Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p20760 Brassica napus HOM05D000101 ORTHO05D011607 1.2e-62 243.0 122 100.0
BcaC04g22316 Brassica carinata HOM05D000101 ORTHO05D000089 2.8e-24 115.5 69 82.6
Thhalv10023266m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 6.0e-19 97.8 66 69.7
Carub.0002s0396 Capsella rubella HOM05D000101 ORTHO05D000089 9.9e-14 80.5 106 45.3
A09p16870 Brassica napus HOM05D000101 ORTHO05D000089 1.3e-13 80.1 66 59.1
CARHR052080 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.3e-13 80.1 59 66.1
BcaNung02185 Brassica carinata HOM05D000101 ORTHO05D000089 2.9e-13 79.0 64 60.9
CARHR051470 Cardamine hirsuta HOM05D000101 ORTHO05D000089 3.8e-13 78.6 67 59.7
CARHR052140 Cardamine hirsuta HOM05D000101 ORTHO05D000089 3.8e-13 78.6 67 58.2
AL2G15160 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 6.4e-13 77.8 66 59.1
AT1G61190 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 6.4e-13 77.8 66 57.6
A03p62110 Brassica napus HOM05D000101 ORTHO05D000089 1.4e-12 76.6 64 59.4
BraA03t15249Z Brassica rapa HOM05D000101 ORTHO05D000089 1.4e-12 76.6 64 59.4
C07p59760 Brassica napus HOM05D000101 ORTHO05D000089 1.9e-12 76.3 64 59.4
BolC7t46422H Brassica oleracea HOM05D000101 ORTHO05D000089 1.9e-12 76.3 64 59.4
SpUn1045_0010 Schrenkiella parvula HOM05D000101 ORTHO05D000089 1.9e-12 76.3 66 59.1
Sp2g03280 Schrenkiella parvula HOM05D000101 ORTHO05D000089 3.2e-12 75.5 111 45.9
Thhalv10023257m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 4.2e-12 75.1 66 59.1
BcaNung02184 Brassica carinata HOM05D000101 ORTHO05D011607 5.4e-12 74.7 64 57.8
AT1G61310 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 3.5e-11 72.0 67 53.7
BcaNung05332 Brassica carinata HOM05D000101 ORTHO05D000089 3.5e-11 72.0 64 56.2
Sp2g03850 Schrenkiella parvula HOM05D000101 ORTHO05D000089 3.5e-11 72.0 66 56.1
Thhalv10023301m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 4.6e-11 71.6 66 57.6
AT1G61180 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 6.0e-11 71.2 64 56.2
BcaB07g31264 Brassica carinata HOM05D000101 ORTHO05D000089 3.0e-10 68.9 87 46.0
Thhalv10023258m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 3.0e-10 68.9 66 56.1
Carub.0002s0385 Capsella rubella HOM05D000101 ORTHO05D000089 3.3e-09 65.5 67 52.2
BraA09t37324Z Brassica rapa HOM05D000101 ORTHO05D000089 1.4e-07 60.1 66 47.0


User provided reference genes

Program Settings