8 147 52.4
CARHR010990 Cardamine hirsuta HOM05D009121 ORTHO05D001888 5.0e-35 151.8 147 53.1
Thhalv10008932m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 1.9e-34 149.8 148 52.0
BcaB08g37374 Brassica carinata HOM05D009121 ORTHO05D001888 2.5e-34 149.4 151 51.0
Carub.0001s1032 Capsella rubella HOM05D009121 ORTHO05D001888 3.2e-34 149.1 146 52.1
AT1G10770 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 4.2e-34 148.7 147 51.0
THA.LOC104819351 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 2.3e-32 142.9 152 49.3
BcaC07g38589 Brassica carinata HOM05D009121 ORTHO05D001888 4.1e-29 132.1 167 47.3
Aa31LG1G4060 Aethionema arabicum HOM05D009121 ORTHO05D001888 4.4e-23 112.1 129 45.0
BolC8t49030H Brassica oleracea HOM05D009121 ORTHO05D001888 7.8e-12 74.7 94 45.7
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 5.0e-11 72.0 154 34.4
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 8.6e-11 71.2 133 34.6
Sed0022593 Sechium edule HOM05D008070 ORTHO05D001888 1.9e-10 70.1 131 33.6
CiPaw.05G184900 Carya illinoinensis HOM05D008070 ORTHO05D001888 3.3e-10 69.3 149 31.5
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 5.6e-10 68.6 131 36.6
Duzib251G0841 Durio zibethinus HOM05D008070 ORTHO05D001888 5.6e-10 68.6 157 32.5
COL.COLO4_24233 Corchorus olitorius HOM05D008070 ORTHO05D001888 7.3e-10 68.2 150 33.3
MELO3C010682.2 Cucumis melo HOM05D008070 ORTHO05D001888 6.2e-09 65.1 131 33.6
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 8.0e-09 64.7 148 28.4
TWI75G1444 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 1.4e-08 63.9 163 28.2
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 5.2e-08 62.0 131 32.8
MELO3C011974.2 Cucumis melo HOM05D008070 ORTHO05D001888 8.9e-08 61.2 155 28.4
Sp3g05640 Schrenkiella parvula HOM05D005742 ORTHO05D001888 2.0e-07 60.1 137 30.7
BNapus_Darmor_BZH_scaffold_118p00010 Brassica napus HOM05D005742 ORTHO05D001888 5.8e-07 58.5 156 28.2
BraA01t04423Z Brassica rapa HOM05D005742 ORTHO05D001888 5.8e-07 58.5 156 28.2
CiPaw.06G069400 Carya illinoinensis HOM05D008070 ORTHO05D001888 5.8e-07 58.5 164 32.3
Thhalv10022426m.g Eutrema salsugineum HOM05D005742 ORTHO05D001888 2.2e-06 56.6 147 27.2
BcaC09g47911 Brassica carinata HOM05D005742 ORTHO05D001888 2.9e-06 56.2 156 27.6
BolC1t05594H Brassica oleracea HOM05D005742 ORTHO05D001888 2.9e-06 56.2 156 27.6
C08p13970 Brassica napus HOM05D009121 ORTHO05D001888 3.7e-06 55.8 64 51.6
CARHR081260 Cardamine hirsuta HOM05D005742 ORTHO05D001888 3.7e-06 55.8 140 30.7
AL3G17770 Arabidopsis lyrata HOM05D005742 ORTHO05D001888 4.9e-06 55.5 136 28.7


User provided reference genes

Program Settings