Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 2.5e-71 271.9 133 100.0
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 1.3e-59 233.0 126 90.5
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 1.4e-58 229.6 126 88.9
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 1.7e-54 216.1 126 84.1
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 1.4e-53 213.0 126 83.3
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 4.4e-47 191.4 126 75.4
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 4.4e-47 191.4 126 75.4
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 4.4e-47 191.4 126 75.4
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 1.1e-45 186.8 126 72.2
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 3.1e-45 185.3 120 74.2
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 1.7e-43 179.5 126 73.8
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 5.0e-43 177.9 126 71.4
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 9.4e-42 173.7 126 71.4
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 9.4e-42 173.7 126 71.4
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 1.2e-41 173.3 126 70.6
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 1.2e-41 173.3 126 70.6
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 1.2e-41 173.3 126 71.4
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 6.1e-41 171.0 126 70.6
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 1.0e-40 170.2 120 70.8
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 1.0e-40 170.2 120 70.8
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 3.3e-39 165.2 120 70.0
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 7.4e-39 164.1 120 69.2
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 1.0e-32 143.7 74 94.6
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 2.4e-29 132.5 93 75.3
BraA09t39372Z Brassica rapa HOM05D007694 ORTHO05D018628 2.0e-28 129.4 80 78.8
A01p18710 Brassica napus HOM05D007694 ORTHO05D018628 5.0e-27 124.8 90 72.2
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 8.0e-25 117.5 121 52.1
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 2.3e-24 115.9 84 71.4
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 7.5e-23 110.9 121 49.6
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 7.5e-23 110.9 121 49.6
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 1.3e-22 110.2 121 49.6
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 1.4e-21 106.7 121 48.8
C05p39740 Brassica napus HOM05D007694 ORTHO05D039545 3.1e-21 105.5 66 78.8
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 5.4e-21 104.8 121 47.9
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 5.4e-21 104.8 121 47.9
BcaC05g27972 Brassica carinata HOM05D007694 ORTHO05D039545 7.0e-21 104.4 68 76.5
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 1.0e-19 100.5 114 50.9
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 2.3e-19 99.4 75 66.7
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 7.2e-18 94.4 109 48.6
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 6.8e-16 87.8 107 45.8
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 4.1e-13 78.6 77 53.2
BcaNung03237 Brassica carinata HOM05D007694 ORTHO05D092031 9.2e-13 77.4 61 67.2
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 9.2e-13 77.4 121 38.8
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 9.2e-13 77.4 121 38.8
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 2.3e-11 72.8 121 38.8
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 5.0e-11 71.6 74 52.7
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 8.6e-11 70.9 121 36.4
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 1.5e-10 70.1 74 51.4
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 1.9e-10 69.7 76 50.0
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 1.9e-10 69.7 76 50.0
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 4.3e-10 68.6 76 48.7
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 9.5e-10 67.4 74 50.0
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 1.6e-09 66.6 74 50.0
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 2.1e-09 66.2 74 50.0
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 2.1e-09 66.2 74 50.0
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 2.8e-09 65.9 61 52.5
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 6.1e-09 64.7 74 44.6
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 6.1e-09 64.7 74 44.6
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 6.1e-09 64.7 74 44.6
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 6.1e-09 64.7 74 44.6
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 2.3e-08 62.8 74 44.6
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 2.3e-08 62.8 74 44.6
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 6.8e-08 61.2 72 47.2
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 8.9e-08 60.8 53 58.5
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 1.5e-07 60.1 74 41.9
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 2.6e-07 59.3 53 56.6
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 2.6e-07 59.3 53 56.6
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 7.5e-07 57.8 53 54.7


User provided reference genes

Program Settings